Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236685.1_202017-07-
28] 143 sequences; 29,909,557 total letters
Query= NC_009898.1
Length=368683
Score E
Sequences producing significant alignments: (Bits) Value
seq122 140 8e-28
seq101 129 1e-24
seq11 93.3 1e-13
>seq122
Length=1260175
Score = 140 bits (154), Expect = 8e-28
Identities = 167/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
||||| ||||| | ||| || | || | || |||||| ||||| || |||||||
Sbjct 552323 CCACCACGGAGACGAAGCACCAAGTGGAGAGTCGATTCTTTCTGGATGTTGTAGTCGGAC 552382
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
|| || || || || || | || || ||||| || ||||| ||||| || | ||||
Sbjct 552383 AGAGTACGACCATCCTCGAGCTGCTTGCCTGCAAAAATCAGGCGCTGCTGGTCAGGTGGG 552442
Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426
|| || || || |||||||| |||| || || || || || | ||||| || || ||
Sbjct 552443 ATACCCTCCTTGTCCTGGATCTTCGACTTGACATTGTCGATGGTGTCGCTGGACTCGACC 552502
Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
||||| ||||| ||||| ||||| |||||||||||||| ||||||||
Sbjct 552503 TCGAGGGTGATGGTCTTGCCGGTGAGAGTCTTGACGAAGATCTGCAT 552549
Score = 111 bits (122), Expect = 4e-19
Identities = 139/191 (73%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342
|| || ||||| || || || | || || || ||||| || | || || || ||||||
Sbjct 552131 TCCTTCTGGATGTTGTAATCCGAAAGTGTCCGGCCGTCCTCAAGCTGCTTGCCGGCGAAG 552190
Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402
|| |||||||| || |||||| || || || || ||||| || | || |||||
Sbjct 552191 ATGAGACGCTGCTGGTCCGGTGGGATGCCCTCCTTGTCTTGGATCTTTGACTTGACGTTG 552250
Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462
|| || | ||| ||||| |||||||| ||||| ||||| ||||| || |||||||||
Sbjct 552251 TCGATCGTGTCGGATGATTCCACTTCGAGTGTGATGGTCTTGCCGGTGAGTGTCTTGACG 552310
Query 288463 AATATCTGCAT 288473
|| || |||||
Sbjct 552311 AAAATTTGCAT 552321
Score = 109 bits (120), Expect = 1e-18
Identities = 148/204 (73%), Gaps = 2/204 (1%)
Strand=Plus/Plus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
||||| || || | || |||||||| | ||||| || || || || || |||||||
Sbjct 552551 CCACCACGAAGACGGAGGACGAGATGGAGAGTGCTCTCCTTCTGAATGTTGTAGTCGGAC 552610
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
|| ||||| ||||| || | || || |||||||| |||| || || || | |||
Sbjct 552611 AGGGTGCGACCGTCCTCGAGCTGCTTGCCTGCGAAAATCAAGCGTTGCTGGTCAGGTGGA 552670
Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCT-TTCACGTTTTCTATAGAATCGCTCGATTCTAC 288425
|| ||||| ||||||||||| || ||| ||||| || || || | ||| ||| || ||
Sbjct 552671 ATGCCTTCCTTATCCTGGATCTT-GCTCTTCACATTGTCGATGGTGTCGGACGACTCAAC 552729
Query 288426 TTCGAGCGTGATCGTCTTCCCGGT 288449
||||| || || ||||| |||||
Sbjct 552730 CTCGAGGGTAATGGTCTTGCCGGT 552753
>seq101
Length=1488530
Score = 129 bits (142), Expect = 1e-24
Identities = 138/180 (77%), Gaps = 2/180 (1%)
Strand=Plus/Plus
Query 288286 TTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATC 288345
|| ||||| || ||||||| ||| ||||| || || || || || ||||| |||||||||
Sbjct 391872 TTCTGGATGTTGTAGTCGGAGAGGGTGCGACCATCCTCCAACTGCTTTCCAGCGAAGATC 391931
Query 288346 AGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCT-TTCACGTTTTC 288404
| |||||| || ||||||||| || || |||||||| || ||| || || || ||
Sbjct 391932 AAACGCTGCTGGTCCGGTGGGATTCCCTCCTTGTCCTGGATCTT-GCTCTTGACATTGTC 391990
Query 288405 TATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAA 288464
|| | |||||||| || || ||||||||||| ||||| || || || ||||| |||||
Sbjct 391991 GATGGTGTCGCTCGACTCGACCTCGAGCGTGATGGTCTTGCCAGTGAGGGTCTTTACGAA 392050
>seq11
Length=1109632
Score = 93.3 bits (102), Expect = 1e-13
Identities = 132/186 (71%), Gaps = 0/186 (0%)
Strand=Plus/Plus
Query 269155 GGTATGAATGCCGATCTCATGAATCAATATATCGAATTCGTGGCTGATCGTATCTTCACG 269214
|| ||||| || | |||||| ||||| || |||||||| || ||||| | | |
Sbjct 842935 GGGATGAACGCTGGCCTCATGTCACAATACATTGAATTCGTCGCCGATCGCCTACTGTTG 842994
Query 269215 GCACTCGGTTATGAGAAAGTGTACAATTCGAAGAATCCCTTCGCCTTTATGGAACTAATT 269274
|||||||| | |||| | ||||| | | || ||||||| ||| ||||| |||
Sbjct 842995 GCACTCGGCAACAAGAAGTTCTACAACGCCACCAACCCCTTCGACTTCATGGAGAACATT 843054
Query 269275 TCGCTCGAAGGAAAGACGAACTTCTTCGAAAAGCGTGTCAGCGACTATCAACGTCCTGGT 269334
||||| | || ||||| ||||||||||| |||||||| |||| || || |||||
Sbjct 843055 TCGCTGGGCGGCAAGACCAACTTCTTCGAGAAGCGTGTTGGCGAGTACCAGAAGGCTGGT 843114
Query 269335 GTAATG 269340
|| |||
Sbjct 843115 GTCATG 843120
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1179652238651954
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |