Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236685.1_202017-07- 28] 143 sequences; 29,909,557 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq50 185 1e-41 >seq50 Length=820670 Score = 185 bits (204), Expect = 1e-41 Identities = 637/981 (65%), Gaps = 32/981 (3%) Strand=Plus/Minus Query 62747 GCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCA 62806 |||| || |||||||| || || || ||||||| | | | | || | || |||||| Sbjct 774975 GCAAGCGAAGCCAGATTGCAGACAGCGACCTCATCTGGAGCAGAGTACTCCATGATCTCA 774916 Query 62807 GTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACAC 62866 ||||| | |||| | ||||||||| || | ||| | ||||| ||||| ||| Sbjct 774915 GTGCACAAATTAGAGCTCTTGATGGTGCCAAGATTCTTCTGATTGCTCTTGCGGTTGGCG 774856 Query 62867 GCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTC 62926 || ||||| || |||||||| || || || || || |||| | || | ||| || | | Sbjct 774855 GCGTCCTTGTACAGAATGAAAGGTGTGCCGGTCTCGGTCTGCGCCTCGAGAATAGCATAC 774796 Query 62927 CAGAC-----GA-CTCGAGCCTTTATTATAGATTTGTATCTCTT---TTCTCTTTCGTAT 62977 || | || | ||| || | | | | | ||| |||||| || || Sbjct 774795 CATATTTTCTGAGCACGAACCGTC-TCACGG--------CCCTTGCCTTCTCTCTCATAA 774745 Query 62978 AGTGTATACAA-TCGTTCGAACTCGTCTCCCCAAACATTGTCCAGTCCAGGACATTCATC 63036 | |||| || || ||||||||| || |||||| ||| ||||| ||||| | Sbjct 774744 CGCTCGTACAGCTCCTT-GAACTCGTCACCGTAAACATCCGACAGACCAGGGCATTCGTT 774686 Query 63037 CGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAAT 63096 || ||||||| | ||| |||| | | || || | |||||||||||| ||||| Sbjct 774685 GGGGCACATCAGAGTCCAAGTGCCGTTCTGTTCGACACGCTGCATAAAGAGATCGGGAAT 774626 Query 63097 CCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAG 63156 ||| ||||| || | ||| | | | | ||| || ||||| ||||| ||| Sbjct 774625 CCAGAGAGCGTAGAACAAATCGCGCGCACGAACTTCTTCCTTTCCATGGTTCTTGCGAAG 774566 Query 63157 ATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGG 63216 || | |||| ||| | || | ||||||||| || | ||| ||||| | | | || || Sbjct 774565 GTCCATGAACTGCATGACGTCTGCATGCCACGGCTCAAGGTAGATGGCAAAAGCACCTGG 774506 Query 63217 CCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGG 63276 || ||||| || ||||| || | ||| | ||| ||||| ||||| |||| | |||||| Sbjct 774505 ACGCTTGTTGCCACCCTGGTCAACGTAACGAGCAGTGTTGTTATAGACTCGTAGCATTGG 774446 Query 63277 AATAATACCATTGGATGTACCATTGGTCCCTGAGATATAGCTTCCACTGGCACGAATATT 63336 | || ||| |||||||| || || || || || || || |||| | || || Sbjct 774445 TACAAGACCGTTGGATGTGCCGTTTGTGCCGCCAATGTATGAGCCTGTGGCCCTGATGTT 774386 Query 63337 ACTAA-TTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACG 63395 || ||| ||||| || || || || | || ||||| | || ||| || | | Sbjct 774385 GTGAACATGA-AGACCAATACCGCCAGCGTTCTTGGAGATCATGGCACATATCTTGAGGG 774327 Query 63396 TATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTT 63455 |||| ||||| || || || || |||||| ||||| | | || ||| || | Sbjct 774326 TATCGTAGATACCATCAATGCTGTCATCCTTCATGGCCACCAAGAAGCAG---GATGCTA 774270 Query 63456 GGTGACGACT----AGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGAGTAAACCATTTT 63511 | || || || || || ||| | || | || || ||||| || || || | || Sbjct 774269 GCTG-CGCCTGTGGGGTACCAGCACTGAAAAGTGTTGGCGAAGCATGTGTGAAGTACTTC 774211 Query 63512 TCAGA-AAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTAC 63570 || | |||| ||||| |||||||| |||| || || || |||||| || || Sbjct 774210 AACGACATGTAG-TTGTATGTCTCAATCGCTGCTTCAATGTCTTCCCCATGAATGCCGAC 774152 Query 63571 TGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAA 63630 || |||||||| | ||| || || ||||| || | | |||| || ||| | | | Sbjct 774151 AGCCACACGCATGATCATCTGTTGCGGTCTCTCGGCAACCTTGCCGTCAATTCTGAGAAG 774092 Query 63631 GTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAAT 63690 ||| ||| |||| ||| || || || || || | ||| ||||| || || || | Sbjct 774091 GTATGATCGCTCCAGAGTCTTGAAGCCGAAGTACTGGTAGTTGAAGTCGCGGTCATAGAC 774032 Query 63691 AATAACCGAGTTGAGTTTATC 63711 ||| ||||||| || | ||| Sbjct 774031 AATGGCCGAGTTCAGCTCATC 774011 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633630867382800