Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236685.1_202017-07- 28] 143 sequences; 29,909,557 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq50 293 3e-74 seq11 111 2e-19 seq57 95.1 1e-14 >seq50 Length=820670 Score = 293 bits (324), Expect = 3e-74 Identities = 912/1389 (66%), Gaps = 41/1389 (3%) Strand=Plus/Plus Query 104231 ATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGTCTTGGAGACA 104290 ||| ||||||| ||||| |||| |||||||||||||||||||| | | | |||||| Sbjct 774134 ATGATCATGCGTGTGGCTGTCGGCATTCATGGGGAAGACATTGAAGCAGCGATTGAGACA 774193 Query 104291 TACGACAAGATGTCCCA-AGGTATGTTCATTCACGCAACACCAACCCTCTTCAATGCTGG 104349 ||| || | ||||| | ||| |||| || || | ||||| || |||| |||||| Sbjct 774194 TACAACTACATGTCGTTGAAGTAC-TTCACACATGCTTCGCCAACACTTTTCAGTGCTGG 774252 Query 104350 TACACCA-AGACCC--CAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGACTCAAT 104406 ||| ||| || | | | | ||| |||||| | | |||| ||||| ||| || Sbjct 774253 TACCCCACAGGCGCAGCTAGCATCC---TGCTTCTTGGTGGCCATGAAGGATGACAGCAT 774309 Query 104407 CAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGGGGGTAT 104466 | |||||||| | || || | | ||||| ||||| ||| ||||| ||||| Sbjct 774310 TGATGGTATCTACGATACCCTCAAGATATGTGCCATGATCTCCAAGAACGCTGGCGGTAT 774369 Query 104467 TGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTA--TTCGGGGGACAAATGGT 104524 ||| | || | || | | || |||| | ||| || || | || ||||| || Sbjct 774370 TGGTCTTCATGTTCACAACATCAGGGCCAC--AGGCTCATACATTGGCGGCACAAACGGC 774427 Query 104525 CAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGTAAAT 104584 ||| | ||| || | |||||||| || || | |||| ||| || || || || | Sbjct 774428 ACATCCAACGGTCTTGTACCAATGCTACGAGTCTATAACAACACTGCTCGTTACGTTGAC 774487 Query 104585 CAAGCTGG------GCGTCGAAAGGGATCTATCGCAGTCTATCTTGAGCCATGGCACGCG 104638 || | ||| ||||| | || || | || |||| |||||||| ||||| || Sbjct 774488 CAGGGTGGCAACAAGCGTCCA---GGTGCTTTTGCCATCTACCTTGAGCCGTGGCATGCA 774544 Query 104639 GATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCGCGGTGC-CG 104697 || ||||| ||||| | || | || ||||| || | || || | || ||| || Sbjct 774545 GACGTCATGCAGTTCATGGACCTTCGCAAGAACCATGGAAAGGAAGAAGTTCG-TGCGCG 774603 Query 104698 CGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAGTGG 104757 |||| | |||| ||||||||||||||| |||||||| ||| || | || || ||| || Sbjct 774604 CGATTTGTTCTACGCTCTCTGGATTCCCGATCTCTTTATGCAGCGTGTCGAACAGAACGG 774663 Query 104758 CAATTGGTCTCTCTTTTGTCCAGAC-AAGGCACCTGGTCTCTCCGATGCCGTGGGTGAGG 104816 || |||| |||| | || || || || || |||||||| || |||| ||||| | Sbjct 774664 CACTTGGACTCTGATGTGCCCCAACGAATGC-CCTGGTCTGTCGGATGTTTACGGTGACG 774722 Query 104817 AGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGGTCGGGCGACTGCGACGGTGCCAG 104876 |||| | | || ||| || ||| |||||| || || |||||| | | Sbjct 774723 AGTTCAAGGAGCTGTACGAGCGTTATGAGAGAGAAGGCAAGGGCCGTGAGACGGTTCGTG 774782 Query 104877 CTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATACATGC 104936 || | | ||| | ||||||||| || | || |||||||| || ||||| | ||| | Sbjct 774783 CTCAGAAAATATGGTATGCTATTCTCGAGGCGCAGACCGAGACCGGCACACCTTTCATTC 774842 Query 104937 TTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAGAGTT 104996 | ||||| |||||| |||| ||||| ||||| |||||| | || |||||||| | Sbjct 774843 TGTACAAGGACGCCGCCAACCGCAAGAGCAATCAGAAGAATCTTGGCACCATCAAGAGCT 774902 Query 104997 CCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTGTAACC 105056 | ||| | || || || ||| |||| | | | ||||||| ||||| || || | Sbjct 774903 CTAATTTGTGCACTGAGATCATGGAGTACTCTGCTCCAGATGAGGTCGCTGTCTGCAATC 774962 Query 105057 TCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGACATTTGATTATGAAA 105116 | || || | ||||| |||| || || || |||| || ||||| | | | Sbjct 774963 TGGCTTCGCTTGCTCTGCCCACCTACGTCGACATCGAGAACGAGGTTTTTGACTTCAAGA 775022 Query 105117 AACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAACAGAGTTATTGATAGAAATT 105176 |||| ||||| || || ||| ||||| ||||| |||| || || | || | Sbjct 775023 AACTTCACGAGGTCACCAAAGTGGTCACACGTAACCTGAACAAGACCATCGAGATCAACT 775082 Query 105177 TTTACCCCGT-TGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATTGGTCTCGGT 105235 ||||| || ||| || || || || | | ||||| || |||||||| ||| Sbjct 775083 ACTACCCAGTACCAGA-GGCACGAAAGAGCAACTTCCGCCACCGACCCATTGGTCTTGGT 775141 Query 105236 GTTCAGGGTCTCGCGGATGTATTCATTCTTTGTCGCCACG-CATTTGATTCCGACGAAGC 105294 || | ||||| || |||| ||| || | || || | |||| || || || || Sbjct 775142 GTCAACGGTCTTGCTGATGCCTTC-TTGGCTCTCCGCATGCCATTCGACTCGCCTGAGGC 775200 Query 105295 GAAGGAAATCAATGCGCGCATATTTGAGACCATGTATCACGCCGCTCTTGAGGCGAGTTC 105354 ||||| | || | || ||||||||||| ||||| || ||||||||||| ||| Sbjct 775201 CAAGGAGCTTAACATCCAGATTTTTGAGACCATCTATCATGCTGCTCTTGAGGC---TTC 775257 Query 105355 A---GAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAGCTTCACA 105411 | ||| | || ||| ||||| || || || | || ||||||| || || Sbjct 775258 ATGCGAGCTTGCTGAGAAGCTCGGTCCTTACGAGACATACCCAGGCTCTCCAGTATCGCA 775317 Query 105412 AGGGGTGCTTCAATTTGATATGTGGG--AAG-GTGAGACCAAGCTTCACTACGACTGGGA 105468 || | ||| || | || ||||||| ||| | ||| | || || ||||||| Sbjct 775318 GGGCGAGCTCCAGTACGACATGTGGGGCAAGACTCCTACCGACCT---CTGGGACTGGGC 775374 Query 105469 AGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTCCTCATGGCTCCAAT 105528 || ||||||| ||| || | ||| | || ||| || ||| | || || || Sbjct 775375 CGCACTCAAGGGCAAGATCGCCCAGCACGGTGTGCGCAACTCGCTTCTCGTTGCGCCGAT 775434 Query 105529 GCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCCTACACGAC 105588 |||||||||||| ||| | || ||| |||| ||| || ||||| || || ||||| | Sbjct 775435 GCCAACAGCCTCGACCTCGCAGATCATGGGCTTTAACGAGTGCTTCGAGCCATACACAAG 775494 Query 105589 GAACATCTA 105597 ||||| || Sbjct 775495 CAACATTTA 775503 >seq11 Length=1109632 Score = 111 bits (122), Expect = 2e-19 Identities = 116/150 (77%), Gaps = 2/150 (1%) Strand=Plus/Plus Query 94807 CGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGC-GCTAT 94865 || ||| | |||||||| ||||||||||||||||||||||| | ||| ||| ||||| Sbjct 842665 CGTCTCATTGCATTTGCCGCCGTTGAGGGTATCTTCTTCTCTGGAT-CTTTTGCTGCTAT 842723 Query 94866 TTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTC 94925 | ||||| ||||| || ||||||||| | || ||| ||||| |||||||| ||||| Sbjct 842724 CTTCTGGCTGAAGAAACGTGGTCTCATGGCCGGGCTCACATTCTCGAACGAGCTCATCTC 842783 Query 94926 TCGTGACGAGGGACTCCACCAAGAGTTTGC 94955 ||||| ||||| | ||| ||| || || Sbjct 842784 CCGTGATGAGGGCATGCACACAGACTTCGC 842813 >seq57 Length=2428954 Score = 95.1 bits (104), Expect = 1e-14 Identities = 145/204 (71%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 169169 AGACCCTTGATGTGGGAACCGTCGTTATCGGCATCCGTCATGATCATGAGACGACCATAC 169228 |||||||||||||| || || |||| ||| ||| ||||||||||| ||| | ||||| Sbjct 640672 AGACCCTTGATGTGAGAGCCATCGTGATCCTGATCGGTCATGATCATCAGATGGCCATAA 640731 Query 169229 CG-AAGCTCGGAAACATCTTGATAGTCCTTACCCTGTTGAAGACCCAAGATCTTCTTGAG 169287 || |||| | | |||| |||||||| ||||| |||||||| | |||||||| Sbjct 640732 CGCAAGC-CTTTAGTATCTGTGTAGTCCTTCTTATGTTGCAGACCCAAAAACTTCTTGAT 640790 Query 169288 ATCGTTGAACTCTTGGTTTGATGTGAGCTGTGTGACAGAGGCATCGCGAACATTCTTACA 169347 || | | ||| ||| || | ||| || || |||||||| ||||| | Sbjct 640791 ATTCTGAATCTCGGCGTTCTTTGAAATCTGGTCGATGGAAGCATCGCGCACATTGAGAAT 640850 Query 169348 CTTCCCACGAAGAGGGAAGACACC 169371 ||| || ||||| ||||||||||| Sbjct 640851 CTTACCCCGAAGTGGGAAGACACC 640874 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583259757421320