Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236685.1_202017-07- 28] 143 sequences; 29,909,557 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq50 300 4e-76 seq77 89.7 1e-12 seq11 89.7 1e-12 seq57 87.8 5e-12 >seq50 Length=820670 Score = 300 bits (332), Expect = 4e-76 Identities = 1156/1795 (64%), Gaps = 52/1795 (3%) Strand=Plus/Plus Query 363391 TTCGGATATAAGACGATGGAGAAATCCTACCTATCTC-GTATCAATGGTGATATTGTTGA 363449 ||||| | ||||| ||||| ||| ||||| |||| | || | || | ||| || Sbjct 774062 TTCGGCTTCAAGACTCTGGAGCGATCATACCT-TCTCAGAATTGACGGCAAGGTTGCCGA 774120 Query 363450 ACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGATGTTGATGC 363509 | ||||| || ||| | |||||||| ||| | || || ||| | || |||| || Sbjct 774121 GAGACCGCAACAGATGATCATGCGTGTGGCTGTCGGCATTCATGGGGAAGACATTGAAGC 774180 Query 363510 CGCGATTGAAACATATAAGCTTCTAAGTGCTCGT----GTA-TTCACGCACGCCACGCCA 363564 |||||||| ||||| || ||| || |||| ||| ||||| || || ||||| Sbjct 774181 AGCGATTGAGACATACAA----CTACATG-TCGTTGAAGTACTTCACACATGCTTCGCCA 774235 Query 363565 ACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAAAAATG 363624 ||| | | || |||||| || | | | ||| | | || ||||| | | ||| Sbjct 774236 ACACTTTTCAGTGCTGGTACCCCACAGGCGCAGCTAGCATCCTGCTTCTTGGTGGCCATG 774295 Query 363625 AAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCCAAG 363684 ||||| || ||| || ||||||| || || || |||| ||||| | || |||||| Sbjct 774296 AAGGATGACAGCATTGATGGTATCTACGATACCCTCAAGATATGTGCCATGATCTCCAAG 774355 Query 363685 AATGCAGGCGGAATTGGTGTATCGATCCACAATGTTCGTGC-ACAGAACAGTTACATTCG 363743 || || ||||| |||||| | | ||||| | | || |||| | |||||| | Sbjct 774356 AACGCTGGCGGTATTGGTCTTCATGTTCACAACATCAGGGCCACAGG-CTCATACATTGG 774414 Query 363744 CGGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATACTGC 363803 ||||||| || || || || || || || ||||| || || | | |||| ||||| Sbjct 774415 CGGCACAAACGGCACATCCAACGGTCTTGTACCAATGCTACGAGTCTATAACAACACTGC 774474 Query 363804 GAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCGAGCC 363863 | ||||| ||||||||||| ||||| ||| || ||||| || || || ||||| Sbjct 774475 TCGTTACGTTGACCAGGGTGGCAACAAGCGTCCAGGTGCTTTTGCCATCTACCTTGAGCC 774534 Query 363864 TCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAAAGAGGAATT 363923 ||||| || | | |||| | || || || || ||| ||||| || ||| | Sbjct 774535 GTGGCATGCAGACGTCATGCAGTTCATGGACCTTCGCAAGAACCATGGAAAGGAAGAAGT 774594 Query 363924 GCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGCGTGGA 363983 ||||| || ||| ||||||| || || ||| || | || | |||||| |||| || || Sbjct 774595 TCGTGCGCGCGATTTGTTCTACGCTCTCTGGATTCCCGATCTCTTTATGCAGCGTGTCGA 774654 Query 363984 GGCAGGTAAG-AATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTCCGATGTAT 364042 ||| | | |||| | || | ||||| ||||||| || ||||| || ||||| | Sbjct 774655 -ACAGAACGGCACTTGGACTCTGATGTGCCCCAACGAATGCCCTGGTCTGTCGGATGTTT 774713 Query 364043 GGGGTGACGACTATGTTGCTCTATACGAAAAGTATGAATCGGAGGGAAAGGCTCGTAAGA 364102 |||||||| | | || ||||| ||||| || || |||| ||| ||| Sbjct 774714 ACGGTGACGAGTTCAAGGAGCTGTACGAGCGTTATGAGAGAGAAGGCAAGGGCCGTGAGA 774773 Query 364103 CAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGAACAC 364162 | ||| || ||||| |||||| ||| || | || |||||| ||||| || |||| Sbjct 774774 CGGTTCGTGCTCAGAAAATATGGTATGCTATTCTCGAGGCGCAGACCGAGACCGGCACAC 774833 Query 364163 CCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGGTACAA 364222 | | || ||||||| || | |||||||||| ||| ||| || | ||||| || | Sbjct 774834 CTTTCATTCTGTACAAGGACGCCGCCAACCGCAAGAGCAATCAGAAGAATCTTGGCACCA 774893 Query 364223 TTCAGCAGAGC---AACCTATGTACCGAGATTATTGAATACACCGCTCCCGACGAGACTG 364279 ||| ||||| || | || || ||||| || || ||| | ||||| || ||| | Sbjct 774894 -TCA--AGAGCTCTAATTTGTGCACTGAGATCATGGAGTACTCTGCTCCAGATGAGGTCG 774950 Query 364280 CCGTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTGT--------AAAAGATGGTAC 364331 | || || || || || ||| | || || || | | || | || ||| Sbjct 774951 CTGTCTGCAATCTGGCTTCGCTTGCTCTGCCCACCTACGTCGACATCGAGAACGAGGT-- 775008 Query 364332 TTTTGACCACCAGCATCTTTATGACGTAACCTATCATGCTACTTGCAATCTCGACAAGGT 364391 ||||||| | || | ||| | || || ||| | | || | || || ||||| Sbjct 775009 TTTTGACTTCAAGAAACTTCACGAGGTCACCAAAGTGGTCACACGTAACCTGAACAAGAC 775068 Query 364392 TATCGACAAGAATTATTATCCAATTCCTGAAGC-CGAGCGTTCTAATATGCGTCATCGCC 364450 ||||| | || || || ||| | || || || ||| | | || | || || || | Sbjct 775069 CATCGAGATCAACTACTACCCAGTACCAGAGGCACGAAAGAGC-AACTTCCGCCACCGAC 775127 Query 364451 CGATTGGTCTTGGTGTACAGGGCCTCGCTGACGTTTTTATGATGCTCAAGATGGCATTTG 364510 | |||||||||||||| | || || ||||| | || || ||| ||| |||| | Sbjct 775128 CCATTGGTCTTGGTGTCAACGGTCTTGCTGATGCCTTCTTGGCTCTCCGCATGCCATTCG 775187 Query 364511 ATTCGCCTGACGCTCGTGTTCTAAATAAGGAGATCTTTGAAACAATGTATTTTGCCGCAA 364570 | |||||||| || | || || | |||| ||||| || || ||| ||| || Sbjct 775188 ACTCGCCTGAGGCCAAGGAGCTTAACATCCAGATTTTTGAGACCATCTATCATGCTGCTC 775247 Query 364571 TGACTGCTTCGTGTGATTTGGCAAAAACCAAGGGAAAGTACTCTACTTATGAGGGGTCCC 364630 | ||||| || || | || | | || ||| || || || || | Sbjct 775248 TTGAGGCTTCATGCGAGCTTGCTGAGAAGCTCGGTCCTTACGAGACATACCCAGGCTCTC 775307 Query 364631 CTCTTTCGCAGGGAAAATTCCAGTTTGATCTATGGAATGTCACGCCATCTGTCCGATGGA 364690 | | |||||||| | |||||| || | ||| || || | | || ||| Sbjct 775308 CAGTATCGCAGGGCGAGCTCCAGTACGACATGTGGGGCAAGACTCCTACCGACCTCTGGG 775367 Query 364691 ACTGGGATACGCTACGTTCCAACGTTAAGA------AGCATGGTACTCGCAACTC---CC 364741 |||||| ||| || ||| | |||| |||| ||| |||||||| | Sbjct 775368 ACTGGG--CCGC-AC---TCAAGGGCAAGATCGCCCAGCACGGTGTGCGCAACTCGCTTC 775421 Query 364742 TCGTTACAGCGCCCATGCCCACGGCTTCTACTGCACAGATCCTCGGAAACAACGAGTGCT 364801 ||||| ||||| ||||| || || || || | |||||| | || |||||||||| Sbjct 775422 TCGTT---GCGCCGATGCCAACAGCCTCGACCTCGCAGATCATGGGCTTTAACGAGTGCT 775478 Query 364802 TCGAACCGTTTACAAGCAATCTTTATTCACGCCGGGTTCTTTCCGGAGAATTTCCGGTAG 364861 |||| || | |||||||| |||| || || || || | | || || || | ||| | Sbjct 775479 TCGAGCCATACACAAGCAACATTTACTCTCGTCGTGTGTTGGCTGGCGAGTTCCAGGTCG 775538 Query 364862 TTAATAAGTACCTAGTCAAGGATCTTTCCGACCGCGGGCTGTGGGGTGACAGCATGAAGA 364921 | || | || | |||||||| |||||| || || ||| || | |||||||| Sbjct 775539 TCAACCCATGGCTTCTGAAGGATCTCGTCGACCGTGGCCTCTGGTCAGAGAACATGAAGA 775598 Query 364922 ACTATATCATCGCCGCTAATGGTTCTGTGCAGAACATTCCAGGATTTCCAGAAGATCTGA 364981 || |||||||| | ||||| || | ||| ||| || ||||||| || || | Sbjct 775599 ACCGCATCATCGCTGACAATGGCTCCATTCAGCGCATCCCCAACATTCCAGACGACCTCA 775658 Query 364982 AGCCTATTTACAAAACCGTATGGGAAATTTCCATGCGAACTCTCATTGATATGGCGGCCG 365041 || | | ||||| ||||| ||||| || | ||| | || | | ||||| || | Sbjct 775659 AGGCACTCTACAAGACCGTCTGGGAGATCAGCCAGCGTAACATCGTGCAGATGGCTGCTG 775718 Query 365042 ATCGCGGTGCTTTTATCTGTCAGAGCCAGTCGTTTAACGTATTCATGACTCAGCCAACCT 365101 | || |||||||||||| ||| ||| || ||| | ||||| ||||||| Sbjct 775719 ACCGTGGTGCTTTTATCGACCAGTCTCAGAGCTTGAACATCCACATGAAGGAGCCAACTA 775778 Query 365102 CCGCCAAGCTTACATCCATGCATTTCTACGGGTGGAAATCCGGTCTTAAGACAGG 365156 | |||| |||| |||||| ||| || ||||| |||||| ||||| || Sbjct 775779 TGGGCAAGATTACCAGCATGCACTTCGCTGGTTGGAAGCTCGGTCTCAAGACTGG 775833 >seq77 Length=201515 Score = 89.7 bits (98), Expect = 1e-12 Identities = 191/281 (68%), Gaps = 6/281 (2%) Strand=Plus/Plus Query 111415 AAAATGTAAAAATTTGGGATGGAAATGGATCACGTGACTTTCTAGATTCAGTTGGTCTTG 111474 |||| || | || ||||| || || || || || || | ||||| || || || || | Sbjct 96844 AAAACGTCCACATCTGGGACGGCAACGGTTCGCGAGAGTACCTAGACTCCGTAGGCCTAG 96903 Query 111475 TCGACAACGA--AGAAGGTGATCTCGGACCAGTTTACGGATTTCAATGGCGCCACTTTGG 111532 |||| ||| || ||| || ||||| || || ||||| ||||||||||| |||||||| Sbjct 96904 --GACACCGAGAAGTAGGCGACCTCGGCCCCGTCTACGGGTTTCAATGGCGGCACTTTGG 96961 Query 111533 TGCAGACTACAAAACCATGCACGACTCATATGATTCACAGGGAACTGATCAATTA-CAGA 111591 || || ||||||||| |||||| || || ||| || ||| || | || Sbjct 96962 AGCCGAATACAAAACCTGCCACGACGACTACACCGGCCAAGGAGTCGACCAACTAGCCGA 97021 Query 111592 ATGTCATTGATCAAATTAAGAACAACCCAACTTCTCGTCGCATTATTATGAGTGCATGGA 111651 | || || | || | ||||| ||||| | |||||| || || | ||||| |||| Sbjct 97022 A-GTAATCCACAAACTCAAGAATAACCCTTATGATCGTCGGATAATATTAAGTGCCTGGA 97080 Query 111652 ACCCAAATGCATTGGAAAAAATGGCACTTCCACCATGTCAT 111692 |||| | | | |||||||| || ||||| || ||| Sbjct 97081 ACCCCGCAGACCTTAAGAAAATGGCCCTCCCACCCTGCCAT 97121 >seq11 Length=1109632 Score = 89.7 bits (98), Expect = 1e-12 Identities = 146/207 (71%), Gaps = 5/207 (2%) Strand=Plus/Plus Query 22441 AAGGCAGATTGGGCGCTGAAATGGATGA---ACAATGAACGTT-CATTCGCGGAACGTCT 22496 ||||| || |||||| || |||||| |||| |||| ||||||| ||||| Sbjct 842611 AAGGCTGACTGGGCGTTGCGATGGATTTCTGACAA-GAACTCGACATTCGCCCTCCGTCT 842669 Query 22497 TATTGCATTTGCTGTGGTTGAAGGCATTTTCTTTTCTGGAGCATTTTGTGCAATCTTTTG 22556 ||||||||||| | ||||| || || ||||| |||||| | ||| ||| ||||| || Sbjct 842670 CATTGCATTTGCCGCCGTTGAGGGTATCTTCTTCTCTGGATCTTTTGCTGCTATCTTCTG 842729 Query 22557 GCTaaaaaaaCGTGCAATTATGCCGGGTCTAACGTTTTCAAATGAGTTAATTAGCCGAGA 22616 ||| || ||||||| | ||| | || || || || || || ||| | || ||| || Sbjct 842730 GCTGAAGAAACGTGGTCTCATGGCCGGGCTCACATTCTCGAACGAGCTCATCTCCCGTGA 842789 Query 22617 TGAGGGTCTTCATACCGATTTTGCGTG 22643 |||||| | || || || || || || Sbjct 842790 TGAGGGCATGCACACAGACTTCGCCTG 842816 >seq57 Length=2428954 Score = 87.8 bits (96), Expect = 5e-12 Identities = 104/141 (74%), Gaps = 0/141 (0%) Strand=Plus/Plus Query 65871 GTTACGAATCGTTCCGTCATAATTGCACATATTATCTTCACTTGCCTTTACAAGACAACG 65930 |||||| | || | ||| || ||| ||| ||||| ||||| || |||| ||| Sbjct 1202188 GTTACGCACAGTGCTGTCGTACTTGATCATGACTTCTTCCAAAGCCTTCACTAGACGACG 1202247 Query 65931 CTGGATGTAACCACTGTTTGCAGTTTTTACCGCGGTATCAACGAGACCTTCACGCCCGGA 65990 ||||||||||||| | | |||||| || || |||||||||| |||||||||||| || Sbjct 1202248 CTGGATGTAACCAGTCTCTGCAGTCTTGACAGCGGTATCAATGAGACCTTCACGACCACC 1202307 Query 65991 CATTGCAGAAAAGAAAAACTC 66011 ||| || ||||| ||||| Sbjct 1202308 CATGGCGTGGAAGAAGAACTC 1202328 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303351212011826