Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236685.1_202017-07- 28] 143 sequences; 29,909,557 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq11 132 6e-26 >seq11 Length=1109632 Score = 132 bits (146), Expect = 6e-26 Identities = 347/521 (67%), Gaps = 9/521 (2%) Strand=Plus/Minus Query 127520 GCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCT 127579 || || ||| ||| | ||||| |||||||||||||| || |||||||| || || Sbjct 842813 GCGAAGTCTGTGTGCATGCCCTCATCACGGGAGATGAGCTCGTTCGAGAATGTGAGCCCG 842754 Query 127580 GGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATC 127639 | ||||||||| || ||||||| |||||| || ||| ||| || |||||||||||||| Sbjct 842753 GCCATGAGACCACGTTTCTTCAGCCAGAAGATAGCAGCAAAAGATCCAGAGAAGAAGATA 842694 Query 127640 CCCTCCACACACGCGAACGCAAATAGACGCTCGGCAAAGGAGCGGGACTTTGT-ATCAAA 127698 ||||| || || || |||| ||||| ||| || | || | |||| | || Sbjct 842693 CCCTCAACGGCGGCAAATGCAATGAGACGGAGGGCGAATG-TCGAGTTCTTGTCAGAAAT 842635 Query 127699 CCACTTCATCGCCCACTGTGCCTTTTTCTCGATACATGGGACGGTCTGGATCGC-TTCAA 127757 ||| || |||||| | ||||| | ||| ||||||| | | | ||| || || || Sbjct 842634 CCATCGCAACGCCCAGTCAGCCTTCCTGCGGATGCATGGGATGTTGTCGATGGCATTGAA 842575 Query 127758 AGAGTTCCTTCTTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTTT 127817 || ||| | || ||| || ||||||| |||| ||||| |||||||| | Sbjct 842574 CAGGTATGTTCGCTGCT-TTGGCTCGCTGATGTATGTATCGATGAGAAGGGAATATGTCT 842516 Query 127818 CGCCGTGGACCAT-TTCATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTTATC 127876 || ||||| | | ||| || | ||| | ||||||| | || || || ||| Sbjct 842515 CGGAGTGGATGTTCTCCATCAT-GATCTGGAAGCCGTAGAAGCATCGTGCCTCCGGGATC 842457 Query 127877 TGTACCTCATCGGCAAAATTGTTATTGATATTCTCAAAAACAATTCCATCGGACCCAGCA 127936 || |||||| | || | || ||||| ||||| |||||||| | || Sbjct 842456 TGCACCTCAGAGCTGAAGCGCTCGACGAGGTTCTCGTTGACAATGCCATCGGATGCGGCG 842397 Query 127937 AAAAACGCCAGGATATACTTTATGAATTTCTGTTCATTCTCGTTCA---GGGTCTTCCAG 127993 || || || |||| | ||||| |||| | ||||| | | | |||||| Sbjct 842396 AAGAATGCGAGGACGTGTGAGATGAAGAATCGTTCGTCGTCGTTGAGTCGCTTGTTCCAG 842337 Query 127994 TCGTCGAGATCCTTTGAGAGATCTACCTCCTCCGCAGTCCA 128034 |||| ||||||||| || ||||| | |||||| || ||||| Sbjct 842336 TCGTGGAGATCCTTCGACAGATCAATCTCCTCAGCTGTCCA 842296 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613506103355880