Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236685.1_202017-07- 28] 143 sequences; 29,909,557 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq11 181 2e-40 seq50 159 6e-34 >seq11 Length=1109632 Score = 181 bits (200), Expect = 2e-40 Identities = 561/862 (65%), Gaps = 34/862 (4%) Strand=Plus/Plus Query 25477 ATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGATCTG 25536 |||||| | |||||||| ||||| | |||| |||||| || || |||||||||||| Sbjct 842260 ATATGGCAAATGTACAAAAAGGCCGAGGCCTCATTCTGGACAGCTGAGGAGATTGATCTG 842319 Query 25537 GCCAAGGACATGGACGGCTGGTACGCTCTATCCAAAGACGA-GCAGCATT-TTC-TCAAG 25593 | ||||| | ||| |||| || | | ||| ||||| | | ||| ||| || Sbjct 842320 TCGAAGGATCTCCACGACTGGAACAAGCGACTCAACGACGACGAACGATTCTTCATCTCA 842379 Query 25594 TACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGAGA 25653 |||| | |||||||| || || || ||||| || || |||||||| || |||| | Sbjct 842380 CACGTCCTCGCATTCTTCGCCGCATCCGATGGCATTGTCAACGAGAACCTCGTCGAGCGC 842439 Query 25654 TTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGATGGCCATC 25713 |||| | || |||||| | |||||| || |||||||| |||||||| || Sbjct 842440 TTCAGCTCTGAGGTGCAGATCCCGGAGGCACGATGCTTCTACGGCTTCCAGATCATGATG 842499 Query 25714 GAAAATGTGCACTCTGAGGTGTATGCCAAGCTTCTGAT---GACGTACATTA--CAGACG 25768 || || | ||||| ||| ||| || ||||| || || ||||| | || | Sbjct 842500 GAGAACATCCACTCCGAGACATATTCC---CTTCTCATCGATACATACATCAGCGAGCCA 842556 Query 25769 TCGCCGAGAGAGATCGGCTGTTTGGTGCCATCGAGCACATACCCAGCATCAAGAGGAAGG 25828 || | || | || ||||| ||||||||| |||| || ||||| ||||||| Sbjct 842557 AAGCAGCGA-ACAT-ACCTGTTCAATGCCATCGACAACATCCCATGCATCCGCAGGAAGG 842614 Query 25829 CGCGGTGGGCCATGAAGTGGATCAACAGCCAGAGCGCTACGTTTGGCGAGCGGCTGGTAG 25888 | ||||| || ||||| | ||| | | || || | | || || | | Sbjct 842615 CTGACTGGGCGTTGCGATGGATTTCTGACAAGAACTCGACATTCGCCCTCCGTCTCATTG 842674 Query 25889 CCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTGGCTCA 25948 | ||||| || || ||||| ||||| ||| || || ||||| || ||||||||||| | Sbjct 842675 CATTTGCCGCCGTTGAGGGTATCTTCTTCTCTGGATCTTTTGCTGCTATCTTCTGGCTGA 842734 Query 25949 AGCAGAAGGGGAC-CATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGACGAG 26007 || | | | || | |||| ||||||| || || |||||||||||| | | || ||| Sbjct 842735 AG-AAACGTGGTCTCATGGCCGGGCTCACATTCTCGAACGAGCTCATCTCCCGTGATGAG 842793 Query 26008 GGTCTCCACAGAGATTTTGCCTGCCTGCTCTACACGGGCCACTTGCTCCACAAACCTTCT 26067 || | |||| ||| || |||||||| || | | || || || |||| || Sbjct 842794 GGCATGCACACAGACTTCGCCTGCCTTCTGTTCTCG---CATCTGAAGAACAAGCCGAAC 842850 Query 26068 CAAGAGACCGTCTACAGTATCATCAAAGAGGCTGTGGAGATCGAGAAGGAGTTTCNNNNN 26127 || | || | || ||||||| ||||| || ||||||| ||||||| Sbjct 842851 CAGGCCCTTGTGCAGAGCATCATCACCGAGGCCGTCACGATCGAGCAGGAGTTCTTGACA 842910 Query 26128 NNNNNNNNNNNNNNNNNNNNNNTGGGCATGAACAACAGACTCATGAGCCAATACATTGAG 26187 |||| |||||| | |||||| ||||||||||| Sbjct 842911 GACGCTCTTCCATGCAAGCTTCTGGGGATGAACGCTGGCCTCATGTCACAATACATTGAA 842970 Query 26188 TATGTGGCCGACCATCTGCTGTGCCAGCTGGGACTCG----CCAGA--CTCTACAGTACG 26241 | || ||||| | || |||| ||| ||||| | ||| |||||| ||| Sbjct 842971 TTCGTCGCCGATCGCCTACTGT------TGGCACTCGGCAACAAGAAGTTCTACA--ACG 843022 Query 26242 C--CTAACCCGTTCGACTTTATGGAAAACATATCGTTGGAAGGGAAGACCAACTTCTTTG 26299 | | ||||| |||||||| ||||| ||||| ||| ||| || |||||||||||||| | Sbjct 843023 CCACCAACCCCTTCGACTTCATGGAGAACATTTCGCTGGGCGGCAAGACCAACTTCTTCG 843082 Query 26300 AAAAGAGGGTCGGCGACTATCA 26321 | ||| | || ||||| || || Sbjct 843083 AGAAGCGTGTTGGCGAGTACCA 843104 >seq50 Length=820670 Score = 159 bits (176), Expect = 6e-34 Identities = 666/1035 (64%), Gaps = 51/1035 (5%) Strand=Plus/Minus Query 221371 GTACGACTCGTAGGGACCGTACAGTTCGGCCTGGGCGCAAGACTGCGTCAGG-GCAGCGT 221429 ||| | |||||| |||||| | || || | |||| || || ||| | ||||| | Sbjct 775297 GTATGTCTCGTAAGGACCGAGCTTCTCAGCAAGCTCGCATGAA-GCCTCAAGAGCAGCAT 775239 Query 221430 GGTAGATGGTCTCAAAGATCATCTTGTTGAGTCTCTTGGCCTCGGGAGAAGTGAAGGGCA 221489 | |||||||||||||| ||| |||| || ||||||||| || || ||| |||| Sbjct 775238 GATAGATGGTCTCAAAAATCTGGATGTTAAGCTCCTTGGCCTCAGGCGAGTCGAATGGCA 775179 Query 221490 TACGCAGCATCTGAAAGACGTCGGCCAGTCCCTGTACTCCGATACCGATGGGCCTGTGTC 221549 | || || | ||| | || || || || | || || | ||| ||||| | ||| | Sbjct 775178 TGCGGAGAGCCAAGAAGGCATCAGCAAGACCGTTGACACCAAGACCAATGGGTCGGTGGC 775119 Query 221550 TCCTGTTGGAAGCGGCCGCTTCTGGCACGGGATAAAAGTTGACGTCGATCAGATTGTTGA 221609 |||| || ||||| || || || |||||| ||||| ||||| | Sbjct 775118 GGAAGTTGCTCTTTCGTGCCTCTGGTACTGGGTAGTAGTTGATCTCGATGGTCTTGTTCA 775059 Query 221610 GGTTCAGAGTGATGACTTTAACCACCTCGGTCAGCTTCTGGTGATTGAACACCAA---CT 221666 |||| | |||| ||||| |||||| || |||| | | || ||| || Sbjct 775058 GGTTACGTGTGACCACTTTGGTGACCTCGTGAAGTTTCTTGAAGTCAAAAACCTCGTTCT 774999 Query 221667 CGCCGCCGTCGTGGAGGGGTTCCACAA-AAGCGTTTAGGGCAACGCTGGCCAGGTTACAC 221725 || | || ||| | ||| || | ||||| || ||||| || || Sbjct 774998 CGATGTCGACGTAGGTGGG---CAGAGCAAGCG--------AA-----GCCAGATTGCAG 774955 Query 221726 ACGGCCACCTCGTCCTTGTTG--GTATACTGTATGATCTCTGTACAGAGGTTGCTGCACT 221783 || || ||||| || || | | |||| |||||||| || || | || || || Sbjct 774954 ACAGCGACCTCATC--TGGAGCAGAGTACTCCATGATCTCAGTGCACAAATTAGAGCTCT 774897 Query 221784 TGATGGTCCCCAGGTGATTGTGATTAGACTTGCGATTGGCAGCGTCCTTGTAGAGCATAA 221843 ||||||| || || | || ||||| |||||| ||||| ||||||||||| || || | Sbjct 774896 TGATGGTGCCAAGATTCTTCTGATTGCTCTTGCGGTTGGCGGCGTCCTTGTACAGAATGA 774837 Query 221844 AGGGACCGCCAGTCTCCAGCTGAGCCACCAGAATCTTGTCCCAGAGTTCTCTG-GCGCTC 221902 | || ||| ||||| ||| ||| | ||||| | ||| | || |||| || | Sbjct 774836 AAGGTGTGCCGGTCTCGGTCTGCGCCTCGAGAATAGCATACCATATTT-TCTGAGCACGA 774778 Query 221903 ACCGTCCTCTTGACTGCACCCTCGGTCTTT-TCATACCCGGTATAGAGCATGTCAAACTT 221961 |||||| | || || | | ||| | ||||| | || ||| | |||| Sbjct 774777 ACCGTC----TCACGGCCCTTGCCTTCTCTCTCATAACGCTCGTACAGCTCCTTGAACTC 774722 Query 221962 TTCACCGTACGCCTCGTCCAGGCCTGGACACCTGGCGGGACACATCAGACTCCA-GTGCT 222020 |||||||| | || ||| || || || | ||| ||||||||| |||| |||| Sbjct 774721 GTCACCGTAAACATCCGACAGACCAGGGCATTCGTTGGGGCACATCAGAGTCCAAGTGCC 774662 Query 222021 TGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATCCACAGCGCCTGAAAGAGATCTC 222080 ||| | || ||| | |||||| ||||| || || ||||| || || | || | ||| | Sbjct 774661 -GTTCTGTTCGACACGCTGCATAAAGAGATCGGGAATCCAGAGAGCGTAGAACAAATCGC 774603 Query 222081 TGGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGATCCAAAAACTCAAAAATGTCAG 222140 | || || ||| || | ||| || | || |||| |||| | | ||| | Sbjct 774602 GCGCACGAACTTCTTCCTTTCCATGGTTCTTGCGAAGGTCCATGAACTGCATGACGTCTG 774543 Query 222141 CGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGTCGCTTGTTGCCACCCTGATCCA 222200 | ||||||||||| || |||| ||| | ||| || || ||||||||||||||||| | Sbjct 774542 CATGCCACGGCTCAAGGTAGATGGCAAAAGCACCTGGACGCTTGTTGCCACCCTGGT--- 774486 Query 222201 CCATCCTCTCCAG-AGCGTTG---AAGATGCGAAGGGTCGGTACCAGTCCGTTGGATCGA 222256 || | | | || || |||| ||| || || | ||||| || ||||||||| Sbjct 774485 -CAACGTAACGAGCAGTGTTGTTATAGACTCGTAGCATTGGTACAAGACCGTTGGATGTG 774427 Query 222257 CCGTTGGTGCCCTTAATGTACGCACCGCCGGCCCTCAGGTT----ACTGGCAGACATGCC 222312 ||||| ||||| |||||| | || |||||| | ||| || | ||| || Sbjct 774426 CCGTTTGTGCCGCCAATGTATGAGCCTGTGGCCCTGATGTTGTGAACATGAAGA----CC 774371 Query 222313 GATACCACCGGCGTGTTTCGAGATCATGGCGCAGCTCTTGAGAGTGTCCATGATGCCCTC 222372 ||||| || |||| || ||||||||||| || ||||||| || || ||| || || Sbjct 774370 AATACCGCCAGCGTTCTTGGAGATCATGGCACATATCTTGAGGGTATCGTAGATACCATC 774311 Query 222373 CATAGAGTCCTCCTT 222387 || ||| ||||| Sbjct 774310 AATGCTGTCATCCTT 774296 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928843139689920