Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236675.1_202017-07-
28] 6,578 sequences; 35,996,854 total letters
Query= NC_032001.1
Length=327147
Score E
Sequences producing significant alignments: (Bits) Value
seq1041 159 7e-34
seq5876 116 8e-21
seq1051 114 3e-20
seq1946 113 9e-20
seq6250 111 3e-19
seq5553 109 1e-18
>seq1041
Length=763809
Score = 159 bits (176), Expect = 7e-34
Identities = 172/228 (75%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
||||||||| || ||||| |||| || | || |||||| |||||||||||||| |
Sbjct 709202 ACCACCACGGAGACGAAGCACCAAGTGGAGAGTCGATTCTTTCTGGATGTTGTAGTCCGA 709143
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
|| || || |||||||| || || || || ||||| |||| || || |||||| ||
Sbjct 709142 CAGAGTACGACCATCCTCGAGCTGCTTGCCTGCAAAAATCAGGCGCTGCTGGTCAGGTGG 709083
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051
|||||||||||||| |||||||| | || || | ||||| ||||| | |||||
Sbjct 709082 GATACCCTCCTTGTCCTGGATCTTCGACTTGACATTGTCGATGGTGTCGCTGGACTCGAC 709023
Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
||||| ||||| ||||| || || | |||||| ||||| ||||||||
Sbjct 709022 CTCGAGGGTGATGGTCTTGCCGGTGAGAGTCTTGACGAAGATCTGCAT 708975
Score = 158 bits (174), Expect = 3e-33
Identities = 171/227 (75%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932
|| ||||| || || || |||| || | ||| || || ||||||||||| || | |
Sbjct 709429 CCTCCACGGAGACGCAGCACCAAGTGCAGAGTGGACTCCTTCTGGATGTTGTAATCCGAA 709370
Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992
|| || ||||| ||||| || || || ||||| ||||| | ||| || ||||| ||
Sbjct 709369 AGTGTCCGGCCGTCCTCAAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCCGGTGGG 709310
Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052
|| |||||||||||||||||||||| || ||| | ||||| ||||| || | ||| |||
Sbjct 709309 ATGCCCTCCTTGTCTTGGATCTTTGACTTGACGTTGTCGATCGTGTCGGATGATTCCACT 709250
Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
||||| ||||| ||||| || || | ||||| ||||| || |||||
Sbjct 709249 TCGAGTGTGATGGTCTTGCCGGTGAGTGTCTTGACGAAAATTTGCAT 709203
Score = 129 bits (142), Expect = 1e-24
Identities = 153/205 (75%), Gaps = 2/205 (1%)
Strand=Plus/Minus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
||||||||| || || || || ||||| | ||||| || || || ||||||||||| |
Sbjct 708974 ACCACCACGAAGACGGAGGACGAGATGGAGAGTGCTCTCCTTCTGAATGTTGTAGTCGGA 708915
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
|| ||||| || ||||| || || || || || || ||||| ||||| |||||| ||
Sbjct 708914 CAGGGTGCGACCGTCCTCGAGCTGCTTGCCTGCGAAAATCAAGCGTTGCTGGTCAGGTGG 708855
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCT-TTTACGGTATCGATAGTGTCCGAAGCTTCGA 283050
||| || ||||| || |||||| ||||| || || | ||||| ||||| || | || |
Sbjct 708854 AATGCCTTCCTTATCCTGGATC-TTGCTCTTCACATTGTCGATGGTGTCGGACGACTCAA 708796
Query 283051 CTTCGAGAGTGATCGTCTTACCCGT 283075
| ||||| || || ||||| || ||
Sbjct 708795 CCTCGAGGGTAATGGTCTTGCCGGT 708771
>seq5876
Length=784347
Score = 116 bits (128), Expect = 8e-21
Identities = 111/141 (79%), Gaps = 1/141 (1%)
Strand=Plus/Minus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
|||||||||||| || || || || || | ||||| || || || ||||||||||| |
Sbjct 203436 ACCACCACGCAGACGGAGGACGAGGTGGAGGGTGCTCTCCTTCTGAATGTTGTAGTCGGA 203377
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
|| |||||||||||||| || || || ||||| |||||||| || || ||||| ||
Sbjct 203376 GAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCCGGTGG 203317
Query 282992 AATACCCTCCTTGTCT-TGGA 283011
||| |||||||||||| ||||
Sbjct 203316 AATTCCCTCCTTGTCTGTGGA 203296
>seq1051
Length=501590
Score = 114 bits (126), Expect = 3e-20
Identities = 135/180 (75%), Gaps = 2/180 (1%)
Strand=Plus/Plus
Query 282912 TTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATC 282971
|| |||||||||||||| | || ||||| |||||||| | || || || || ||||||
Sbjct 97041 TTCTGGATGTTGTAGTCGGAGAGGGTGCGACCATCCTCCAACTGCTTTCCAGCGAAGATC 97100
Query 282972 AAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCT-TTTACGGTATC 283030
||||| || ||||| || || ||||||||||| |||||| ||||| || || | ||
Sbjct 97101 AAACGCTGCTGGTCCGGTGGGATTCCCTCCTTGTCCTGGATC-TTGCTCTTGACATTGTC 97159
Query 283031 GATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAA 283090
||| ||||| | ||||| ||||| ||||| ||||| || || | | ||| |||||
Sbjct 97160 GATGGTGTCGCTCGACTCGACCTCGAGCGTGATGGTCTTGCCAGTGAGGGCCTTTACGAA 97219
>seq1946
Length=5459
Score = 113 bits (124), Expect = 9e-20
Identities = 341/513 (66%), Gaps = 18/513 (4%)
Strand=Plus/Plus
Query 301402 CGATGCTTAAAGATAGCGATGCTTAAAATGGACCCCTATATCAACGTCGATCCGGGGACG 301461
||| | || ||| || | || | ||| | || || || ||||| |||| ||||| ||
Sbjct 72 CGAGGGTTGAAGGTAACCATTCAAAAATTTGATCCATACATCAATATCGACCCGGGAACA 131
Query 301462 ATGAGCCCGACTCAACATGGAGAAGTGTTCGTGACGGATGATGGTGCTGAAACCGATCTG 301521
||||| || ||| ||||| || ||||| || ||||||||||| || ||||| |||||
Sbjct 132 ATGAGTCCTTATCAGCATGGTGAGGTGTTTGTAACGGATGATGGCGCGGAAACGGATCTT 191
Query 301522 GATCTGGGGCACTACGAACGTTTCACT-TCATTAACC-CTTAAGCGTGAAAGTAATTTTA 301579
|| || || |||||||||||||| | | ||| |||| || | | || || | |
Sbjct 192 GACCTTGGCCACTACGAACGTTTTATTGACATCAACCTCTCCA--AAAACAGCAACGTCA 249
Query 301580 CGACTGGCCAAGTTTATTTAAAAGTTATCGAAAATGAAC-GCGAAGGTAGCTATCTCGGA 301638
||||||| |||| || | || ||| || || | ||| || | ||||| ||
Sbjct 250 CGACTGGTAAAGTATACTCCTCCGTCATCAGCAAAGAGCGGCGCGGGGA-ATATCTGGGC 308
Query 301639 AAGACGGTGCAAGTTGTTCCCCACATCACCGATGAAATCAAA-AG-AAGAATT---CACA 301693
||||| ||||| |||| |||||||| | || |||||| || | ||| | ||
Sbjct 309 GGAACGGTACAAGTCATTCCACACATCACGAACGAGATCAAAGAGCGTGTATTCCGCGCA 368
Query 301694 TTGCGGCTGAA---AAATCAGATATACTTATTGGAGAAATTGGAGGAACGGTCGGAGATA 301750
|| |||| || ||| | ||||| || ||||| || ||||| || || |
Sbjct 369 GGACG--TGAAGCGGGTTCGGATGTCGTTATTACGGAGATTGGCGGTACGGTGGGTGACA 426
Query 301751 TCGAATCGCTT-CCTTTTATAGAAGCGATTCGTCAACTCTCTCATGACGAAGGAACGGCC 301809
||||| |||| ||||| | ||||| ||||||||| || ||| | ||| | |
Sbjct 427 TCGAA-AGCTTGCCTTTCCTGGAAGCTATTCGTCAAATCAAGAGTGATGTAGGTCGTGAC 485
Query 301810 AATGTTCTGTTCATTCATCTCGTGCTCTTACCCTATATAGCGACTGCTGGTGAGTTGAAA 301869
|| || ||| ||| ||| | || | || || || | |||||||||| |||||
Sbjct 486 AACGTCATGTACATCCATGTAACACTTATCCCTTACATCAAGGCTGCTGGTGAAGTGAAA 545
Query 301870 TCAAAGCCAGCACAGCATTCGGTTAAAGAATTG 301902
| || ||| | ||||| || || ||||||
Sbjct 546 ACCAAACCAACTCAGCACAGTGTGAAGGAATTG 578
>seq6250
Length=1047362
Score = 111 bits (122), Expect = 3e-19
Identities = 251/377 (67%), Gaps = 3/377 (1%)
Strand=Plus/Minus
Query 312486 CGCCCCCACTTGACACCGTTGACAATTGACTCGAAGTCATCGTTCAGGATAACGATATCG 312545
|| |||||| | | | | ||||| || || |||||| |||| || | || ||| |||
Sbjct 265943 CGTCCCCACATCAAAGCCTTGACGATCGAGGCGAAGTTGTCGTCCATCAAAATGATGTCG 265884
Query 312546 GCTGCTTCCTTTGCAATGTCTGT---ACCACTCCCCATTGCACACCCGACGTCTGCTTCC 312602
| ||||||||||| | ||||| | || | ||| ||| ||||||| || || ||
Sbjct 265883 GAGGCTTCCTTTGCGACTTCTGTGCCAGCAATGTTCATGGCAAACCCGACATCAGCAGCC 265824
Query 312603 TTAAGAGCCGGGGCGTCGTTAGCACCATCGCCACTCGATGCGACGACGTGGCCAAGGGCC 312662
|| || || || |||||||| | |||||| ||| | |||||| | ||| | |
Sbjct 265823 TTTAGGGCAGGAGCGTCGTTGGTACCATCTCCAGTGACAGCGACGGTCTCGCCCATCTCT 265764
Query 312663 TTCATGAGCTGAACCAACTTATACTTATCCTCTGGGGATGAACGGGCAAGAACTTTCAGC 312722
|||| | ||| ||||| | | ||| || || || || || || || ||||| | |||
Sbjct 265763 TTCAGGCGCTTGACCAAGGTCTTCTTGTCGTCGGGAGAAGATCGCGCGAGAACCTGCAGT 265704
Query 312723 TTAGGTGCGATGGCAACCTGTTCATCGTTACTCATTGCCCGGAATTCCTTACCTTCAATG 312782
|| || ||| || ||| ||| || ||||| ||||||||| |||||| |
Sbjct 265703 TTTGGAATGATAGCCTTCTGCTCAGTCTTGCTCATCTTGCGGAATTCCGGACCTTCGAGT 265644
Query 312783 GCGATATCCCCGTGCTTCAGCATACCGATTTCACTGGCAATGTGCTTCGCCGTCTGGATG 312842
|| | | | || | | | || || || ||||||| ||| |||||| | |||
Sbjct 265643 GCAACACCACCTGGGGTGAAGATGCCACACTCGGTGGCAATAGCCTTTGCCGTCAGAATG 265584
Query 312843 TTATCACCGGTAACCAT 312859
|| || || ||||||||
Sbjct 265583 TTGTCTCCAGTAACCAT 265567
>seq5553
Length=468990
Score = 109 bits (120), Expect = 1e-18
Identities = 156/220 (71%), Gaps = 0/220 (0%)
Strand=Plus/Plus
Query 230191 AGGAGTTCATTTGCGACGCTATTCCTTGCCGTCTTATCGGCATGAATGCTGATCTCATGG 230250
|||||||| | |||||| |||| ||| ||| | || ||||| |||| ||||||
Sbjct 198896 AGGAGTTCTTGACAGACGCTCTTCCATGCAAGCTTCTGGGGATGAACGCTGGCCTCATGT 198955
Query 230251 GGCAATATATCGAATTCGTAGCTGATCGTATTTTCGTGGCGCTAGGGTACGAGAAAGTGT 230310
||||| || |||||||| || ||||| | | | || || || || |||| | |
Sbjct 198956 CACAATACATTGAATTCGTCGCCGATCGCCTACTGTTAGCACTCGGCAACAAGAAGTTCT 199015
Query 230311 ATAACTCCAAGAACCCCTTCGCTTTTATGGAGCTCATTTCACTCCAGGGGAAAACTAACT 230370
| ||| ||| |||||||||| || |||||| |||||| || || || || ||||
Sbjct 199016 ACAACGCCACCAACCCCTTCGACTTCATGGAGAACATTTCGCTGGGCGGCAAGACCAACT 199075
Query 230371 TCTTCGAAAAGCGTGTCAGCGATTATCAAAGGCCCGGTGT 230410
||||||| |||||||| |||| || || | | | |||||
Sbjct 199076 TCTTCGAGAAGCGTGTTGGCGAGTACCAGAAGGCTGGTGT 199115
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1046650980166012
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |