Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236685.1_202017-07- 28] 143 sequences; 29,909,557 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq90 113 7e-21 >seq90 Length=1552754 Score = 113 bits (124), Expect = 7e-21 Identities = 87/101 (86%), Gaps = 2/101 (2%) Strand=Plus/Plus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 || |||||||| |||| ||||| | || || |||||||| || ||||||||||||||||| Sbjct 1197702 GCCAAGCGTCACCGCAAGATCT-TGCGCGACAACATCCAGGGTATCACCAAGCCAGCTAT 1197760 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTG 16532 ||| ||||| || ||||||||||| ||||||||| |||||| Sbjct 1197761 CCGACGTCTCGCGCGTCGTGGTGGTGTCAAGCGTATCTCTG 1197801 Score = 95.1 bits (104), Expect = 2e-15 Identities = 120/165 (73%), Gaps = 0/165 (0%) Strand=Plus/Plus Query 16528 CTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTAT 16587 |||| | || |||| ||||||| ||||| ||| | |||| ||||||| || || || Sbjct 1197859 CTCTCCAGTGATCTACGAAGAGACTCGTGGTGTCCTCAAGACCTTCCTCGAGGGTGTCAT 1197918 Query 16588 CCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCTCCATGGATAT 16647 || ||||| || || ||||||||||| || || ||||||||||||||| | || | Sbjct 1197919 CCGCGATGCCGTCACATACACCGAGCACGCCAAGCGCAAGACTGTCACCTCCCTCGACGT 1197978 Query 16648 CGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGG 16692 ||||| || | || || |||||||| | | || ||||| || Sbjct 1197979 TGTCTACGCCCTCAAGCGACAAGGCCGCACCCTCTACGGTTTCGG 1198023 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79075069254099