Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236685.1_202017-07-
28] 143 sequences; 29,909,557 total letters
Query= NC_014766.1
Length=194022
Score E
Sequences producing significant alignments: (Bits) Value
seq50 264 1e-65
seq57 111 2e-19
seq11 111 2e-19
>seq50
Length=820670
Score = 264 bits (292), Expect = 1e-65
Identities = 904/1386 (65%), Gaps = 35/1386 (3%)
Strand=Plus/Plus
Query 111621 ATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGATTCTGTTTTGGAGACA 111680
||| ||||||| || || |||| || ||||||||||| ||||| | | | ||||||
Sbjct 774134 ATGATCATGCGTGTGGCTGTCGGCATTCATGGGGAAGACATTGAAGCAGCGATTGAGACA 774193
Query 111681 TACGACAAGATGTCCC-GTGGTATGTTCATCCACGCAACACCAACCCTCTTCAACGCTGG 111739
||| || | ||||| | ||| |||| || || | ||||| || |||| |||||
Sbjct 774194 TACAACTACATGTCGTTGAAGTAC-TTCACACATGCTTCGCCAACACTTTTCAGTGCTGG 774252
Query 111740 TACACCA-AGACCC--CAAATGTCCAGTTGTTTCCTTATTGCAAACAAGGAGGATTCAAT 111796
||| ||| || | | | | ||| || ||| | | || | ||||| || ||
Sbjct 774253 TACCCCACAGGCGCAGCTAGCATCC---TGCTTCTTGGTGGCCATGAAGGATGACAGCAT 774309
Query 111797 CAATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTGGGCTGGTGGTAT 111856
|||| || |||| || |||| ||||||| ||||| ||| ||||| |||||
Sbjct 774310 TGATGGTATCTACGATACCCTCAAGATATGTGCCATGATCTCCAAGAACGCTGGCGGTAT 774369
Query 111857 CGGGATGCACATCCATGATGTCAGAGCCAACAAGTCTCGTA--TTAGAGGTACAAATGGT 111914
|| | || | || | |||| |||| || ||| || || | || ||||| ||
Sbjct 774370 TGGTCTTCATGTTCACAACATCAGGGCCAC--AGGCTCATACATTGGCGGCACAAACGGC 774427
Query 111915 CAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGTAAAC 111974
||| | ||| || | |||||||| || || | |||| ||| || || || || ||
Sbjct 774428 ACATCCAACGGTCTTGTACCAATGCTACGAGTCTATAACAACACTGCTCGTTACGTTGAC 774487
Query 111975 CAAGCTGG------GCGTCGCAAGGGATCTATCGCAGTCTATCTTGAGCCATGGCACGCG 112028
|| | ||| ||||| || | | || | || |||| |||||||| ||||| ||
Sbjct 774488 CAGGGTGGCAACAAGCGTC-CAGGTG--CTTTTGCCATCTACCTTGAGCCGTGGCATGCA 774544
Query 112029 GATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGGCGCGGTGC-CG 112087
|| ||||| ||||| | || | || ||||| || | || || | || ||| ||
Sbjct 774545 GACGTCATGCAGTTCATGGACCTTCGCAAGAACCATGGAAAGGAAGAAGTTCG-TGCGCG 774603
Query 112088 CGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAGTGG 112147
|||| | |||| ||||||||||||||| |||||||| ||| || | || || ||| ||
Sbjct 774604 CGATTTGTTCTACGCTCTCTGGATTCCCGATCTCTTTATGCAGCGTGTCGAACAGAACGG 774663
Query 112148 CAATTGGTCTCTCTTTTGTCCAGAC-AAGGCACCCGGTCTCTCCGATGCCGTGGGTGAGG 112206
|| |||| |||| | || || || || || || ||||| || |||| ||||| |
Sbjct 774664 CACTTGGACTCTGATGTGCCCCAACGAATGC-CCTGGTCTGTCGGATGTTTACGGTGACG 774722
Query 112207 AGTTTGAAGCCCTCTACACAAAGTACGAGGAAGAAAGTCGGGCGACTGCGACGGTGCCAG 112266
|||| | | || ||| || ||| |||| | || || |||||| | |
Sbjct 774723 AGTTCAAGGAGCTGTACGAGCGTTATGAGAGAGAAGGCAAGGGCCGTGAGACGGTTCGTG 774782
Query 112267 CTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATATATGC 112326
|| | | ||| | ||||||||| || | || |||||||| || ||||| | || |
Sbjct 774783 CTCAGAAAATATGGTATGCTATTCTCGAGGCGCAGACCGAGACCGGCACACCTTTCATTC 774842
Query 112327 TTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAGAGTT 112386
| ||||| |||||| |||| ||||| ||||| |||||| | || |||||||| |
Sbjct 774843 TGTACAAGGACGCCGCCAACCGCAAGAGCAATCAGAAGAATCTTGGCACCATCAAGAGCT 774902
Query 112387 CCAACCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTGTAACC 112446
| || | || || || ||| |||| | | | ||||||| ||||| || || |
Sbjct 774903 CTAATTTGTGCACTGAGATCATGGAGTACTCTGCTCCAGATGAGGTCGCTGTCTGCAATC 774962
Query 112447 TCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGACATTTGATTATGAAA 112506
| || || | ||||| |||| || || || |||| || ||||| | | |
Sbjct 774963 TGGCTTCGCTTGCTCTGCCCACCTACGTCGACATCGAGAACGAGGTTTTTGACTTCAAGA 775022
Query 112507 AACTCCACGAAGTTACGAAAACTGTCACAAAAAACCTAAACAGAGTTATTGATAGAAATT 112566
|||| ||||| || || ||| |||||| ||||| |||| || || | || |
Sbjct 775023 AACTTCACGAGGTCACCAAAGTGGTCACACGTAACCTGAACAAGACCATCGAGATCAACT 775082
Query 112567 TTTACCCCGT-TGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATTGGTCTCGGT 112625
||||| || ||| || || || || | | ||||| || |||||||| |||
Sbjct 775083 ACTACCCAGTACCAGA-GGCACGAAAGAGCAACTTCCGCCACCGACCCATTGGTCTTGGT 775141
Query 112626 GTCCAAGGTCTCGCGGATGTATTCATTCTTTGTCGCCACG-CATTTGATTCCGACGAAGC 112684
||| | ||||| || |||| ||| || | || || | |||| || || || ||
Sbjct 775142 GTCAACGGTCTTGCTGATGCCTTC-TTGGCTCTCCGCATGCCATTCGACTCGCCTGAGGC 775200
Query 112685 GAAGGAAATCAATGCGCGTATATTTGAGACAATGTATCACGCCGCTCTTGAGGCGAGTTC 112744
||||| | || | || |||||||| || ||||| || ||||||||||| |
Sbjct 775201 CAAGGAGCTTAACATCCAGATTTTTGAGACCATCTATCATGCTGCTCTTGAGGCTTCATG 775260
Query 112745 GGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAGCTTCACAAGG 112804
||| | || ||| ||||| || || || | || ||||||| || || ||
Sbjct 775261 CGAGCTTGCTGAGAAGCTCGGTCCTTACGAGACATACCCAGGCTCTCCAGTATCGCAGGG 775320
Query 112805 GGTGCTTCAATTTGATATGTGGG--AAG-GTGAGACCAAGCTTCACTACGACTGGGACGC 112861
| ||| || | || ||||||| ||| | ||| | || || ||||||| |||
Sbjct 775321 CGAGCTCCAGTACGACATGTGGGGCAAGACTCCTACCGACCT---CTGGGACTGGGCCGC 775377
Query 112862 TCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGATGGCACCAATGCC 112921
||||||| ||| || | ||| | || ||| ||| | | || || |||||
Sbjct 775378 ACTCAAGGGCAAGATCGCCCAGCACGGTGTGCGCAACTCGCTTCTCGTTGCGCCGATGCC 775437
Query 112922 AACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCCTACACGACGAA 112981
||||||||| ||| | || ||| |||| ||| || ||||| || || ||||| | ||
Sbjct 775438 AACAGCCTCGACCTCGCAGATCATGGGCTTTAACGAGTGCTTCGAGCCATACACAAGCAA 775497
Query 112982 CATCTA 112987
||| ||
Sbjct 775498 CATTTA 775503
>seq57
Length=2428954
Score = 111 bits (122), Expect = 2e-19
Identities = 221/323 (68%), Gaps = 6/323 (2%)
Strand=Plus/Plus
Query 176732 AGACCCTTGATGTGGGAACCGTCGTTATCGGCATCCGTCATGATCATGAGACGACCATAC 176791
|||||||||||||| || || |||| ||| ||| ||||||||||| ||| | |||||
Sbjct 640672 AGACCCTTGATGTGAGAGCCATCGTGATCCTGATCGGTCATGATCATCAGATGGCCATAA 640731
Query 176792 CG-AAGCTCGGAAACATCTTGATAGTCCTTACCCTGTTGAAGACCCAAGATCTTCTTGAG 176850
|| |||| | | |||| |||||||| ||||| |||||||| | ||||||||
Sbjct 640732 CGCAAGC-CTTTAGTATCTGTGTAGTCCTTCTTATGTTGCAGACCCAAAAACTTCTTGAT 640790
Query 176851 ATCGTTGAACTCTTGGTTTGATGTGAGCTGTGTGACAGAGGCATCACGAACATTCTTACA 176910
|| | | ||| ||| || | ||| || || ||||| || ||||| |
Sbjct 640791 ATTCTGAATCTCGGCGTTCTTTGAAATCTGGTCGATGGAAGCATCGCGCACATTGAGAAT 640850
Query 176911 CTTCCCACGAAGAGGGAAGACACCGTAGTGATCGCGACCAACCACAGAGAGACCCGCAAC 176970
||| || ||||| ||||||||||| | | || | || |||| | || ||||
Sbjct 640851 CTTACCCCGAAGTGGGAAGACACCAAACAGGTCTGGGTTGACAACAGCTCGCCCTGCAAG 640910
Query 176971 CGCGAGCGTTTTCGCAGAATCACCCTCTGTCACGATGAGTGTACACTTGCCAGATTGTGC 177030
|| ||| ||||| ||||| ||||||| |||||| || |||||| || || |
Sbjct 640911 AGCAAGCAAGGCGGCAGAGTCACCTTCTGTCAAGATGAGCGTGCACTTG--TGACCGTCC 640968
Query 177031 --CGTACCCGCCTTGTTCGCATC 177051
|||||| |||||||| || ||
Sbjct 640969 TTCGTACCGGCCTTGTTGGCGTC 640991
>seq11
Length=1109632
Score = 111 bits (122), Expect = 2e-19
Identities = 116/150 (77%), Gaps = 2/150 (1%)
Strand=Plus/Plus
Query 102183 CGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGC-GCTAT 102241
|| ||| | |||||||| ||||||||||||||||||||||| | ||| ||| |||||
Sbjct 842665 CGTCTCATTGCATTTGCCGCCGTTGAGGGTATCTTCTTCTCTGGAT-CTTTTGCTGCTAT 842723
Query 102242 TTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTC 102301
| ||||| ||||| || ||||||||| | || ||| ||||| |||||||| |||||
Sbjct 842724 CTTCTGGCTGAAGAAACGTGGTCTCATGGCCGGGCTCACATTCTCGAACGAGCTCATCTC 842783
Query 102302 TCGTGACGAGGGACTCCACCAAGAGTTTGC 102331
||||| ||||| | ||| ||| || ||
Sbjct 842784 CCGTGATGAGGGCATGCACACAGACTTCGC 842813
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 620741290422960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |