Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236675.1_202017-07- 28] 6,578 sequences; 35,996,854 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq1041 105 2e-17 >seq1041 Length=763809 Score = 105 bits (116), Expect = 2e-17 Identities = 149/208 (72%), Gaps = 1/208 (0%) Strand=Plus/Minus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| || ||||| ||||| || |||||||||||||| | | || | || || || | Sbjct 709409 CAAG-TGCAGAGTGGACTCCTTCTGGATGTTGTAATCCGAAAGTGTCCGGCCGTCCTCAA 709351 Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016 | || ||||||||||| || | ||||||||||| | ||| || ||||| ||||| | Sbjct 709350 GCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCCGGTGGGATGCCCTCCTTGTCTTGGA 709291 Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076 | ||| ||||| | || | |||| || || ||||| || || || || |||| Sbjct 709290 TCTTTGACTTGACGTTGTCGATCGTGTCGGATGATTCCACTTCGAGTGTGATGGTCTTGC 709231 Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCAT 152104 | ||||| ||||| ||||| | ||||| Sbjct 709230 CGGTGAGTGTCTTGACGAAAATTTGCAT 709203 Score = 100 bits (110), Expect = 7e-16 Identities = 150/210 (71%), Gaps = 5/210 (2%) Strand=Plus/Minus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| || ||||| || ||||| ||||||||||| || | | ||| | ||||| || | Sbjct 709181 CAAG-TGGAGAGTCGATTCTTTCTGGATGTTGTAGTCCGACAGAGTACGACCATCCTCGA 709123 Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016 | || || || || || || | ||||||||| | | ||| || ||||| || || | Sbjct 709122 GCTGCTTGCCTGCAAAAATCAGGCGCTGCTGGTCAGGTGGGATACCCTCCTTGTCCTGGA 709063 Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTC--TGAACTCTCTACTTCAAGAGTAATAGTTTT 152074 | || |||||| | || | | |||| || |||| || || || || || || || Sbjct 709062 TCTTCGACTTGACATTGTCGATGGTGTCGCTGGACTCG--ACCTCGAGGGTGATGGTCTT 709005 Query 152075 GCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 ||| ||||||||||| ||||||| |||||| Sbjct 709004 GCCGGTGAGAGTCTTGACGAAGATCTGCAT 708975 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153723555261838