Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236675.1_202017-07-
28] 6,578 sequences; 35,996,854 total letters
Query= NC_031224.1
Length=59443
Score E
Sequences producing significant alignments: (Bits) Value
seq5779 98.7 4e-16
>seq5779
Length=696
Score = 98.7 bits (108), Expect = 4e-16
Identities = 359/552 (65%), Gaps = 25/552 (5%)
Strand=Plus/Plus
Query 51724 TGCATAATGGTGTCGAGAAGGGGGATCGGACGGGTGTAGGTACTCGATCGGTTTTCGGCG 51783
|| |||| || || | ||||| || || || || || || | ||| ||||| |||
Sbjct 158 TGGATAACGGCGTGCATAAGGGAGACCGCACCGGAACGGGAACCCAATCTGTTTTTGGCA 217
Query 51784 CTCAACTTAGGTATGACCTGAGTAAGGGCTTCCCGCTCATCACCACCAAGAAGGTGCATT 51843
|| || | |||||||| | || |||||||| | || |||||| | |||
Sbjct 218 GACAGCTCCGATATGACCTATCCGAAGGGTTCCCGCTTGTAACAACCAAGCGAATCCATC 277
Query 51844 TCCCATCAGTGGTCGGGGAGTTGCTGTGGTTGCTTT---CGGGCTCTACGAACGTCAACG 51900
| |||||| | |||||| | ||||| ||| |||| |||||| | |
Sbjct 278 TGAAATCAGTCATTCATGAGTTGTTATGGTT--TTTGAGCGGGGA-TACGAATATATCCT 334
Query 51901 ATCTCCATAAGTACGGCGTCAGCATTTGGGACGAATGGGCGGATGAAAATGGTAACCTGG 51960
|||| | | | ||||| | || ||||| || ||||| || ||||||||| | |||
Sbjct 335 ATCTGAAGGAAAATGGCGTGAAGATCTGGGATGATTGGGCTGACGAAAATGGTGATTTGG 394
Query 51961 GTCCTGTGTATGGTAAGCAGTGGCGTAGTTGGGATGCTGG---TGGCGGCAAGGTCATCG 52017
|||| || || || || ||||| | |||||| || ||| | ||| || |
Sbjct 395 GTCCGGTATACGGATCTCAATGGCGCACTTGGGAAGCACCCAATGGAGAGAAG---ATTG 451
Query 52018 ATCAGATCCATGAAGTCGTCA---AATCAATTAAGAACGATCCTGATAGTCGACGGCACA 52074
||||||| || || || | | |||||||| ||| |||| ||| ||||| |||
Sbjct 452 ATCAGAT---TGCAGCTGTAATTGATTCAATTAAAAACAATCCGGATTCACGACGTCACC 508
Query 52075 TTGTCTCTGCTTGGAATGTGGGTGATTTGGATGATATGGCGTTGGCTCCCTGCCATACAC 52134
| || || |||||||||| || | | | ||| || | || ||||||
Sbjct 509 TCGTTAGCGCCTGGAATGTGGCGGAGATTAACAACATGAAACTGCCCCCTTGCCATTTCG 568
Query 52135 TATTCCAATTCTATGTAGCTGAAGGTAAGCTTTCGTGCCATTTG-TATCA--GCGGTCTG 52191
|| || || || || ||||| ||||| || || || | || | || ||| || |
Sbjct 569 CGTTTCAGTTTTACGTGGCTGAGGGTAAACTATCATG---TATGCTCACAATGCGTTCCG 625
Query 52192 CCGACATGTTCTTGGGCGTTCCGTTTAACATTGCCAGCTATTCCTTGCTGACGCATCTGA 52251
|| | |||| |||| | || |||||||||||||||||| | ||| |||| ||| |||
Sbjct 626 TGGATACGTTCCTGGGGCTGCCATTTAACATTGCCAGCTATGCATTGTTGACACATATGA 685
Query 52252 TTGCTCGAGCAG 52263
|||| | |||||
Sbjct 686 TTGC-CCAGCAG 696
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 190081150888580
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |