Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236725.1_202017-07-
28] 605 sequences; 31,102,602 total letters
Query= NC_003102.1
Length=139342
Score E
Sequences producing significant alignments: (Bits) Value
seq465 435 3e-117
seq111 185 8e-42
seq122 111 1e-19
seq594 86.0 6e-12
>seq465
Length=198195
Score = 435 bits (482), Expect = 3e-117
Identities = 1034/1547 (67%), Gaps = 40/1547 (3%)
Strand=Plus/Plus
Query 22452 GGTTCACCACTTGAAACTCGCCGGACAAGACGCGGCGTTGGTAAATGTTGGATGTGAACG 22511
|||| || || || |||||||| | ||| || || || |||||||||| |||| | |
Sbjct 129017 GGTTGACGACCTGGAACTCGCCAGCCAACACACGACGAGAGTAAATGTTGCTTGTGTATG 129076
Query 22512 GTTCGAAAGATTCATTGTTTCCCAGTATCTGAGCGGTCGAAGCGGTCGGCATCGGCGCCA 22571
| ||||| | || || |||| ||||| | |||||| || || ||||||||||| |
Sbjct 129077 GCTCGAAGCACTCGTTAAAGCCCATGATCTGCGAGGTCGAGGCTGTTGGCATCGGCGCAA 129136
Query 22572 ACAGTAGCGAGTTTCTCAAGCCGTGCTTTGAAATTTTACTCTTGAGCATCGACCAGTCCC 22631
|| |||||||| | || ||||||| | || || | |||||| | ||||||||
Sbjct 129137 CGAGAAGCGAGTTGCGCACACCGTGCTGGGCGATCTTGCCCTTGAGTGCGGCCCAGTCCC 129196
Query 22632 ACAGATCGGACGGCGTCACATTGTCCCACATATCGTATTGCAACACGCC--GCGACTCGC 22689
| || |||| || ||| ||| ||||||| ||||| || | | |||| |||| |
Sbjct 129197 AGAGGTCGGTAGGAGTC---TTGCCCCACATGTCGTACTGGAGCTCGCCCTGCGATACT- 129252
Query 22690 CGGGCTGCCTTCGTACGTTTCGTACGGACCATATATCGCGGCAAGTTCGCAGCTCGCCTC 22749
|| |||| ||| || ||||| ||||| || | ||||| ||||| |||||
Sbjct 129253 -GGAGAGCCTGGGTATGTCTCGTAAGGACCGAGCTTCTCAGCAAGCTCGCATGAAGCCTC 129311
Query 22750 CAACGCGCCGTAATATATAGTCTCGAAGATTTTCTTGTTCAATTCGGCGGC----GGCGA 22805
| || | | ||| || ||||| || || | | || | || ||| |||||
Sbjct 129312 AAGAGCAGCATGATAGATGGTCTCAAAAATCTGGATATTAAGCTCCTTGGCCTCAGGCGA 129371
Query 22806 CGCTTTCGTACGGCATACGCATCATCACGAACGCGTCCGCCATACCCTGAACGCCTATAC 22865
||| | ||||| || | || ||| || || || | ||| | || || | ||
Sbjct 129372 G----TCGAATGGCATGCGGAGAGCCAAGAAGGCATCAGCAAGACCGTTGACACCAAGAC 129427
Query 22866 CGATCGGTCGGTTTTTCAGATTCGACACTTT--TGCCTCGGGCAAAGGATACCAATTCGA 22923
| || ||||||| | || | |||| |||||| || | || || | ||
Sbjct 129428 CAATGGGTCGGTGGCGGAAGTTG--CTCTTTCGTGCCTCTGGTACTGGGTAGTAGTTGAT 129485
Query 22924 ATCGATTGTTCTGTTCAAGTTTCTGGTCACAATTTTCGTTATNNNNNNNNNNNNNTCAAA 22983
||||| || |||||| ||| | || || | ||| || | | ||
Sbjct 129486 CTCGATGGTCTTGTTCAGGTTACGTGTGACCACTTTGGTGACCTCGTGAAGTTTCTTGAA 129545
Query 22984 GTCGTAAACGCC-----CGATTGTACAACAAACTTGTTGACGGCGATCGAGGCAAGATTG 23038
||| |||| | |||| || | || | || | || | ||| || ||||||
Sbjct 129546 GTCAAAAACCTCGTTCTCGAT-GT-CGACGTAGGTGGGCAGAGCAAGCGAAGCCAGATTG 129603
Query 23039 CATACGGCCACCTCGTCTTTGGACGTGTACTCTACAATTTCGGTACATAGATTGCTACAC 23098
|| || || ||||| ||| | | |||||| | || || || || | ||| | |
Sbjct 129604 CAGACAGCGACCTCATCTGGAGCAGAGTACTCCATGATCTCAGTGCACAAATTAGAGCTC 129663
Query 23099 TTTATCGTGCCCAAATTGCTCTGGTTGCTTTTTCGATTGCACGAATCCTTGTAGAGCATG 23158
|| || ||||| | ||| |||| ||||| || || ||| | |||||||| || |||
Sbjct 129664 TTGATGGTGCCAAGATTCTTCTGATTGCTCTTGCGGTTGGCGGCGTCCTTGTACAGAATG 129723
Query 23159 TACGGCGTGCCCGTCTCGACCTGCGACTCGATGATCGCTCGCCACATAGTCTGAGCGTGA 23218
| || ||||| |||||| ||||| ||||| || || ||| || ||||||| ||
Sbjct 129724 AAAGGTGTGCCGGTCTCGGTCTGCGCCTCGAGAATAGCATACCATATTTTCTGAGCACGA 129783
Query 23219 ACACGTCGCACGTACCT-GCCTTCTTCCTCGTACTTTTGGTACAACGCGTCAAATTCGGC 23277
|| |||| |||| ||| ||||||| ||| || | ||||| | | | || ||| |
Sbjct 129784 AC-CGTCTCACGGCCCTTGCCTTCTCTCTCATAACGCTCGTACAGCTCCTTGAACTCGTC 129842
Query 23278 ACCGTAACAGTCGGCCAGGCCGGGCGATTGCATCGGACACATGAGACTCCACATTGAGTC 23337
||||||| || | ||| || || ||| | || ||||| ||| |||| | ||
Sbjct 129843 ACCGTAAACATCCGACAGACCAGGGCATTCGTTGGGGCACATCAGAGTCCAAGTGCCGTT 129902
Query 23338 ATTTTCAACGCGTCTCATAAAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGC 23397
| ||| || || |||||| ||||| || ||||| ||||||||||||| ||||| ||
Sbjct 129903 CTGTTCGACACGCTGCATAAAGAGATCGGGAATCCAGAGAGCGTAGAACAAATCGCGCGC 129962
Query 23398 GCGCACCTCCTCTTTGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATG 23457
|| || || || || || |||||| | |||| || | || ||||| |||||
Sbjct 129963 ACGAACTTCTTCCTTTCCATGGTTCTTGCGAAGGTCCATGAACTGCATGACGTCTGCATG 130022
Query 23458 CCACGGCTCGAGGTAAACGGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTA 23517
||||||||| ||||| | |||||| || || || | ||| ||||| ||||| || |||||
Sbjct 130023 CCACGGCTCAAGGTAGATGGCAAAAGCACCTGGACGCTTGTTGCCACCCTGGTCAACGTA 130082
Query 23518 ACGGGCCGTGTTGTTGTACACTCTTAGCATCGGCACGAGACCGTTGGACGCGCCGCCTAC 23577
||| || |||||||| || |||| |||||| || || ||||||||||| | |||| |
Sbjct 130083 ACGAGCAGTGTTGTTATAGACTCGTAGCATTGGTACAAGACCGTTGGATGTGCCGTTTGT 130142
Query 23578 GCCCGCCACACT-CGAACCTTTTGCTCGAACGTTGTGAACGTGGAAACCTATGCCTCCGC 23636
| |||||| | || ||| | || | | ||||||||| || | ||| || || ||
Sbjct 130143 G-CCGCCAATGTATGAGCCTGTGGCCCTGATGTTGTGAACATGAAGACCAATACCGCCAG 130201
Query 23637 CCGATTTCGATATCATCGCGCATTGTTTCAGAGTGTCGTAGATGCCCTCGATGCTGTCCT 23696
| || || ||||| || ||| || || || |||||||| || || |||||||| |
Sbjct 130202 CGTTCTTGGAGATCATGGCACATATCTTGAGGGTATCGTAGATACCATCAATGCTGTCAT 130261
Query 23697 CTTTGGTCGCGACCAAGAAACACGAAGACATTTGCGCTTTGGGCGTAGCGGCCGAGAACA 23756
| || | || |||||||| || || | | ||||| | || ||| | || ||| |
Sbjct 130262 CCTTCATGGCCACCAAGAAGCAGGATGCTAGCTGCGCCTGTGGGGTACCAGCACTGAAAA 130321
Query 23757 GTGTCGGGCTGGCGTGCGTAAAGTA-TCCATTCGACAT-TAGATTGTACGTGTCGATGGC 23814
|||| || || || || ||||| | || |||||| ||| ||||| || || || ||
Sbjct 130322 GTGTTGGCGAAGCATGTGTGAAGTACTTCA-ACGACATGTAG-TTGTATGTCTCAATCGC 130379
Query 23815 GGCATCAATGTCCTCTCCGTGTATACCGATGGCGACGCGCATCATCATGTATTGAGGTCT 23874
|| |||||||| || || || || |||| || || ||||| ||||| | ||| |||||
Sbjct 130380 TGCTTCAATGTCTTCCCCATGAATGCCGACAGCCACACGCATGATCATCTGTTGCGGTCT 130439
Query 23875 CTCG---ACCGTGACGCCGTTAATTTTGAACAGATATGAACGTTGCATCGTTTTAAATCC 23931
|||| ||| | ||||| |||| ||| || ||||| || | || || || || ||
Sbjct 130440 CTCGGCAACCTT---GCCGTCAATTCTGAGAAGGTATGATCGCTCCAGAGTCTTGAAGCC 130496
Query 23932 AAAATAGTCATAGTTAAAGTCACGATCGTGCACTATGGCCGAATTCA 23978
|| || | ||||| ||||| || || | || |||||||| ||||
Sbjct 130497 GAAGTACTGGTAGTTGAAGTCGCGGTCATAGACAATGGCCGAGTTCA 130543
>seq111
Length=903404
Score = 185 bits (204), Expect = 8e-42
Identities = 561/858 (65%), Gaps = 23/858 (3%)
Strand=Plus/Plus
Query 57570 ATTTGGAACATGTACAAAAAGGCAGAAGCATCGTTTTGGACCGTCGAAGAAGTAGACCTG 57629
|| ||| | |||||||||||||| || || || || ||||| | || || | || |||
Sbjct 723393 ATATGGCAAATGTACAAAAAGGCCGAGGCCTCATTCTGGACAGCTGAGGAGATTGATCTG 723452
Query 57630 TCTAAGGATCTGAGCGATTGGGATTCCC---TCAAAGAATCTGAGAGAAATTTTATTAAA 57686
|| |||||||| ||| ||| | | |||| || || || || || |
Sbjct 723453 TCGAAGGATCTCCACGACTGGAACAAGCGACTCAACGACGACGAACGATTCTTCATCTCA 723512
Query 57687 CACGTGTTGGCGTTTTTCGCCGCATCCGATGGTATTGTTAACGAGAATTTGGTCGAAAGA 57746
||||| | || || ||||||||||||||||| ||||| |||||||| | ||||| |
Sbjct 723513 CACGTCCTCGCATTCTTCGCCGCATCCGATGGCATTGTCAACGAGAACCTCGTCGAGCGC 723572
Query 57747 TTTTCACAAGAAGTGCAAGTGACGGAGGCGAGATGCTTTTACGGATTTCAAGTGGCCATT 57806
|| || ||||| | ||||||| ||||||| ||||| || || | ||
Sbjct 723573 TTCAGCTCTGAGGTGCAGATCCCGGAGGCACGATGCTTCTACGGCTTCCAGATCATGATG 723632
Query 57807 GAAAACGTGCATTCAGAAATGTATTCGCTACTCATCGATACGTACGTGAAGGA--CAACG 57864
|| ||| | || || || | ||||| || ||||||||||| ||| | | || ||| |
Sbjct 723633 GAGAACATCCACTCCGAGACATATTCCCTTCTCATCGATACATACATCAGCGAGCCAAAG 723692
Query 57865 ACGAGAAACGTAGACTGTTCAACGCGATCGAAACAATGCCCGCGATCGCCAAGAAGGCAG 57924
| ||| | || |||||||| || ||||| | || || ||| || |||||| |
Sbjct 723693 CAGCGAA-CATAC-CTGTTCAATGCCATCGACAACATCCCATGCATCCGCAGGAAGGCTG 723750
Query 57925 AGTGGTCAATCAAATGGATA----AAAAGCGCCACGGCCACGTTCGCCGAGAGGCTAATC 57980
| ||| | | |||||| | ||| | | || |||||| | || ||
Sbjct 723751 ACTGGGCGTTGCGATGGATTTCTGACAAGAACT----CGACATTCGCCCTCCGTCTCATT 723806
Query 57981 GCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTTTGCGGCAATATTTTGGATG 58040
|| || |||||||| || ||||| ||||| || || ||||| || || || ||| ||
Sbjct 723807 GCATTTGCCGCCGTTGAGGGTATCTTCTTCTCTGGATCTTTTGCTGCTATCTTCTGGCTG 723866
Query 58041 AAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTGATATCGCGCGACGAG 58100
|||||||| || || ||| |||| || || || |||||| | || || || || |||
Sbjct 723867 AAGAAACGTGGTCTCATGGCCGGGCTCACATTCTCGAACGAGCTCATCTCCCGTGATGAG 723926
Query 58101 GGTCTCCATACTGATTTTGCGTGCCTAATGTACTCTCACATTGTCAATAAACCGACGCGG 58160
|| | || || || || || ||||| ||| ||| || | || || |||| | |
Sbjct 723927 GGCATGCACACAGACTTCGCCTGCCTTCTGTTCTCGCATCTGAAGAACAAGCCGAACCAG 723986
Query 58161 GATCGCATCTTGGACATTATCACCGAGGCGGTCGCGATCGAAAATGAGTTTGTCACCGAA 58220
| | | | ||| ||||||||||| ||| ||||||| | ||||| | || ||
Sbjct 723987 GCCCTTGTGCAGAGCATCATCACCGAGGCCGTCACGATCGAGCAGGAGTTCTTGACAGAC 724046
Query 58221 GCCCTACC--GGTGGCCATGCTCGGTATGAACAATGATTTGATGTCAAAGTACATTGAGT 58278
|| || || | || | || || |||||| || | |||||| | |||||||| |
Sbjct 724047 GCTCTTCCATGCAAGC--TTCTGGGGATGAACGCTGGCCTCATGTCACAATACATTGAAT 724104
Query 58279 TTGTTGCCGACAGACTTTTGCTCGAACT--GATTGGAGAGCGTCATTACAACACGAAAAA 58336
| || ||||| | || || | | ||| | ||| || |||||| | | ||
Sbjct 724105 TCGTCGCCGATCGCCTACTGTTAGCACTCGGCAACAAGAAGTTC--TACAACGCCACCAA 724162
Query 58337 TCCGTTTGATTTTATGAATCTGATCTCGCTCGAGGGCAAGACAAACTTTTTCGaaaaaaa 58396
|| || || || ||| | || ||||| | |||||||| ||||| ||||| ||
Sbjct 724163 CCCCTTCGACTTCATGGAGAACATTTCGCTGGGCGGCAAGACCAACTTCTTCGAGAAGCG 724222
Query 58397 aGTTAGCGAATATCAAAA 58414
||| |||| || || ||
Sbjct 724223 TGTTGGCGAGTACCAGAA 724240
>seq122
Length=383522
Score = 111 bits (122), Expect = 1e-19
Identities = 162/229 (71%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
||||| || ||||| |||||||| || ||||| || |||||| |||| || || | |
Sbjct 337383 ATGCAGATCTTCGTCAAGACTCTCACCGGCAAGACCATCACCCTCGAGGTCGAGTCCAGC 337442
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|||| |||| | ||||| || || ||||||||| || | || || ||||||
Sbjct 337443 GACACCATCGACAATGTCAAGTCGAAGATCCAGGACAAGGAGGGTATCCCACCTGACCAG 337502
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372
||||| || || || || ||||| ||| | || || | ||| || ||| || |||
Sbjct 337503 CAGCGCCTGATTTTTGCAGGCAAGCAGCTCGAGGATGGTCGTACTCTGTCCGACTACAAC 337562
Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421
|| || |||||||||||||| || |||| ||| | || | || ||||
Sbjct 337563 ATCCAGAAAGAATCGACTCTCCACTTGGTGCTTCGTCTCCGTGGTGGTA 337611
Score = 111 bits (122), Expect = 1e-19
Identities = 154/213 (72%), Gaps = 2/213 (1%)
Strand=Plus/Plus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
|||||||||||||| ||||| || || ||||| || ||||| |||| || ||| | |||
Sbjct 337611 ATGCAAATTTTCGTCAAGACACTCACCGGCAAGACCATCACACTCGAAGTGGAATCATCC 337670
Query 31253 GACAGTGTCGAAACGGTCAA-ACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311
|||| |||| | ||||| || || || |||||||| ||| | || || |||||
Sbjct 337671 GACACGATCGACAACGTCAAGTCAAAG-ATCCAAGACAAGGAGGGCATCCCACCGGACCA 337729
Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371
||||||||| || ||||| ||||| ||| | || ||| ||| | ||||| ||
Sbjct 337730 GCAGCGTCTCATCTTCGCCGGCAAGCAGCTTGAGGACGGCCGGACACTTTCGGATTACAA 337789
Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404
||| || || || || ||||| || |||| ||
Sbjct 337790 CATCCAGAAGGAGTCCACTCTGCACTTGGTGCT 337822
>seq594
Length=758675
Score = 86.0 bits (94), Expect = 6e-12
Identities = 110/149 (74%), Gaps = 6/149 (4%)
Strand=Plus/Plus
Query 31202 TTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCCGACAGTGTC 31261
||||||||||| || || ||||| || ||||| |||| || || || ||||| ||
Sbjct 249934 TTCGTAAAGACCCTCACTGGCAAGACCATCACGCTCGAGGTCGAGTCGAGCGACACCATC 249993
Query 31262 GAAACGGTCAAACAGAG-AATAGC--GGACAAGGAAGGCGTGCCGCCCGACCAGCAGCGT 31318
|| | |||| |||| || | | ||||||||| || | || || ||||||||||||
Sbjct 249994 GACAATGTCA---AGAGCAAGATCCAGGACAAGGAGGGAATCCCACCGGACCAGCAGCGT 250050
Query 31319 CTAATATTCGCTGGCAAACAGTTGGAAGA 31347
| || |||||||| || |||||||| ||
Sbjct 250051 TTGATCTTCGCTGGAAAGCAGTTGGAGGA 250079
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 445763028891600
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