Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236685.1_202017-07-
28] 143 sequences; 29,909,557 total letters
Query= NC_028093.1
Length=182309
Score E
Sequences producing significant alignments: (Bits) Value
seq50 293 3e-74
seq11 111 2e-19
seq57 95.1 1e-14
>seq50
Length=820670
Score = 293 bits (324), Expect = 3e-74
Identities = 912/1389 (66%), Gaps = 41/1389 (3%)
Strand=Plus/Plus
Query 104231 ATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGTCTTGGAGACA 104290
||| ||||||| ||||| |||| |||||||||||||||||||| | | | ||||||
Sbjct 774134 ATGATCATGCGTGTGGCTGTCGGCATTCATGGGGAAGACATTGAAGCAGCGATTGAGACA 774193
Query 104291 TACGACAAGATGTCCCA-AGGTATGTTCATTCACGCAACACCAACCCTCTTCAATGCTGG 104349
||| || | ||||| | ||| |||| || || | ||||| || |||| ||||||
Sbjct 774194 TACAACTACATGTCGTTGAAGTAC-TTCACACATGCTTCGCCAACACTTTTCAGTGCTGG 774252
Query 104350 TACACCA-AGACCC--CAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGACTCAAT 104406
||| ||| || | | | | ||| |||||| | | |||| ||||| ||| ||
Sbjct 774253 TACCCCACAGGCGCAGCTAGCATCC---TGCTTCTTGGTGGCCATGAAGGATGACAGCAT 774309
Query 104407 CAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGGGGGTAT 104466
| |||||||| | || || | | ||||| ||||| ||| ||||| |||||
Sbjct 774310 TGATGGTATCTACGATACCCTCAAGATATGTGCCATGATCTCCAAGAACGCTGGCGGTAT 774369
Query 104467 TGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTA--TTCGGGGGACAAATGGT 104524
||| | || | || | | || |||| | ||| || || | || ||||| ||
Sbjct 774370 TGGTCTTCATGTTCACAACATCAGGGCCAC--AGGCTCATACATTGGCGGCACAAACGGC 774427
Query 104525 CAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGTAAAT 104584
||| | ||| || | |||||||| || || | |||| ||| || || || || |
Sbjct 774428 ACATCCAACGGTCTTGTACCAATGCTACGAGTCTATAACAACACTGCTCGTTACGTTGAC 774487
Query 104585 CAAGCTGG------GCGTCGAAAGGGATCTATCGCAGTCTATCTTGAGCCATGGCACGCG 104638
|| | ||| ||||| | || || | || |||| |||||||| ||||| ||
Sbjct 774488 CAGGGTGGCAACAAGCGTCCA---GGTGCTTTTGCCATCTACCTTGAGCCGTGGCATGCA 774544
Query 104639 GATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCGCGGTGC-CG 104697
|| ||||| ||||| | || | || ||||| || | || || | || ||| ||
Sbjct 774545 GACGTCATGCAGTTCATGGACCTTCGCAAGAACCATGGAAAGGAAGAAGTTCG-TGCGCG 774603
Query 104698 CGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAGTGG 104757
|||| | |||| ||||||||||||||| |||||||| ||| || | || || ||| ||
Sbjct 774604 CGATTTGTTCTACGCTCTCTGGATTCCCGATCTCTTTATGCAGCGTGTCGAACAGAACGG 774663
Query 104758 CAATTGGTCTCTCTTTTGTCCAGAC-AAGGCACCTGGTCTCTCCGATGCCGTGGGTGAGG 104816
|| |||| |||| | || || || || || |||||||| || |||| ||||| |
Sbjct 774664 CACTTGGACTCTGATGTGCCCCAACGAATGC-CCTGGTCTGTCGGATGTTTACGGTGACG 774722
Query 104817 AGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGGTCGGGCGACTGCGACGGTGCCAG 104876
|||| | | || ||| || ||| |||||| || || |||||| | |
Sbjct 774723 AGTTCAAGGAGCTGTACGAGCGTTATGAGAGAGAAGGCAAGGGCCGTGAGACGGTTCGTG 774782
Query 104877 CTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATACATGC 104936
|| | | ||| | ||||||||| || | || |||||||| || ||||| | ||| |
Sbjct 774783 CTCAGAAAATATGGTATGCTATTCTCGAGGCGCAGACCGAGACCGGCACACCTTTCATTC 774842
Query 104937 TTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAGAGTT 104996
| ||||| |||||| |||| ||||| ||||| |||||| | || |||||||| |
Sbjct 774843 TGTACAAGGACGCCGCCAACCGCAAGAGCAATCAGAAGAATCTTGGCACCATCAAGAGCT 774902
Query 104997 CCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTGTAACC 105056
| ||| | || || || ||| |||| | | | ||||||| ||||| || || |
Sbjct 774903 CTAATTTGTGCACTGAGATCATGGAGTACTCTGCTCCAGATGAGGTCGCTGTCTGCAATC 774962
Query 105057 TCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGACATTTGATTATGAAA 105116
| || || | ||||| |||| || || || |||| || ||||| | | |
Sbjct 774963 TGGCTTCGCTTGCTCTGCCCACCTACGTCGACATCGAGAACGAGGTTTTTGACTTCAAGA 775022
Query 105117 AACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAACAGAGTTATTGATAGAAATT 105176
|||| ||||| || || ||| ||||| ||||| |||| || || | || |
Sbjct 775023 AACTTCACGAGGTCACCAAAGTGGTCACACGTAACCTGAACAAGACCATCGAGATCAACT 775082
Query 105177 TTTACCCCGT-TGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATTGGTCTCGGT 105235
||||| || ||| || || || || | | ||||| || |||||||| |||
Sbjct 775083 ACTACCCAGTACCAGA-GGCACGAAAGAGCAACTTCCGCCACCGACCCATTGGTCTTGGT 775141
Query 105236 GTTCAGGGTCTCGCGGATGTATTCATTCTTTGTCGCCACG-CATTTGATTCCGACGAAGC 105294
|| | ||||| || |||| ||| || | || || | |||| || || || ||
Sbjct 775142 GTCAACGGTCTTGCTGATGCCTTC-TTGGCTCTCCGCATGCCATTCGACTCGCCTGAGGC 775200
Query 105295 GAAGGAAATCAATGCGCGCATATTTGAGACCATGTATCACGCCGCTCTTGAGGCGAGTTC 105354
||||| | || | || ||||||||||| ||||| || ||||||||||| |||
Sbjct 775201 CAAGGAGCTTAACATCCAGATTTTTGAGACCATCTATCATGCTGCTCTTGAGGC---TTC 775257
Query 105355 A---GAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAGCTTCACA 105411
| ||| | || ||| ||||| || || || | || ||||||| || ||
Sbjct 775258 ATGCGAGCTTGCTGAGAAGCTCGGTCCTTACGAGACATACCCAGGCTCTCCAGTATCGCA 775317
Query 105412 AGGGGTGCTTCAATTTGATATGTGGG--AAG-GTGAGACCAAGCTTCACTACGACTGGGA 105468
|| | ||| || | || ||||||| ||| | ||| | || || |||||||
Sbjct 775318 GGGCGAGCTCCAGTACGACATGTGGGGCAAGACTCCTACCGACCT---CTGGGACTGGGC 775374
Query 105469 AGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTCCTCATGGCTCCAAT 105528
|| ||||||| ||| || | ||| | || ||| || ||| | || || ||
Sbjct 775375 CGCACTCAAGGGCAAGATCGCCCAGCACGGTGTGCGCAACTCGCTTCTCGTTGCGCCGAT 775434
Query 105529 GCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCCTACACGAC 105588
|||||||||||| ||| | || ||| |||| ||| || ||||| || || ||||| |
Sbjct 775435 GCCAACAGCCTCGACCTCGCAGATCATGGGCTTTAACGAGTGCTTCGAGCCATACACAAG 775494
Query 105589 GAACATCTA 105597
||||| ||
Sbjct 775495 CAACATTTA 775503
>seq11
Length=1109632
Score = 111 bits (122), Expect = 2e-19
Identities = 116/150 (77%), Gaps = 2/150 (1%)
Strand=Plus/Plus
Query 94807 CGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGC-GCTAT 94865
|| ||| | |||||||| ||||||||||||||||||||||| | ||| ||| |||||
Sbjct 842665 CGTCTCATTGCATTTGCCGCCGTTGAGGGTATCTTCTTCTCTGGAT-CTTTTGCTGCTAT 842723
Query 94866 TTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTC 94925
| ||||| ||||| || ||||||||| | || ||| ||||| |||||||| |||||
Sbjct 842724 CTTCTGGCTGAAGAAACGTGGTCTCATGGCCGGGCTCACATTCTCGAACGAGCTCATCTC 842783
Query 94926 TCGTGACGAGGGACTCCACCAAGAGTTTGC 94955
||||| ||||| | ||| ||| || ||
Sbjct 842784 CCGTGATGAGGGCATGCACACAGACTTCGC 842813
>seq57
Length=2428954
Score = 95.1 bits (104), Expect = 1e-14
Identities = 145/204 (71%), Gaps = 2/204 (1%)
Strand=Plus/Plus
Query 169169 AGACCCTTGATGTGGGAACCGTCGTTATCGGCATCCGTCATGATCATGAGACGACCATAC 169228
|||||||||||||| || || |||| ||| ||| ||||||||||| ||| | |||||
Sbjct 640672 AGACCCTTGATGTGAGAGCCATCGTGATCCTGATCGGTCATGATCATCAGATGGCCATAA 640731
Query 169229 CG-AAGCTCGGAAACATCTTGATAGTCCTTACCCTGTTGAAGACCCAAGATCTTCTTGAG 169287
|| |||| | | |||| |||||||| ||||| |||||||| | ||||||||
Sbjct 640732 CGCAAGC-CTTTAGTATCTGTGTAGTCCTTCTTATGTTGCAGACCCAAAAACTTCTTGAT 640790
Query 169288 ATCGTTGAACTCTTGGTTTGATGTGAGCTGTGTGACAGAGGCATCGCGAACATTCTTACA 169347
|| | | ||| ||| || | ||| || || |||||||| ||||| |
Sbjct 640791 ATTCTGAATCTCGGCGTTCTTTGAAATCTGGTCGATGGAAGCATCGCGCACATTGAGAAT 640850
Query 169348 CTTCCCACGAAGAGGGAAGACACC 169371
||| || ||||| |||||||||||
Sbjct 640851 CTTACCCCGAAGTGGGAAGACACC 640874
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 583259757421320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |