Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236685.1_202017-07-
28] 143 sequences; 29,909,557 total letters
Query= NC_027213.1
Length=214699
Score E
Sequences producing significant alignments: (Bits) Value
seq11 163 4e-35
seq50 147 3e-30
>seq11
Length=1109632
Score = 163 bits (180), Expect = 4e-35
Identities = 550/850 (65%), Gaps = 10/850 (1%)
Strand=Plus/Minus
Query 39326 TTTTGGTATTCACCAACGCGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTT 39385
|| ||||| || ||||| || |||||||| || || || ||||| ||| || || ||
Sbjct 843107 TTCTGGTACTCGCCAACACGCTTCTCGAAGAAGTTGGTCTTGCCGCCCAGCGAAATGTTC 843048
Query 39386 TCCATGAAATCAAACGGATTAGTTGCATTATAtttttttttAAATCCTAATTCTGAAATC 39445
|||||||| || || || || || || || || || || || | | | | |
Sbjct 843047 TCCATGAAGTCGAAGGGGTTGGTGGCGTTGTAGAACTTCTTGTTGCCGAGTGCCAACAGT 842988
Query 39446 AATCTATCTGCAACAAATTCTATGTATGTTTTCATCATTTCACAATTCATTCCTATGAGT 39505
| | ||| || || ||||| |||||| | ||| | || ||||| || | ||
Sbjct 842987 AGGCGATCGGCGACGAATTCAATGTATTGTGACATGAGGCCAGCGTTCATCCCCAGAAGC 842928
Query 39506 TTAACTGGTAGAGCCTCCGTTAGAAACTCTTTTTCGATGTCTACGGCCTCTGTTATTATC 39565
|| ||| ||||| || || | ||||| | ||||| |||||||| || || ||
Sbjct 842927 TTGCATGGAAGAGCGTCTGTCAAGAACTCCTGCTCGATCGTGACGGCCTCGGTGATGAT- 842869
Query 39566 GATGTT-ACTACCTCATCACTCGGTGGATGCAATAAATGTTTAAACATTAAGCAGGCGAA 39624
| | | || | | | |||| | | | ||| |||| | |||||||||
Sbjct 842868 GCTCTGCACAAGGGCCTGGTTCGGCTTGTTCTTCAGATGCGAGAACAGAAGGCAGGCGAA 842809
Query 39625 GTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGTCCAGGCAT 39684
||| || | ||||||||| | || | ||||| || |||||||| || | |||
Sbjct 842808 GTCTGTGTGCATGCCCTCATCACGGGAGATGAGCTCGTTCGAGAATGTGAGCCCGGCCAT 842749
Query 39685 TAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAAGATGCCTTC 39744
|||||||| || || ||||| || || ||||||||||||||||| |||||||| || ||
Sbjct 842748 GAGACCACGTTTCTTCAGCCAGAAGATAGCAGCAAAAGATCCAGAGAAGAAGATACCCTC 842689
Query 39745 TACTGCTGCAAATGCAACAAGTCTCTCTCCGTAACTTG---TATCATTATGTATCCACTT 39801
|| || |||||||||| || | || | | | | | | | |||||
Sbjct 842688 AACGGCGGCAAATGCAATGAGACGGAGGGCGAATGTCGAGTTCTTGTCAGAAATCCATCG 842629
Query 39802 CTGTGCCCAATCAGCTTTCTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAGATA 39861
| ||||| ||||| ||| | | || || || | || || ||||| || || |
Sbjct 842628 CAACGCCCAGTCAGCCTTCCTGCGGATGCATGGGATGTTGTCGATGGCATTGAACAGGT- 842570
Query 39862 ATGTT-TTTCATCACTATCTTTAACATATGTATCTATTAACAGACTATACATTTCTGAAT 39920
||||| | | || | | |||||||| || | || ||| | || || |
Sbjct 842569 ATGTTCGCTGCTTTGGCTCGCTGATGTATGTATCGATGAGAAGGGAATATGTCTCGGAGT 842510
Query 39921 GGATGTTTTCAATCGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATTTGTACCT 39980
||||||| || ||| ||||| || ||||| || |||| ||| || | || || ||||
Sbjct 842509 GGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCATCGTGCCTCCGGGATCTGCACCT 842450
Query 39981 CTGAACAAAATCTTTCCGCCAAATTTTCATTCACTATTCCATCACTAGCGGCAAAAAATG 40040
| || | || | || | | || || || || || ||||| ||||| || ||||
Sbjct 842449 CAGAGCTGAAGCGCTCGACGAGGTTCTCGTTGACAATGCCATCGGATGCGGCGAAGAATG 842390
Query 40041 CCAATACATGTTTAATAAAATATTTTTCATCGGGTGTCAAT---TTATTCCAGTCATTGA 40097
| | || ||| || || || ||| ||| | | | || |||||||| | ||
Sbjct 842389 CGAGGACGTGTGAGATGAAGAATCGTTCGTCGTCGTTGAGTCGCTTGTTCCAGTCGTGGA 842330
Query 40098 TATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAACGACGCCTCTGCCTTTTTGTACA 40157
||| || || | ||| | || ||||||||||| || || ||||| |||||||||||||
Sbjct 842329 GATCCTTCGACAGATCAATCTCCTCAGCTGTCCAGAATGAGGCCTCGGCCTTTTTGTACA 842270
Query 40158 TGTTCCATAT 40167
| | ||||||
Sbjct 842269 TTTGCCATAT 842260
>seq50
Length=820670
Score = 147 bits (162), Expect = 3e-30
Identities = 551/858 (64%), Gaps = 22/858 (3%)
Strand=Plus/Minus
Query 69277 GATGCTAGATTACAAACTGCTACCTCATTAGAATTTGCATATTGTATTATCTCTGTACAT 69336
|| || ||||| || || || ||||||| | | | || | || ||||| || ||
Sbjct 774969 GAAGCCAGATTGCAGACAGCGACCTCATCTGGAGCAGAGTACTCCATGATCTCAGTGCAC 774910
Query 69337 AGATTACTACATTTGATAGTCCCCAGATTTTGCTGATTACTCTTTTTGTTACAGGCGTCC 69396
| |||| | ||||| || || ||||| | |||||| ||||| ||| |||||||
Sbjct 774909 AAATTAGAGCTCTTGATGGTGCCAAGATTCTTCTGATTGCTCTTGCGGTTGGCGGCGTCC 774850
Query 69397 TTGTAAAGAATAAACGGAGTACCAGTTTCAATCTGAGATTCGATAATAGATTTCCAAACG 69456
||||| ||||| || || || || || || |||| | |||| ||||| | ||| |
Sbjct 774849 TTGTACAGAATGAAAGGTGTGCCGGTCTCGGTCTGCGCCTCGAGAATAGCATACCATATT 774790
Query 69457 ACCCTAGCATTTA-----TTACGGTC-TTGTAACGCTTCTCTTTTTCATATTGTGTATAT 69510
| |||| | | |||| | ||| ||||||| | |||| | ||
Sbjct 774789 TTCTGAGCACGAACCGTCTCACGGCCCTTGC----CTTCTCTCT--CATAACGCTCGTAC 774736
Query 69511 AGCCGTTCGAATTCATCTCCCCAAACATCATCCAATCCAGGACATTCATTTGGACACATC 69570
||| | ||| || || || ||||||| || ||||| ||||| || || ||||||
Sbjct 774735 AGCTCCTTGAACTCGTCACCGTAAACATCCGACAGACCAGGGCATTCGTTGGGGCACATC 774676
Query 69571 AATGACCACACATCATCATCCTTAACTCGTTTCATAAATAGATCGGGAATCCAAAGAGCT 69630
| | ||| | | | | || || | |||||| |||||||||||||| |||||
Sbjct 774675 AGAGTCCAAGTGCCGTTCTGTTCGACACGCTGCATAAAGAGATCGGGAATCCAGAGAGCG 774616
Query 69631 ATAAAGAGATCTCTGGTTCTATTTTCTTCATTTCCTGTAttttttttAAGATCGAGAAAC 69690
|| | ||| | | | | |||||| ||||| || || ||| || | |||
Sbjct 774615 TAGAACAAATCGCGCGCACGAACTTCTTCCTTTCCATGGTTCTTGCGAAGGTCCATGAAC 774556
Query 69691 TCCATAATATCAGAATGCCATGGTTCTAGATATATCGCCATGACTCCCGGTCGTTTATTT 69750
| ||| | || | |||||| || || || || || || | | || || || || ||
Sbjct 774555 TGCATGACGTCTGCATGCCACGGCTCAAGGTAGATGGCAAAAGCACCTGGACGCTTGTTG 774496
Query 69751 CCTCCCTGATCTATGTATCTGGCAGTGTTATTATAGACTCTCAGCATCGGAATAATACCA 69810
|| ||||| || | ||| | |||||||| |||||||||| ||||| || | || |||
Sbjct 774495 CCACCCTGGTCAACGTAACGAGCAGTGTTGTTATAGACTCGTAGCATTGGTACAAGACCG 774436
Query 69811 TTAGATTTACCATTTGTTCCAGAAATATAACTTCCTCTTGCGCGAATATTACTAATAGAT 69870
|| ||| | || ||||| || ||| || ||| | || | || || || |
Sbjct 774435 TTGGATGTGCCGTTTGTGCCGCCAATGTATGAGCCTGTGGCCCTGATGTTGTGAACATGA 774376
Query 69871 AGACCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAACGTTTCAATGTGTCATATATA 69930
||||| || || || || | || ||||| | ||||| || | || || || |||
Sbjct 774375 AGACCAATACCGCCAGCGTTCTTGGAGATCATGGCACATATCTTGAGGGTATCGTAGATA 774316
Query 69931 CCCTCTATGCTATCATCTATCATG----TTAAGAAGAAAACAGCTAGACATTTGATGATG 69986
|| || ||||| ||||| ||||| |||||| | ||||| || ||
Sbjct 774315 CCATCAATGCTGTCATCCTTCATGGCCACCAAGAAGCAGGATGCTAG----CTGCGCCTG 774260
Query 69987 TATAGTTCCCGCATTAAATAATGTAGGAGATGCGTGAGTGAACCATTTTTCAGA-AAGCA 70045
| || || ||| | || | ||| || || || || ||||| | || || | | |
Sbjct 774259 TGGGGTACCAGCACTGAAAAGTGTTGGCGAAGCATGTGTGAAGTACTTCAACGACATGTA 774200
Query 70046 GATTGTATGTTTCAATAGCTGATTCTATATCCCACTGATGAATTCCTATCGCGACACGCA 70105
| |||||||| ||||| |||| ||| || || | |||||| || | || |||||||
Sbjct 774199 G-TTGTATGTCTCAATCGCTGCTTCAATGTCTTCCCCATGAATGCCGACAGCCACACGCA 774141
Query 70106 TCAACATATGCTGAGGTC 70123
| | ||| || || ||||
Sbjct 774140 TGATCATCTGTTGCGGTC 774123
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 686907572150520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |