Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236685.1_202017-07-
28] 143 sequences; 29,909,557 total letters
Query= NC_001132.2
Length=161773
Score E
Sequences producing significant alignments: (Bits) Value
seq11 170 2e-37
>seq11
Length=1109632
Score = 170 bits (188), Expect = 2e-37
Identities = 478/724 (66%), Gaps = 16/724 (2%)
Strand=Plus/Minus
Query 16676 TGGTAATCGCTAACGCGTTTTTCGAAAAAGTTAGTTTTGCCCTCTAGAGATATATTCTCC 16735
||||| |||| ||| || || ||||| ||||| || ||||| | || || || ||||||
Sbjct 843104 TGGTACTCGCCAACACGCTTCTCGAAGAAGTTGGTCTTGCCGCCCAGCGAAATGTTCTCC 843045
Query 16736 ATGAAATCAAAAGGATTAGTAGC--TGAAAATATTTTAGAGTACCCCAGTTCGGCGATTA 16793
||||| || || || || || || || | | || | | | || ||| | | ||
Sbjct 843044 ATGAAGTCGAAGGGGTTGGTGGCGTTGTAGAACTTCTTG--TTGCCGAGTGCCAACAGTA 842987
Query 16794 ATCTATCCGCTACAAATTCTATATATTGGCACATTAATTCGCAGTTCATTCCTATAAGAC 16853
| ||| || || ||||| || ||||| |||| | | |||||| || | ||| |
Sbjct 842986 GGCGATCGGCGACGAATTCAATGTATTGTGACATGAGGCCAGCGTTCATCCCCAGAAG-C 842928
Query 16854 GTACC-GGAAGAGCTTCCGTCAAAAATCGTTGCTCTATAACAACCGCTTCCTTAATAATA 16912
| | |||||||| || ||||| || ||||| || || || || | || ||
Sbjct 842927 TTGCATGGAAGAGCGTCTGTCAAGAACTCCTGCTCGATCGTGACGGCCTCGGTGATGATG 842868
Query 16913 CTAGCAACTCGTTCCTCGGACGGTGTATGTTTAAGATGTTTAAACATCAGACATGCGAAA 16972
|| || | ||| | ||| | | || ||||| |||| || || |||||
Sbjct 842867 CTCTGCACAAGGGCCTGGTTCGGCTTGTTCTTCAGATGCGAGAACAGAAGGCAGGCGAAG 842808
Query 16973 TCGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAACCCGGGCATC 17032
|| || | ||||| || | | ||| || ||||| || ||||| | ||||| |||
Sbjct 842807 TCTGTGTGCATGCCCTCATCACGGGAGATGAGCTCGTTCGAGAATGTGAGCCCGGCCATG 842748
Query 17033 TTTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCAGAAAAGAATATACCCTCG 17092
|| |||||||| | ||| || || || || || || ||||| ||||| ||||||||
Sbjct 842747 AGACCACGTTTCTTCAGCCAGAAGATAGCAGCAAAAGATCCAGAGAAGAAGATACCCTCA 842688
Query 17093 ACGGATGCAAACGCGATTAATCGTTCGGCGTACGTCGCGTCTTTGTTACGAATCCATTTC 17152
|||| ||||| || || | || |||| | |||| || |||| | ||||||| |
Sbjct 842687 ACGGCGGCAAATGCAATGAGACGGAGGGCGAATGTCGAGTTCTTGTCAGAAATCCATCGC 842628
Query 17153 TGCACCCACTCGGCTTTT-TGCTTTATGCAATCCATCGTTTCTATGGCCTTAAATA---A 17208
| |||| || || || ||| ||||| || | || ||||| || || | |
Sbjct 842627 AACGCCCAGTCAGCCTTCCTGCGG-ATGCATGGGATGTTGTCGATGGCATTGAACAGGTA 842569
Query 17209 T-TTCTCTTTTTCCTGTAGGTCGATTATATACGTATCGATGAGTAGGCTGTACATTTCGG 17267
| ||| || || | | ||| | || || ||||||||||| ||| || | ||||
Sbjct 842568 TGTTCGCTGCTT----TGGCTCGCTGATGTATGTATCGATGAGAAGGGAATATGTCTCGG 842513
Query 17268 AGTGTATGTTCTCCATGGCTATCTGAAATCCGTAAAAGCATCGGGCTTCCGCTATTTGAA 17327
|||| ||||||||||| ||||| || ||||| |||||||| || |||| || || |
Sbjct 842512 AGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCATCGTGCCTCCGGGATCTGCA 842453
Query 17328 CTTCCACGTAGAATCGTTCCGCTAGATTTTCGTTCACGATGCCGTCGCTCGCGGCGAAAA 17387
| || | ||| || || | || || ||||| || ||||| ||| |||||||| |
Sbjct 842452 CCTCAGAGCTGAAGCGCTCGACGAGGTTCTCGTTGACAATGCCATCGGATGCGGCGAAGA 842393
Query 17388 ACGC 17391
| ||
Sbjct 842392 ATGC 842389
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 517544674887240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |