Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236685.1_202017-07- 28] 143 sequences; 29,909,557 total letters Query= NC_001875.2 Length=131995 Score E Sequences producing significant alignments: (Bits) Value seq122 116 3e-21 >seq122 Length=1260175 Score = 116 bits (128), Expect = 3e-21 Identities = 153/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 20964 AGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCC 21023 ||||||| |||| |||||||||||| || ||||| || |||| || || || ||||| Sbjct 552110 AGCACCAAGTGCAGAGTGGACTCCTTCTGGATGTTGTAATCCGAAAGTGTCCGGCCGTCC 552169 Query 21024 TCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCG 21083 || ||||| ||||| || | || || | |||||||||| || | ||| |||||||| Sbjct 552170 TCAAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCCGGTGGGATGCCCTCCTTGTCT 552229 Query 21084 GCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTC 21143 ||||||| || || | | ||| || || | ||| ||| | || |||||| Sbjct 552230 TGGATCTTTGACTTGACGTTGTCGATCGTGTCGGATGATTCCACTTCGAGTGTGATGGTC 552289 Query 21144 TTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 |||||||| | || ||||| || |||||||| Sbjct 552290 TTGCCGGTGAGTGTCTTGACGAAAATTTGCAT 552321 Score = 95.1 bits (104), Expect = 1e-14 Identities = 148/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 20964 AGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCC 21023 ||||||| || | ||| || || || || ||||| ||||| | ||| || | | ||| Sbjct 552338 AGCACCAAGTGGAGAGTCGATTCTTTCTGGATGTTGTAGTCGGACAGAGTACGACCATCC 552397 Query 21024 TCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCG 21083 || ||||| ||||| ||| |||| || | ||||||||| || | || |||||||| Sbjct 552398 TCGAGCTGCTTGCCTGCAAAAATCAGGCGCTGCTGGTCAGGTGGGATACCCTCCTTGTCC 552457 Query 21084 GCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTC 21143 |||||| || || | | ||| || || | || ||| || | ||| |||||| Sbjct 552458 TGGATCTTCGACTTGACATTGTCGATGGTGTCGCTGGACTCGACCTCGAGGGTGATGGTC 552517 Query 21144 TTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 |||||||| | || ||||| || || ||||| Sbjct 552518 TTGCCGGTGAGAGTCTTGACGAAGATCTGCAT 552549 Score = 91.5 bits (100), Expect = 1e-13 Identities = 142/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || || || | ||| || | ||| | |||| |||||| |||||||| ||||| | | Sbjct 552551 CCACCACGAAGACGGAGGACGAGATGGAGAGTGCTCTCCTTCTGAATGTTGTAGTCGGAC 552610 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 ||||| | ||||||| ||||| ||||| || |||| | | |||||||| || Sbjct 552611 AGGGTGCGACCGTCCTCGAGCTGCTTGCCTGCGAAAATCAAGCGTTGCTGGTCAGGTGGA 552670 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | ||||||||| || |||||| ||||| | | ||| || || | ||| Sbjct 552671 ATGCCTTCCTTATCCTGGATCTTGCTCTTCACATTGTCGATGGTGTCGGACGACTCAACC 552730 Query 21129 TCCACGGTAATGGTCTTGCCGGT 21151 || | |||||||||||||||||| Sbjct 552731 TCGAGGGTAATGGTCTTGCCGGT 552753 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 422258464081388