Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236675.1_202017-07- 28] 6,578 sequences; 35,996,854 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq1041 159 7e-34 seq5876 116 8e-21 seq1051 114 3e-20 seq1946 113 9e-20 seq6250 111 3e-19 seq5553 109 1e-18 >seq1041 Length=763809 Score = 159 bits (176), Expect = 7e-34 Identities = 172/228 (75%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||| || ||||| |||| || | || |||||| |||||||||||||| | Sbjct 709202 ACCACCACGGAGACGAAGCACCAAGTGGAGAGTCGATTCTTTCTGGATGTTGTAGTCCGA 709143 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || || || |||||||| || || || || ||||| |||| || || |||||| || Sbjct 709142 CAGAGTACGACCATCCTCGAGCTGCTTGCCTGCAAAAATCAGGCGCTGCTGGTCAGGTGG 709083 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 |||||||||||||| |||||||| | || || | ||||| ||||| | ||||| Sbjct 709082 GATACCCTCCTTGTCCTGGATCTTCGACTTGACATTGTCGATGGTGTCGCTGGACTCGAC 709023 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||||| ||||| ||||| || || | |||||| ||||| |||||||| Sbjct 709022 CTCGAGGGTGATGGTCTTGCCGGTGAGAGTCTTGACGAAGATCTGCAT 708975 Score = 158 bits (174), Expect = 3e-33 Identities = 171/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 || ||||| || || || |||| || | ||| || || ||||||||||| || | | Sbjct 709429 CCTCCACGGAGACGCAGCACCAAGTGCAGAGTGGACTCCTTCTGGATGTTGTAATCCGAA 709370 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || || ||||| ||||| || || || ||||| ||||| | ||| || ||||| || Sbjct 709369 AGTGTCCGGCCGTCCTCAAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCCGGTGGG 709310 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 || |||||||||||||||||||||| || ||| | ||||| ||||| || | ||| ||| Sbjct 709309 ATGCCCTCCTTGTCTTGGATCTTTGACTTGACGTTGTCGATCGTGTCGGATGATTCCACT 709250 Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||||| ||||| ||||| || || | ||||| ||||| || ||||| Sbjct 709249 TCGAGTGTGATGGTCTTGCCGGTGAGTGTCTTGACGAAAATTTGCAT 709203 Score = 129 bits (142), Expect = 1e-24 Identities = 153/205 (75%), Gaps = 2/205 (1%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||| || || || || ||||| | ||||| || || || ||||||||||| | Sbjct 708974 ACCACCACGAAGACGGAGGACGAGATGGAGAGTGCTCTCCTTCTGAATGTTGTAGTCGGA 708915 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || ||||| || ||||| || || || || || || ||||| ||||| |||||| || Sbjct 708914 CAGGGTGCGACCGTCCTCGAGCTGCTTGCCTGCGAAAATCAAGCGTTGCTGGTCAGGTGG 708855 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCT-TTTACGGTATCGATAGTGTCCGAAGCTTCGA 283050 ||| || ||||| || |||||| ||||| || || | ||||| ||||| || | || | Sbjct 708854 AATGCCTTCCTTATCCTGGATC-TTGCTCTTCACATTGTCGATGGTGTCGGACGACTCAA 708796 Query 283051 CTTCGAGAGTGATCGTCTTACCCGT 283075 | ||||| || || ||||| || || Sbjct 708795 CCTCGAGGGTAATGGTCTTGCCGGT 708771 >seq5876 Length=784347 Score = 116 bits (128), Expect = 8e-21 Identities = 111/141 (79%), Gaps = 1/141 (1%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 |||||||||||| || || || || || | ||||| || || || ||||||||||| | Sbjct 203436 ACCACCACGCAGACGGAGGACGAGGTGGAGGGTGCTCTCCTTCTGAATGTTGTAGTCGGA 203377 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || |||||||||||||| || || || ||||| |||||||| || || ||||| || Sbjct 203376 GAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCCGGTGG 203317 Query 282992 AATACCCTCCTTGTCT-TGGA 283011 ||| |||||||||||| |||| Sbjct 203316 AATTCCCTCCTTGTCTGTGGA 203296 >seq1051 Length=501590 Score = 114 bits (126), Expect = 3e-20 Identities = 135/180 (75%), Gaps = 2/180 (1%) Strand=Plus/Plus Query 282912 TTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATC 282971 || |||||||||||||| | || ||||| |||||||| | || || || || |||||| Sbjct 97041 TTCTGGATGTTGTAGTCGGAGAGGGTGCGACCATCCTCCAACTGCTTTCCAGCGAAGATC 97100 Query 282972 AAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCT-TTTACGGTATC 283030 ||||| || ||||| || || ||||||||||| |||||| ||||| || || | || Sbjct 97101 AAACGCTGCTGGTCCGGTGGGATTCCCTCCTTGTCCTGGATC-TTGCTCTTGACATTGTC 97159 Query 283031 GATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAA 283090 ||| ||||| | ||||| ||||| ||||| ||||| || || | | ||| ||||| Sbjct 97160 GATGGTGTCGCTCGACTCGACCTCGAGCGTGATGGTCTTGCCAGTGAGGGCCTTTACGAA 97219 >seq1946 Length=5459 Score = 113 bits (124), Expect = 9e-20 Identities = 341/513 (66%), Gaps = 18/513 (4%) Strand=Plus/Plus Query 301402 CGATGCTTAAAGATAGCGATGCTTAAAATGGACCCCTATATCAACGTCGATCCGGGGACG 301461 ||| | || ||| || | || | ||| | || || || ||||| |||| ||||| || Sbjct 72 CGAGGGTTGAAGGTAACCATTCAAAAATTTGATCCATACATCAATATCGACCCGGGAACA 131 Query 301462 ATGAGCCCGACTCAACATGGAGAAGTGTTCGTGACGGATGATGGTGCTGAAACCGATCTG 301521 ||||| || ||| ||||| || ||||| || ||||||||||| || ||||| ||||| Sbjct 132 ATGAGTCCTTATCAGCATGGTGAGGTGTTTGTAACGGATGATGGCGCGGAAACGGATCTT 191 Query 301522 GATCTGGGGCACTACGAACGTTTCACT-TCATTAACC-CTTAAGCGTGAAAGTAATTTTA 301579 || || || |||||||||||||| | | ||| |||| || | | || || | | Sbjct 192 GACCTTGGCCACTACGAACGTTTTATTGACATCAACCTCTCCA--AAAACAGCAACGTCA 249 Query 301580 CGACTGGCCAAGTTTATTTAAAAGTTATCGAAAATGAAC-GCGAAGGTAGCTATCTCGGA 301638 ||||||| |||| || | || ||| || || | ||| || | ||||| || Sbjct 250 CGACTGGTAAAGTATACTCCTCCGTCATCAGCAAAGAGCGGCGCGGGGA-ATATCTGGGC 308 Query 301639 AAGACGGTGCAAGTTGTTCCCCACATCACCGATGAAATCAAA-AG-AAGAATT---CACA 301693 ||||| ||||| |||| |||||||| | || |||||| || | ||| | || Sbjct 309 GGAACGGTACAAGTCATTCCACACATCACGAACGAGATCAAAGAGCGTGTATTCCGCGCA 368 Query 301694 TTGCGGCTGAA---AAATCAGATATACTTATTGGAGAAATTGGAGGAACGGTCGGAGATA 301750 || |||| || ||| | ||||| || ||||| || ||||| || || | Sbjct 369 GGACG--TGAAGCGGGTTCGGATGTCGTTATTACGGAGATTGGCGGTACGGTGGGTGACA 426 Query 301751 TCGAATCGCTT-CCTTTTATAGAAGCGATTCGTCAACTCTCTCATGACGAAGGAACGGCC 301809 ||||| |||| ||||| | ||||| ||||||||| || ||| | ||| | | Sbjct 427 TCGAA-AGCTTGCCTTTCCTGGAAGCTATTCGTCAAATCAAGAGTGATGTAGGTCGTGAC 485 Query 301810 AATGTTCTGTTCATTCATCTCGTGCTCTTACCCTATATAGCGACTGCTGGTGAGTTGAAA 301869 || || ||| ||| ||| | || | || || || | |||||||||| ||||| Sbjct 486 AACGTCATGTACATCCATGTAACACTTATCCCTTACATCAAGGCTGCTGGTGAAGTGAAA 545 Query 301870 TCAAAGCCAGCACAGCATTCGGTTAAAGAATTG 301902 | || ||| | ||||| || || |||||| Sbjct 546 ACCAAACCAACTCAGCACAGTGTGAAGGAATTG 578 >seq6250 Length=1047362 Score = 111 bits (122), Expect = 3e-19 Identities = 251/377 (67%), Gaps = 3/377 (1%) Strand=Plus/Minus Query 312486 CGCCCCCACTTGACACCGTTGACAATTGACTCGAAGTCATCGTTCAGGATAACGATATCG 312545 || |||||| | | | | ||||| || || |||||| |||| || | || ||| ||| Sbjct 265943 CGTCCCCACATCAAAGCCTTGACGATCGAGGCGAAGTTGTCGTCCATCAAAATGATGTCG 265884 Query 312546 GCTGCTTCCTTTGCAATGTCTGT---ACCACTCCCCATTGCACACCCGACGTCTGCTTCC 312602 | ||||||||||| | ||||| | || | ||| ||| ||||||| || || || Sbjct 265883 GAGGCTTCCTTTGCGACTTCTGTGCCAGCAATGTTCATGGCAAACCCGACATCAGCAGCC 265824 Query 312603 TTAAGAGCCGGGGCGTCGTTAGCACCATCGCCACTCGATGCGACGACGTGGCCAAGGGCC 312662 || || || || |||||||| | |||||| ||| | |||||| | ||| | | Sbjct 265823 TTTAGGGCAGGAGCGTCGTTGGTACCATCTCCAGTGACAGCGACGGTCTCGCCCATCTCT 265764 Query 312663 TTCATGAGCTGAACCAACTTATACTTATCCTCTGGGGATGAACGGGCAAGAACTTTCAGC 312722 |||| | ||| ||||| | | ||| || || || || || || || ||||| | ||| Sbjct 265763 TTCAGGCGCTTGACCAAGGTCTTCTTGTCGTCGGGAGAAGATCGCGCGAGAACCTGCAGT 265704 Query 312723 TTAGGTGCGATGGCAACCTGTTCATCGTTACTCATTGCCCGGAATTCCTTACCTTCAATG 312782 || || ||| || ||| ||| || ||||| ||||||||| |||||| | Sbjct 265703 TTTGGAATGATAGCCTTCTGCTCAGTCTTGCTCATCTTGCGGAATTCCGGACCTTCGAGT 265644 Query 312783 GCGATATCCCCGTGCTTCAGCATACCGATTTCACTGGCAATGTGCTTCGCCGTCTGGATG 312842 || | | | || | | | || || || ||||||| ||| |||||| | ||| Sbjct 265643 GCAACACCACCTGGGGTGAAGATGCCACACTCGGTGGCAATAGCCTTTGCCGTCAGAATG 265584 Query 312843 TTATCACCGGTAACCAT 312859 || || || |||||||| Sbjct 265583 TTGTCTCCAGTAACCAT 265567 >seq5553 Length=468990 Score = 109 bits (120), Expect = 1e-18 Identities = 156/220 (71%), Gaps = 0/220 (0%) Strand=Plus/Plus Query 230191 AGGAGTTCATTTGCGACGCTATTCCTTGCCGTCTTATCGGCATGAATGCTGATCTCATGG 230250 |||||||| | |||||| |||| ||| ||| | || ||||| |||| |||||| Sbjct 198896 AGGAGTTCTTGACAGACGCTCTTCCATGCAAGCTTCTGGGGATGAACGCTGGCCTCATGT 198955 Query 230251 GGCAATATATCGAATTCGTAGCTGATCGTATTTTCGTGGCGCTAGGGTACGAGAAAGTGT 230310 ||||| || |||||||| || ||||| | | | || || || || |||| | | Sbjct 198956 CACAATACATTGAATTCGTCGCCGATCGCCTACTGTTAGCACTCGGCAACAAGAAGTTCT 199015 Query 230311 ATAACTCCAAGAACCCCTTCGCTTTTATGGAGCTCATTTCACTCCAGGGGAAAACTAACT 230370 | ||| ||| |||||||||| || |||||| |||||| || || || || |||| Sbjct 199016 ACAACGCCACCAACCCCTTCGACTTCATGGAGAACATTTCGCTGGGCGGCAAGACCAACT 199075 Query 230371 TCTTCGAAAAGCGTGTCAGCGATTATCAAAGGCCCGGTGT 230410 ||||||| |||||||| |||| || || | | | ||||| Sbjct 199076 TCTTCGAGAAGCGTGTTGGCGAGTACCAGAAGGCTGGTGT 199115 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046650980166012