Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236685.1_202017-07- 28] 143 sequences; 29,909,557 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq50 154 4e-32 seq57 118 3e-21 seq72 96.9 1e-14 seq90 86.0 2e-11 >seq50 Length=820670 Score = 154 bits (170), Expect = 4e-32 Identities = 558/867 (64%), Gaps = 11/867 (1%) Strand=Plus/Minus Query 155640 ATCTCACAGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGTTAGATTTACTG 155699 |||||| ||||| ||||| |||||||||||||| | ||||||||| || || | | Sbjct 774921 ATCTCAGTGCACAAATTAGAGCTCTTGATGGTGCCAAGATTCTTCTGATTGCTCTTGCGG 774862 Query 155700 TTACAAGCATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGTGCGTCCAGAATC 155759 || || |||||||| |||||| | || || || ||||| |||| || || ||||| Sbjct 774861 TTGGCGGCGTCCTTGTACAGAATGAAAGGTGTGCCGGTCTCGGTCTGCGCCTCGAGAATA 774802 Query 155760 TTTAGCCAGAGGTCACGGGCATTAATTTGCTTGTTGTATCTGCCTTCCGACTCATATTTC 155819 ||| | | | ||| || || | ||||||| |||||| | Sbjct 774801 GCATACCATATTTTCTGAGCACGAACCGTCTCACGGCCCTTGCCTTCTCTCTCATAACGC 774742 Query 155820 ATATACAGCGTTCGGTAATCCTCACCGTAACAATCACTCAGTCCAGGGCACTTATCGGGG 155879 |||||| | | || ||||||||| ||| ||| |||||||| | | |||| Sbjct 774741 TCGTACAGCTCCTTGAACTCGTCACCGTAAACATCCGACAGACCAGGGCATTCGTTGGGG 774682 Query 155880 CAAAACAGCGACCAAATTTTATTACCGATT-ACACGCTCCATAAATACATCACTCGCCCA 155938 || | ||| | |||| | || | | | ||||||| |||||| | ||| ||| Sbjct 774681 CACATCAGAGTCCAAGTGCCGTT-CTGTTCGACACGCTGCATAAAGAGATCGGGAATCCA 774623 Query 155939 AATAGCATAGAAAAGGTCCCTTGCCTTTGACTCCTCATCGCCGTGATTCTTCCGTAGCTC 155998 | ||| ||||| | || | || || || | || || ||||| || || || Sbjct 774622 GAGAGCGTAGAACAAATCGCGCGCACGAACTTCTTCCTTTCCATGGTTCTTGCGAAGGTC 774563 Query 155999 TAAGAATTCCTCAATATCAGGATGGTGTGGCTCCAGATACATAGCAAAACTACC---ATT 156055 | ||| | | | || | ||| ||||| || || || |||||| ||| | Sbjct 774562 CATGAACTGCATGACGTCTGCATGCCACGGCTCAAGGTAGATGGCAAAAGCACCTGGACG 774503 Query 156056 CCTCTTGCCACCCTGATCTACATACCGAGCAGTCTTATTGAAGACACCTAGCATAGGAAT 156115 | | ||||||||||| || || || |||||||| || || |||| | |||||| || | Sbjct 774502 CTTGTTGCCACCCTGGTCAACGTAACGAGCAGTGTTGTTATAGACTCGTAGCATTGGTAC 774443 Query 156116 AATACCATTGGAAGTGCCATTGGTTCCGCGAATATGCGAACCAGATGAGCGAACATTATG 156175 || ||| ||||| ||||| || || |||| ||| | || || | | | | || || Sbjct 774442 AAGACCGTTGGATGTGCCGTTTGTGCCGCCAATGTATGAGCCTGTGGCCCTGATGTTGTG 774383 Query 156176 AATATGTAGTCCAATACCACCTGACCATTTAGAAATTTGAGCGCATTCCTTTACAGTATT 156235 || ||| || |||||||| || | || || || || ||| ||| | |||| Sbjct 774382 AACATGAAGACCAATACCGCCAGCGTTCTTGGAGATCATGGCACATATCTTGAGGGTATC 774323 Query 156236 GAAAATACCTTCAATAGAATCATCTTCCATTGATAGTAGATAGCACGAACTTAATTGAGG 156295 | | ||||| ||||| ||||| | ||| | | | |||| || || || | Sbjct 774322 GTAGATACCATCAATGCTGTCATCCTTCATGGCCACCAAGAAGCAGGATGCTAGCTGCGC 774263 Query 156296 TCGTGGTGTTCCAGCGTTGAATAGTGTAGGTGTTGCATGAATAAAATACTTATTAGACAT 156355 |||| || ||||| |||| ||||| || | ||||| | || ||||| ||||| Sbjct 774262 CTGTGGGGTACCAGCACTGAAAAGTGTTGGCGAAGCATGTGTGAAGTACTTCAACGACAT 774203 Query 156356 ATAATCGTATGTCTCCTTAAT--CTTC-TCAAGATTAGACCCGTGAATACAGATAGAGAC 156412 || | ||||||||| ||| || | |||| | ||| ||||| | || || || Sbjct 774202 GTAGTTGTATGTCTC---AATCGCTGCTTCAATGTCTTCCCCATGAATGCCGACAGCCAC 774146 Query 156413 CCTCATCCACATATGCTGAGGACGCTCTACAATCACTCCATCAATTCGCAGAAGGTATGC 156472 | ||| ||| || || || | ||| ||| | || ||||||| |||||||||| Sbjct 774145 ACGCATGATCATCTGTTGCGGTCTCTCGGCAACCTTGCCGTCAATTCTGAGAAGGTATGA 774086 Query 156473 GCGTTCCAGAGTTTTAAACCCGAAATA 156499 || |||||||| || || ||||| || Sbjct 774085 TCGCTCCAGAGTCTTGAAGCCGAAGTA 774059 >seq57 Length=2428954 Score = 118 bits (130), Expect = 3e-21 Identities = 173/241 (72%), Gaps = 4/241 (2%) Strand=Plus/Plus Query 302563 ATCATAATGTCTTCCATACTCTTGATTAAACGACGCTGAATATAACCAGTTGTAGATGTT 302622 ||||| | ||||||| | ||| | || ||||||||| || |||||||| | || Sbjct 1202213 ATCATGACTTCTTCCAAAGCCTTCACTAGACGACGCTGGATGTAACCAGTCTCTGCAGTC 1202272 Query 302623 TTTACAGCTGTATCAATTAGACCAACACGACCACCCATAGCATGGAAGAATAGCTCTTCC 302682 || ||||| |||||||| ||||| ||||||||||||| || |||||||| | ||||| Sbjct 1202273 TTGACAGCGGTATCAATGAGACCTTCACGACCACCCATGGCGTGGAAGAAGAACTCTTGG 1202332 Query 302683 GGTCGT--AGCCCCCCAATAAAGGAGCTCTCAACGAAACCACGCGCCTCGGGCGAATCGT 302740 ||| || |||| | | | | ||| |||| |||||||| | | | ||||| | || Sbjct 1202333 GGT-GTCAAGCCACGC-AGGTATGAGTTCTCGACGAAACCTCTAGATGCAGGCGAGTAGT 1202390 Query 302741 CGAACTTGGTAAAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGGGATACGCTTTCCAT 302800 || ||||| ||| || |||||| | || || ||||| | |||| |||||| || | Sbjct 1202391 CGTCCTTGGGAAAATGCGGCAGGACTCGGTACTTGAAGCCGAACGGGAGACGCTTGCCTT 1202450 Query 302801 C 302801 | Sbjct 1202451 C 1202451 >seq72 Length=236765 Score = 96.9 bits (106), Expect = 1e-14 Identities = 113/150 (75%), Gaps = 2/150 (1%) Strand=Plus/Plus Query 251839 TGGGCGATAGTCATACGACTGGGAATAGCATGGGGATTGATGATGATGTCGGGTTTCAGT 251898 || || || |||||||| |||||| || || || |||||||| ||||| ||| | || Sbjct 219053 TGAGCAATTGTCATACGCGAGGGAATGGCGTGAGGGTTGATGATAATGTCCGGTGTGAGG 219112 Query 251899 CCATCAGCAGTGAAGGGCATATCCTTTTCCTCAATAA-TGTTTCCAATAGTTCCCTTTTG 251957 || || || ||||| ||||| || | || || ||| || | |||| || ||||| || Sbjct 219113 CCGTCCGCTGTGAATGGCATGTCTTCTTG-TCGATAGGTGATACCAACGGTACCCTTCTG 219171 Query 251958 TCCGTGACGAGAACTGAACTTATCACCAAT 251987 |||||||||||| |||||||||||||| Sbjct 219172 TCCGTGACGAGATGCAAACTTATCACCAAT 219201 >seq90 Length=1552754 Score = 86.0 bits (94), Expect = 2e-11 Identities = 88/115 (77%), Gaps = 0/115 (0%) Strand=Plus/Plus Query 302573 CTTCCATACTCTTGATTAAACGACGCTGAATATAACCAGTTGTAGATGTTTTTACAGCTG 302632 ||||||| | |||||| |||| | ||| | || |||| | ||| ||||| || |||| Sbjct 716703 CTTCCATGCCCTTGATCAAACATCTCTGCAGGTATCCAGATCGAGACGTTTTGACTGCTG 716762 Query 302633 TATCAATTAGACCAACACGACCACCCATAGCATGGAAGAATAGCTCTTCCGGTCG 302687 ||||||| ||||| | |||||| ||||||| |||||||| ||||| ||||| Sbjct 716763 TATCAATGAGACCTTCGCGACCAGCCATAGCGTGGAAGAAGTACTCTTGAGGTCG 716817 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471814903354191