Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236685.1_202017-07- 28] 143 sequences; 29,909,557 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq50 187 3e-42 seq11 86.0 8e-12 seq57 84.2 3e-11 >seq50 Length=820670 Score = 187 bits (206), Expect = 3e-42 Identities = 883/1385 (64%), Gaps = 31/1385 (2%) Strand=Plus/Minus Query 110707 GTAGATGTTTGTTGTGTATGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGA 110766 ||| ||||| |||||||||| || ||||| || ||| |||| ||| || | ||| || Sbjct 775504 GTAAATGTTGCTTGTGTATGGCTCGAAGCACTCGTTAAAGCCCATGATCTGCGAGGTCGA 775445 Query 110767 GGCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTCTCCTTGATGCGTTC 110826 |||||||||||| || || | | ||| ||| || | ||| | || ||| | Sbjct 775444 GGCTGTTGGCATCGGCGCAACGAGAAGCGAGTTGCGCACACCGTGCTGGGCGATCTTGCC 775385 Query 110827 CTTGAGAACATCCCAGTCGTAGTTGAGCTTGGTTTCAC-CTT--CCCACATGTCAAACTG 110883 |||||| | ||||||| || || | ||| | ||| |||||||||| |||| Sbjct 775384 CTTGAGTGCGGCCCAGTCCCAG---AGGTCGGTAGGAGTCTTGCCCCACATGTCGTACTG 775328 Query 110884 AAGCACCCCTTGGGACGCGGGAGAACCCTCAAAGGTTTCATAGGAACCTTGGGCTTC--A 110941 ||| | || || || | ||||| || | || || || | ||| | ||||| | Sbjct 775327 GAGCTCGCCCTGCGATACTGGAGAGCCTGGGTATGTCTCGTAAGGACC--GAGCTTCTCA 775270 Query 110942 GCCAATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTC 111001 || | || || ||||| || | || ||||| ||||| ||||| || | || Sbjct 775269 GCAAGCTCGCATGAAGCCTCAAGAGCAGCATGATAGATGGTCTCAAAAATCTGGATGTTA 775210 Query 111002 ATCTCCTTGGCTTCATCTGAATCAAATGCGTAGCGGCACAAAATAAATACATCCGCGAGA 111061 | ||||||||| ||| || || |||| |||| | || |||| || ||| Sbjct 775209 AGCTCCTTGGCCTCAGGCGAGTCGAATGGCATGCGGAGAGCCAAGAAGGCATCAGCAAGA 775150 Query 111062 CCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCA-AC 111120 || | ||||| | |||||| |||| ||| || | || |||||| || ||| || Sbjct 775149 CCGTTGACACCAAGACCAATGGGTCGGTGGCGGAAGTTGCTCTTTCGTGCC-TCTGGTAC 775091 Query 111121 GGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTC 111180 || || | || | || ||| ||| || || || || | || |||| || Sbjct 775090 TGGGTAGTAGTTGATCTCGATGGTCTTGTTCAGGTTACGTGTGACCACTTTGGTGACCTC 775031 Query 111181 ATGAAGTTTTTCATAATCAAAAGTGCGAGTCTCTTCATTGACATACTTTGGAAGGGCGAT 111240 |||||||| | | |||||| |||| | ||| || | || || || | Sbjct 775030 GTGAAGTTTCTTGAAGTCAAAAACCTCGTTCTCGATGTCGACGTAGGTGGGCAGAGCAAG 774971 Query 111241 TGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACA 111300 || |||| |||||| ||||| |||||| | | | |||||| | || || || || Sbjct 774970 CGAAGCCAGATTGCAGACAGCGACCTCATCTGGAGCAGAGTACTCCATGATCTCAGTGCA 774911 Query 111301 TAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTGTTGCACGCATC 111360 || || || ||||| || || || | |||||| || || ||||| |||| || || Sbjct 774910 CAAATTAGAGCTCTTGATGGTGCCAAGATTCTTCTGATTGCTCTTGCGGTTGGCGGCGTC 774851 Query 111361 CTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATAGCCTTCCAAAC 111420 |||||| || ||| | || || || ||||| ||||| | | ||||||||| | ||| | Sbjct 774850 CTTGTACAGAATGAAAGGTGTGCCGGTCTCGGTCTGCGCCTCGAGAATAGCATACCATAT 774791 Query 111421 ATCGGCGGCTGGTACAATGGCGTTGGCCCGTCCCTCCGC-CTCGTACTTTGTGTAGAGGG 111479 | || | || | | ||||| | ||| | | ||| || ||| || Sbjct 774790 TTTCTGAGCACGAACCGTCTCAC-GGCCCTTGCCTTCTCTCTCATAACGCTCGTACAGCT 774732 Query 111480 CTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTT-GTCTGGACAGAAAAGA 111538 | | ||||| ||||| | || || ||||| || || || || || || | ||| Sbjct 774731 CCTTGAACTCGTCACCGTAAACATCCGACAGACCAGG-GCATTCGTTGGGGCACATCAGA 774673 Query 111539 GACCATTGACCACCTTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAA 111598 | ||| || | || || |||| ||| || || || |||||||| || | | Sbjct 774672 GTCCAAGTGCCGTTCTGTTCGACACGCTGCATAAAGAGATCGGGAATCCAGAGAGCGTAG 774613 Query 111599 AAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCC 111658 || | ||| | ||| | ||||| | || ||||| || | || | ||||| | Sbjct 774612 AACAAATCGCGCGCACGAACTTCTTCCTTTCCATGGTTCTTGCGAAGGTCCATGAACTGC 774553 Query 111659 ATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCCCTTTCGACGC------ 111712 |||| || || ||||| |||||||| |||| || | || || | ||||| Sbjct 774552 ATGACGTCTGCATGCCACGGCTCAAGGTAGATGGCAAAAGCACC---TGGACGCTTGTTG 774496 Query 111713 CCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCA 111772 ||| | || | || || || || ||| |||| | || || |||||||| | || ||| Sbjct 774495 CCACCCTGGTCAACGTAACGAGCAGTGTTGTTATAGACTCGTAGCATTGGTACAAGACCG 774436 Query 111773 TCTGATTGACCATTTGTCCCCCGAAT--ACGAGATTTATTGGCTCTCACATCATGGATGT 111830 | ||| || ||||| || | ||| | ||| | |||| || | | || | | Sbjct 774435 TTGGATGTGCCGTTTGTGCCGCCAATGTATGAGCCTG--TGGCCCTGATGTTGTGAACAT 774378 Query 111831 GCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGA 111890 | | |||||||| ||||| ||| ||||| ||||| | | || || | |||| Sbjct 774377 GAAGACCAATACCGCCAGCGTTCTTGGAGATCATGGCACATATCTTGAGGGTATCGTAGA 774318 Query 111891 TACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTG 111950 |||| | || ||| ||||| |||| | | |||||| | | ||||| || Sbjct 774317 TACCATCAATGCTGTCATCCTTCATGGCCACCAAGAAGCAGGATGCTAGCTGCGCCTGTG 774258 Query 111951 GTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTTGG-GACATCTTG 112009 | ||||||||| |||| || ||||| | || || |||| ||| | ||||| | | Sbjct 774257 GGGTACCAGCACTGAAAAGTGTTGGCGAAGCATGTGTGAAG-TACTTCAACGACATGTAG 774199 Query 112010 TCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATTGCGACCCGCATG 112069 | ||||||||| | | | |||||||||||||| || ||||||| || || |||||| Sbjct 774198 TTGTATGTCTCAATCGCTGCTTCAATGTCTTCCCCATGAATGCCGACAGCCACACGCATG 774139 Query 112070 AACAT 112074 | ||| Sbjct 774138 ATCAT 774134 >seq11 Length=1109632 Score = 86.0 bits (94), Expect = 8e-12 Identities = 135/188 (72%), Gaps = 4/188 (2%) Strand=Plus/Minus Query 122677 CCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCTGGCATGAGACCCCGCTTC 122736 |||||||| ||||| || || || || ||||| || || | ||||||||| || ||| Sbjct 842795 CCCTCATCACGGGAGATGAGCTCGTTCGAGAATGTGAGCCCGGCCATGAGACCACGTTTC 842736 Query 122737 TTCAACCAATAAATAGC-GCAGAATGACCCGGAGAAGAAGATACCCTCCACACACGCAAA 122795 |||| ||| | ||||| ||| || || || ||||||||||||||||| || ||||| Sbjct 842735 TTCAGCCAGAAGATAGCAGCAAAA-GATCCAGAGAAGAAGATACCCTCAACGGCGGCAAA 842677 Query 122796 CGCAAAAAGGCGTTCGGCGAAGGAGCGAG-ACTTTGCATCAAACCATTTCATTGCCCATT 122854 |||| || || |||||| | |||| ||| || || |||| || ||||| | Sbjct 842676 TGCAATGAGACGGAGGGCGAATG-TCGAGTTCTTGTCAGAAATCCATCGCAACGCCCAGT 842618 Query 122855 TCGCCTTC 122862 |||||| Sbjct 842617 CAGCCTTC 842610 >seq57 Length=2428954 Score = 84.2 bits (92), Expect = 3e-11 Identities = 144/206 (70%), Gaps = 6/206 (3%) Strand=Plus/Plus Query 182517 AGACCCTTGATGTGAGAACCATCATTATCGGCATCTGTCATAATCATAAGACGACCATAG 182576 ||||||||||||||||| ||||| | ||| ||| ||||| ||||| ||| | ||||| Sbjct 640672 AGACCCTTGATGTGAGAGCCATCGTGATCCTGATCGGTCATGATCATCAGATGGCCATAA 640731 Query 182577 CG-AAG--TTCAGAAACATCTTGGTAGTCTTTTCCTTGTTGAAGACCAAGGATCTTCTTG 182633 || ||| || || |||| |||||| || ||||| ||||| | | ||||||| Sbjct 640732 CGCAAGCCTTTAG---TATCTGTGTAGTCCTTCTTATGTTGCAGACCCAAAAACTTCTTG 640788 Query 182634 AGATCATTGAACTCCTGGTTTGATGTAAGCTGTGCCACCGAAGCGTCCCGAACATTCTTA 182693 | || | | ||| ||| || || ||| | | ||||| || || ||||| | Sbjct 640789 ATATTCTGAATCTCGGCGTTCTTTGAAATCTGGTCGATGGAAGCATCGCGCACATTGAGA 640848 Query 182694 CATTTACCGCGAAGTGGGAACACACC 182719 ||||| ||||||||||| ||||| Sbjct 640849 ATCTTACCCCGAAGTGGGAAGACACC 640874 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628030877392800