Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236685.1_202017-07-
28] 143 sequences; 29,909,557 total letters
Query= NC_009127.1
Length=295146
Score E
Sequences producing significant alignments: (Bits) Value
seq11 291 2e-73
seq50 194 3e-44
seq55 87.8 3e-12
>seq11
Length=1109632
Score = 291 bits (322), Expect = 2e-73
Identities = 583/854 (68%), Gaps = 34/854 (4%)
Strand=Plus/Plus
Query 42309 ATGTACAAGAAGGCGCAGTTCTCCAACTGGACCGCCGAGGAGATTGACCTGGCCAAGGA- 42367
|||||||| ||||| || ||| |||||| || ||||||||||| ||| | |||||
Sbjct 842269 ATGTACAAAAAGGCCGAGGCCTCATTCTGGACAGCTGAGGAGATTGATCTGTCGAAGGAT 842328
Query 42368 ---CACGGCCGGCT---GGGAGTCACTGTCTGAGAACGAAAAGTTTTTCCTCAAAAACAT 42421
|||| | || | || ||| | | |||||| || ||| || | || |
Sbjct 842329 CTCCACGACTGGAACAAGCGACTCAACGACGACGAACGA----TTCTTCATCTCACACGT 842384
Query 42422 ACTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCAGGTTCAT 42481
|| || ||||||||||| || || ||||| ||||| |||||||| | | | ||||
Sbjct 842385 CCTCGCATTCTTCGCCGCATCCGATGGCATTGTCAACGAGAACCTCGTCGAGCGCTTCAG 842444
Query 42482 GAAAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCATAGAGAA 42541
||||||||| | ||||| || |||||||||||||||||||| || |||||
Sbjct 842445 CTCTGAGGTGCAGATCCCGGAGGCACGATGCTTCTACGGCTTCCAGATCATGATGGAGAA 842504
Query 42542 CGTGCACTCTGAGGTGTACGCCAAACTGCTCAACACGTACATCCTGGATCCCGTCGAGCG 42601
| | ||||| ||| || || || || | || |||||| || || ||||
Sbjct 842505 CATCCACTCCGAGACATATTCCCTTCTCATCGATACATACATCAGCGAGCCAAAGCAGCG 842564
Query 42602 TAACGGGCTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGGCGGACTGGGC 42661
| |||||||| ||||| || | || || |||||| | |||||| ||||||||
Sbjct 842565 AACATACCTGTTCAATGCCATCGACAACATCCCATGCATCCGCAGGAAGGCTGACTGGGC 842624
Query 42662 GCTCAACTGGATCGAGAGTCCCGA-CGCAACGTTCGGCGAGAGGCTGGTAGCCTTTACCG 42720
| | ||||| | | || | | || |||| | | || | || ||| |||
Sbjct 842625 GTTGCGATGGATTTCT-GACAAGAACTCGACATTCGCCCTCCGTCTCATTGCATTTGCCG 842683
Query 42721 CCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAAGCAGAA-G 42779
|||| ||||| ||||||||||| || | || || | ||||||||||| ||| | |
Sbjct 842684 CCGTTGAGGGTATCTTCTTCTCTGGATCTTTTGCTGCTATCTTCTGGCTGAAGAAACGTG 842743
Query 42780 GTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAGGGGCTGCAT 42839
|| || ||| |||| ||||| ||||||||||| |||||| | | || ||||| ||||
Sbjct 842744 GTCTC-ATGGCCGGGCTCACATTCTCGAACGAGCTCATCTCCCGTGATGAGGGCATGCAC 842802
Query 42840 AGGGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTCAGGCACAAGCCCTCGAAGGAGCGG 42899
| ||||| |||||||| ||||||||| || || | | ||||||| ||| |
Sbjct 842803 ACAGACTTCGCCTGCCTTCTGTTCTCG---CATCTGAAGAACAAGCCGAACCAGGCCCTT 842859
Query 42900 GTCCGGGCCATCATCACGGAGGCCGTGGAGATCGAGAAGGAGTTCCTCACGCAGTCGCTG 42959
|| | | ||||||||| |||||||| ||||||| |||||||| | || || ||||
Sbjct 842860 GTGCAGAGCATCATCACCGAGGCCGTCACGATCGAGCAGGAGTTCTTGAC--AGACGCTC 842917
Query 42960 C-CCGTGTCC-CTGGTCGGCATGAACCACGACCTCATGTGCAAGTACATCCAGTACGTCG 43017
|| || || | || |||||| | |||||||| | ||||| | | |||||
Sbjct 842918 TTCCATGCAAGCTTCTGGGGATGAACGCTGGCCTCATGTCACAATACATTGAATTCGTCG 842977
Query 43018 CCGACCATCTCCTGTGCCAGATGGGTCTCAGCCGCC------TCTACAACACGCCGTGCC 43071
|||| | || |||| ||| ||| || | |||||||| | | ||
Sbjct 842978 CCGATCGCCTACTGT------TGGCACTCGGCAACAAGAAGTTCTACAACGCCACCAACC 843031
Query 43072 CCTTCGACTTTATGGAGAACATCTCGTTGGAGGGCAAGACCAACTTTTTCGAGAAGCGCG 43131
|||||||||| ||||||||||| ||| ||| |||||||||||||| ||||||||||| |
Sbjct 843032 CCTTCGACTTCATGGAGAACATTTCGCTGGGCGGCAAGACCAACTTCTTCGAGAAGCGTG 843091
Query 43132 TCGCCGACTACCAG 43145
| | ||| ||||||
Sbjct 843092 TTGGCGAGTACCAG 843105
>seq50
Length=820670
Score = 194 bits (214), Expect = 3e-44
Identities = 480/722 (66%), Gaps = 21/722 (3%)
Strand=Plus/Minus
Query 244688 GCCAGGTTGCAGACGGCCACCTCCTCCGAGTTGGTGTACTGGACAATCTCGGTGCAGAGG 244747
||||| |||||||| || ||||| || | | ||||| | ||||| ||||| |
Sbjct 774966 GCCAGATTGCAGACAGCGACCTCATCTGGAGCAGAGTACTCCATGATCTCAGTGCACAAA 774907
Query 244748 TTACTGCACTTGATGGTGCCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGCGTCCTTG 244807
||| || |||||||||||| || | || |||||| |||| |||| ||||||||||
Sbjct 774906 TTAGAGCTCTTGATGGTGCCAAGATTCTTCTGATTGCTCTTGCGGTTGGCGGCGTCCTTG 774847
Query 244808 TAGAGCATGAAGGGCCCCCCGGTCTCGAGCTGGGCGACGAGGACGCTGTTCCAGAGGTCC 244867
|| || ||||| || ||||||||| ||| || |||| | | ||| | | |
Sbjct 774846 TACAGAATGAAAGGTGTGCCGGTCTCGGTCTGCGCCTCGAGAATAGCATACCATATTTTC 774787
Query 244868 CTAGCCTTGACCGTCCTGCGAGCCTTGCCCTCTGCCTCGTAGCGGGTGTACAGGGCCTCG 244927
||| |||||| || ||||||| ||| ||| || || |||||| ||| |
Sbjct 774786 TGAGCACGAACCGTCTCACGGCCCTTGCCTTCTCTCTCATAACGCTCGTACAGCTCCTTG 774727
Query 244928 AACTCGGGGCCCCAGACCTCGTCTAGGCCGGGGCA--CGACGCCGGGCACATGAGACTCC 244985
|||||| || | || || || || ||||| || | |||||||| ||| |||
Sbjct 774726 AACTCGTCACCGTAAACATCCGACAGACCAGGGCATTCGTTG--GGGCACATCAGAGTCC 774669
Query 244986 ACTCGCCGCCGTCCTTGACCCTCTGCATGAAGAGGTCGGGGATCCAGAGGGCCTGGAAGA 245045
| |||| | | ||| | |||||| ||||| ||||| |||||||| || | ||| |
Sbjct 774668 AAGTGCCGTTCTGTTCGACACGCTGCATAAAGAGATCGGGAATCCAGAGAGCGTAGAACA 774609
Query 245046 GGTCCCTGGTCCTCTGCTCGTCCGAGCCAGTGTTCTTCCTCAGCTCCAAAAAGTCAAAGA 245105
|| | | | || ||| ||| |||||| | || |||| || | | ||
Sbjct 774608 AATCGCGCGCACGAACTTCTTCCTTTCCATGGTTCTTGCGAAGGTCCATGAACTGCATGA 774549
Query 245106 CGTCGACGTGCCAGGGCTCCATGTAGACAGCGAGGGCGCCGGGCCGCTTGTTGCCTCCCT 245165
|||| | ||||| ||||| | ||||| || | || || || ||||||||||| ||||
Sbjct 774548 CGTCTGCATGCCACGGCTCAAGGTAGATGGCAAAAGCACCTGGACGCTTGTTGCCACCCT 774489
Query 245166 GGTCCACCATCCTCTCGAGC-GCGTTG---AAGATGCGCAGGGTAGGCACTATGCCGTTA 245221
||| || | | ||||| | |||| ||| || || | || || | |||||
Sbjct 774488 GGT----CAACGTAACGAGCAGTGTTGTTATAGACTCGTAGCATTGGTACAAGACCGTTG 774433
Query 245222 GAGTGGCCGTTGGTGCCCTTGATGTAGGCGCCCTTGCCCCTGAGGTTGCTGATGGACATG 245281
|| |||||| ||||| ||||| | ||| || |||||| |||| || |||||
Sbjct 774432 GATGTGCCGTTTGTGCCGCCAATGTATGAGCCTGTGGCCCTGATGTTG----TGAACATG 774377
Query 245282 ----CCTAGTCCGCCGGCGTGCTTGGAGATGAGGGCGCAGCTCTTGATGGTGTCTGCTAT 245337
|| | ||||| |||| ||||||||| | ||| || |||||| ||| || ||
Sbjct 774376 AAGACCAATACCGCCAGCGTTCTTGGAGATCATGGCACATATCTTGAGGGTATCGTAGAT 774317
Query 245338 GCCCTCCATGCTGTCCGACTTCATGTTGAGCAGAAAGCAGGAGGACAGCTGGGGCT-TGG 245396
|| || |||||||| ||||||| | || |||||||| | ||||| | || |||
Sbjct 774316 ACCATCAATGCTGTCATCCTTCATGGCCACCAAGAAGCAGGATGCTAGCTGCGCCTGTGG 774257
Query 245397 GG 245398
||
Sbjct 774256 GG 774255
>seq55
Length=612710
Score = 87.8 bits (96), Expect = 3e-12
Identities = 100/131 (76%), Gaps = 4/131 (3%)
Strand=Plus/Plus
Query 242937 GAGCTGATGAGGTTCCCGGACAGGACCACTCCGATCGGACAGATGATCAACTCGTACCTG 242996
|||| ||||| |||||||||||||| || ||||||||||||||||||| || ||
Sbjct 552959 GAGCATATGAGATTCCCGGACAGGACGACAGTGATCGGACAGATGATCAACAGCTATCT- 553017
Query 242997 CTCAACAAG-AGCG-ATCTGGACGATCACGTCGTACACCTCCTGTTCTCGGCCAACCGAT 243054
||| || | || | | || ||||||| | |||| || || |||||||| || ||||
Sbjct 553018 -CCAAGGAGCATCGCAACAAGAAGATCACGCCATACATCTGCTTTTCTCGGCGAATCGAT 553076
Query 243055 GGGAAGCCGCC 243065
||||||| |||
Sbjct 553077 GGGAAGCTGCC 553087
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 944337511993680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |