Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236685.1_202017-07-
28] 143 sequences; 29,909,557 total letters
Query= NC_019495.1
Length=290304
Score E
Sequences producing significant alignments: (Bits) Value
seq11 181 2e-40
seq50 159 6e-34
>seq11
Length=1109632
Score = 181 bits (200), Expect = 2e-40
Identities = 561/862 (65%), Gaps = 34/862 (4%)
Strand=Plus/Plus
Query 25477 ATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGATCTG 25536
|||||| | |||||||| ||||| | |||| |||||| || || ||||||||||||
Sbjct 842260 ATATGGCAAATGTACAAAAAGGCCGAGGCCTCATTCTGGACAGCTGAGGAGATTGATCTG 842319
Query 25537 GCCAAGGACATGGACGGCTGGTACGCTCTATCCAAAGACGA-GCAGCATT-TTC-TCAAG 25593
| ||||| | ||| |||| || | | ||| ||||| | | ||| ||| ||
Sbjct 842320 TCGAAGGATCTCCACGACTGGAACAAGCGACTCAACGACGACGAACGATTCTTCATCTCA 842379
Query 25594 TACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGAGA 25653
|||| | |||||||| || || || ||||| || || |||||||| || |||| |
Sbjct 842380 CACGTCCTCGCATTCTTCGCCGCATCCGATGGCATTGTCAACGAGAACCTCGTCGAGCGC 842439
Query 25654 TTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGATGGCCATC 25713
|||| | || |||||| | |||||| || |||||||| |||||||| ||
Sbjct 842440 TTCAGCTCTGAGGTGCAGATCCCGGAGGCACGATGCTTCTACGGCTTCCAGATCATGATG 842499
Query 25714 GAAAATGTGCACTCTGAGGTGTATGCCAAGCTTCTGAT---GACGTACATTA--CAGACG 25768
|| || | ||||| ||| ||| || ||||| || || ||||| | || |
Sbjct 842500 GAGAACATCCACTCCGAGACATATTCC---CTTCTCATCGATACATACATCAGCGAGCCA 842556
Query 25769 TCGCCGAGAGAGATCGGCTGTTTGGTGCCATCGAGCACATACCCAGCATCAAGAGGAAGG 25828
|| | || | || ||||| ||||||||| |||| || ||||| |||||||
Sbjct 842557 AAGCAGCGA-ACAT-ACCTGTTCAATGCCATCGACAACATCCCATGCATCCGCAGGAAGG 842614
Query 25829 CGCGGTGGGCCATGAAGTGGATCAACAGCCAGAGCGCTACGTTTGGCGAGCGGCTGGTAG 25888
| ||||| || ||||| | ||| | | || || | | || || | |
Sbjct 842615 CTGACTGGGCGTTGCGATGGATTTCTGACAAGAACTCGACATTCGCCCTCCGTCTCATTG 842674
Query 25889 CCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTGGCTCA 25948
| ||||| || || ||||| ||||| ||| || || ||||| || ||||||||||| |
Sbjct 842675 CATTTGCCGCCGTTGAGGGTATCTTCTTCTCTGGATCTTTTGCTGCTATCTTCTGGCTGA 842734
Query 25949 AGCAGAAGGGGAC-CATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGACGAG 26007
|| | | | || | |||| ||||||| || || |||||||||||| | | || |||
Sbjct 842735 AG-AAACGTGGTCTCATGGCCGGGCTCACATTCTCGAACGAGCTCATCTCCCGTGATGAG 842793
Query 26008 GGTCTCCACAGAGATTTTGCCTGCCTGCTCTACACGGGCCACTTGCTCCACAAACCTTCT 26067
|| | |||| ||| || |||||||| || | | || || || |||| ||
Sbjct 842794 GGCATGCACACAGACTTCGCCTGCCTTCTGTTCTCG---CATCTGAAGAACAAGCCGAAC 842850
Query 26068 CAAGAGACCGTCTACAGTATCATCAAAGAGGCTGTGGAGATCGAGAAGGAGTTTCNNNNN 26127
|| | || | || ||||||| ||||| || ||||||| |||||||
Sbjct 842851 CAGGCCCTTGTGCAGAGCATCATCACCGAGGCCGTCACGATCGAGCAGGAGTTCTTGACA 842910
Query 26128 NNNNNNNNNNNNNNNNNNNNNNTGGGCATGAACAACAGACTCATGAGCCAATACATTGAG 26187
|||| |||||| | |||||| |||||||||||
Sbjct 842911 GACGCTCTTCCATGCAAGCTTCTGGGGATGAACGCTGGCCTCATGTCACAATACATTGAA 842970
Query 26188 TATGTGGCCGACCATCTGCTGTGCCAGCTGGGACTCG----CCAGA--CTCTACAGTACG 26241
| || ||||| | || |||| ||| ||||| | ||| |||||| |||
Sbjct 842971 TTCGTCGCCGATCGCCTACTGT------TGGCACTCGGCAACAAGAAGTTCTACA--ACG 843022
Query 26242 C--CTAACCCGTTCGACTTTATGGAAAACATATCGTTGGAAGGGAAGACCAACTTCTTTG 26299
| | ||||| |||||||| ||||| ||||| ||| ||| || |||||||||||||| |
Sbjct 843023 CCACCAACCCCTTCGACTTCATGGAGAACATTTCGCTGGGCGGCAAGACCAACTTCTTCG 843082
Query 26300 AAAAGAGGGTCGGCGACTATCA 26321
| ||| | || ||||| || ||
Sbjct 843083 AGAAGCGTGTTGGCGAGTACCA 843104
>seq50
Length=820670
Score = 159 bits (176), Expect = 6e-34
Identities = 666/1035 (64%), Gaps = 51/1035 (5%)
Strand=Plus/Minus
Query 221371 GTACGACTCGTAGGGACCGTACAGTTCGGCCTGGGCGCAAGACTGCGTCAGG-GCAGCGT 221429
||| | |||||| |||||| | || || | |||| || || ||| | ||||| |
Sbjct 775297 GTATGTCTCGTAAGGACCGAGCTTCTCAGCAAGCTCGCATGAA-GCCTCAAGAGCAGCAT 775239
Query 221430 GGTAGATGGTCTCAAAGATCATCTTGTTGAGTCTCTTGGCCTCGGGAGAAGTGAAGGGCA 221489
| |||||||||||||| ||| |||| || ||||||||| || || ||| ||||
Sbjct 775238 GATAGATGGTCTCAAAAATCTGGATGTTAAGCTCCTTGGCCTCAGGCGAGTCGAATGGCA 775179
Query 221490 TACGCAGCATCTGAAAGACGTCGGCCAGTCCCTGTACTCCGATACCGATGGGCCTGTGTC 221549
| || || | ||| | || || || || | || || | ||| ||||| | ||| |
Sbjct 775178 TGCGGAGAGCCAAGAAGGCATCAGCAAGACCGTTGACACCAAGACCAATGGGTCGGTGGC 775119
Query 221550 TCCTGTTGGAAGCGGCCGCTTCTGGCACGGGATAAAAGTTGACGTCGATCAGATTGTTGA 221609
|||| || ||||| || || || |||||| ||||| ||||| |
Sbjct 775118 GGAAGTTGCTCTTTCGTGCCTCTGGTACTGGGTAGTAGTTGATCTCGATGGTCTTGTTCA 775059
Query 221610 GGTTCAGAGTGATGACTTTAACCACCTCGGTCAGCTTCTGGTGATTGAACACCAA---CT 221666
|||| | |||| ||||| |||||| || |||| | | || ||| ||
Sbjct 775058 GGTTACGTGTGACCACTTTGGTGACCTCGTGAAGTTTCTTGAAGTCAAAAACCTCGTTCT 774999
Query 221667 CGCCGCCGTCGTGGAGGGGTTCCACAA-AAGCGTTTAGGGCAACGCTGGCCAGGTTACAC 221725
|| | || ||| | ||| || | ||||| || ||||| || ||
Sbjct 774998 CGATGTCGACGTAGGTGGG---CAGAGCAAGCG--------AA-----GCCAGATTGCAG 774955
Query 221726 ACGGCCACCTCGTCCTTGTTG--GTATACTGTATGATCTCTGTACAGAGGTTGCTGCACT 221783
|| || ||||| || || | | |||| |||||||| || || | || || ||
Sbjct 774954 ACAGCGACCTCATC--TGGAGCAGAGTACTCCATGATCTCAGTGCACAAATTAGAGCTCT 774897
Query 221784 TGATGGTCCCCAGGTGATTGTGATTAGACTTGCGATTGGCAGCGTCCTTGTAGAGCATAA 221843
||||||| || || | || ||||| |||||| ||||| ||||||||||| || || |
Sbjct 774896 TGATGGTGCCAAGATTCTTCTGATTGCTCTTGCGGTTGGCGGCGTCCTTGTACAGAATGA 774837
Query 221844 AGGGACCGCCAGTCTCCAGCTGAGCCACCAGAATCTTGTCCCAGAGTTCTCTG-GCGCTC 221902
| || ||| ||||| ||| ||| | ||||| | ||| | || |||| || |
Sbjct 774836 AAGGTGTGCCGGTCTCGGTCTGCGCCTCGAGAATAGCATACCATATTT-TCTGAGCACGA 774778
Query 221903 ACCGTCCTCTTGACTGCACCCTCGGTCTTT-TCATACCCGGTATAGAGCATGTCAAACTT 221961
|||||| | || || | | ||| | ||||| | || ||| | ||||
Sbjct 774777 ACCGTC----TCACGGCCCTTGCCTTCTCTCTCATAACGCTCGTACAGCTCCTTGAACTC 774722
Query 221962 TTCACCGTACGCCTCGTCCAGGCCTGGACACCTGGCGGGACACATCAGACTCCA-GTGCT 222020
|||||||| | || ||| || || || | ||| ||||||||| |||| ||||
Sbjct 774721 GTCACCGTAAACATCCGACAGACCAGGGCATTCGTTGGGGCACATCAGAGTCCAAGTGCC 774662
Query 222021 TGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATCCACAGCGCCTGAAAGAGATCTC 222080
||| | || ||| | |||||| ||||| || || ||||| || || | || | ||| |
Sbjct 774661 -GTTCTGTTCGACACGCTGCATAAAGAGATCGGGAATCCAGAGAGCGTAGAACAAATCGC 774603
Query 222081 TGGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGATCCAAAAACTCAAAAATGTCAG 222140
| || || ||| || | ||| || | || |||| |||| | | ||| |
Sbjct 774602 GCGCACGAACTTCTTCCTTTCCATGGTTCTTGCGAAGGTCCATGAACTGCATGACGTCTG 774543
Query 222141 CGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGTCGCTTGTTGCCACCCTGATCCA 222200
| ||||||||||| || |||| ||| | ||| || || ||||||||||||||||| |
Sbjct 774542 CATGCCACGGCTCAAGGTAGATGGCAAAAGCACCTGGACGCTTGTTGCCACCCTGGT--- 774486
Query 222201 CCATCCTCTCCAG-AGCGTTG---AAGATGCGAAGGGTCGGTACCAGTCCGTTGGATCGA 222256
|| | | | || || |||| ||| || || | ||||| || |||||||||
Sbjct 774485 -CAACGTAACGAGCAGTGTTGTTATAGACTCGTAGCATTGGTACAAGACCGTTGGATGTG 774427
Query 222257 CCGTTGGTGCCCTTAATGTACGCACCGCCGGCCCTCAGGTT----ACTGGCAGACATGCC 222312
||||| ||||| |||||| | || |||||| | ||| || | ||| ||
Sbjct 774426 CCGTTTGTGCCGCCAATGTATGAGCCTGTGGCCCTGATGTTGTGAACATGAAGA----CC 774371
Query 222313 GATACCACCGGCGTGTTTCGAGATCATGGCGCAGCTCTTGAGAGTGTCCATGATGCCCTC 222372
||||| || |||| || ||||||||||| || ||||||| || || ||| || ||
Sbjct 774370 AATACCGCCAGCGTTCTTGGAGATCATGGCACATATCTTGAGGGTATCGTAGATACCATC 774311
Query 222373 CATAGAGTCCTCCTT 222387
|| ||| |||||
Sbjct 774310 AATGCTGTCATCCTT 774296
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 928843139689920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |