Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236675.1_202017-07- 28] 6,578 sequences; 35,996,854 total letters Query= NC_031224.1 Length=59443 Score E Sequences producing significant alignments: (Bits) Value seq5779 98.7 4e-16 >seq5779 Length=696 Score = 98.7 bits (108), Expect = 4e-16 Identities = 359/552 (65%), Gaps = 25/552 (5%) Strand=Plus/Plus Query 51724 TGCATAATGGTGTCGAGAAGGGGGATCGGACGGGTGTAGGTACTCGATCGGTTTTCGGCG 51783 || |||| || || | ||||| || || || || || || | ||| ||||| ||| Sbjct 158 TGGATAACGGCGTGCATAAGGGAGACCGCACCGGAACGGGAACCCAATCTGTTTTTGGCA 217 Query 51784 CTCAACTTAGGTATGACCTGAGTAAGGGCTTCCCGCTCATCACCACCAAGAAGGTGCATT 51843 || || | |||||||| | || |||||||| | || |||||| | ||| Sbjct 218 GACAGCTCCGATATGACCTATCCGAAGGGTTCCCGCTTGTAACAACCAAGCGAATCCATC 277 Query 51844 TCCCATCAGTGGTCGGGGAGTTGCTGTGGTTGCTTT---CGGGCTCTACGAACGTCAACG 51900 | |||||| | |||||| | ||||| ||| |||| |||||| | | Sbjct 278 TGAAATCAGTCATTCATGAGTTGTTATGGTT--TTTGAGCGGGGA-TACGAATATATCCT 334 Query 51901 ATCTCCATAAGTACGGCGTCAGCATTTGGGACGAATGGGCGGATGAAAATGGTAACCTGG 51960 |||| | | | ||||| | || ||||| || ||||| || ||||||||| | ||| Sbjct 335 ATCTGAAGGAAAATGGCGTGAAGATCTGGGATGATTGGGCTGACGAAAATGGTGATTTGG 394 Query 51961 GTCCTGTGTATGGTAAGCAGTGGCGTAGTTGGGATGCTGG---TGGCGGCAAGGTCATCG 52017 |||| || || || || ||||| | |||||| || ||| | ||| || | Sbjct 395 GTCCGGTATACGGATCTCAATGGCGCACTTGGGAAGCACCCAATGGAGAGAAG---ATTG 451 Query 52018 ATCAGATCCATGAAGTCGTCA---AATCAATTAAGAACGATCCTGATAGTCGACGGCACA 52074 ||||||| || || || | | |||||||| ||| |||| ||| ||||| ||| Sbjct 452 ATCAGAT---TGCAGCTGTAATTGATTCAATTAAAAACAATCCGGATTCACGACGTCACC 508 Query 52075 TTGTCTCTGCTTGGAATGTGGGTGATTTGGATGATATGGCGTTGGCTCCCTGCCATACAC 52134 | || || |||||||||| || | | | ||| || | || |||||| Sbjct 509 TCGTTAGCGCCTGGAATGTGGCGGAGATTAACAACATGAAACTGCCCCCTTGCCATTTCG 568 Query 52135 TATTCCAATTCTATGTAGCTGAAGGTAAGCTTTCGTGCCATTTG-TATCA--GCGGTCTG 52191 || || || || || ||||| ||||| || || || | || | || ||| || | Sbjct 569 CGTTTCAGTTTTACGTGGCTGAGGGTAAACTATCATG---TATGCTCACAATGCGTTCCG 625 Query 52192 CCGACATGTTCTTGGGCGTTCCGTTTAACATTGCCAGCTATTCCTTGCTGACGCATCTGA 52251 || | |||| |||| | || |||||||||||||||||| | ||| |||| ||| ||| Sbjct 626 TGGATACGTTCCTGGGGCTGCCATTTAACATTGCCAGCTATGCATTGTTGACACATATGA 685 Query 52252 TTGCTCGAGCAG 52263 |||| | ||||| Sbjct 686 TTGC-CCAGCAG 696 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 190081150888580