Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236725.1_202017-07-
28] 605 sequences; 31,102,602 total letters
Query= NC_004156.2
Length=231621
Score E
Sequences producing significant alignments: (Bits) Value
seq111 232 1e-55
seq465 165 1e-35
>seq111
Length=903404
Score = 232 bits (256), Expect = 1e-55
Identities = 579/864 (67%), Gaps = 33/864 (4%)
Strand=Plus/Plus
Query 125019 ATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTG 125078
|| ||| |||||||||||||||| ||||||| || ||||| | || ||| | ||||||
Sbjct 723393 ATATGGCAAATGTACAAAAAGGCCGAGGCCTCATTCTGGACAGCTGAGGAGATTGATCTG 723452
Query 125079 TCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAGAGTTTATATCG 125138
|| ||||| || |||| ||| | | || | | || || ||| || || ||
Sbjct 723453 TCGAAGGATCTCCACGACTGGAACAAGCGACTCAACGACGACGAACGATTCTTCATCTCA 723512
Query 125139 CACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCT-GTTGACACG 125197
||| | | || ||||| |||| |||||||| || |||||||| || || || || ||
Sbjct 723513 CACGTCCTCGCATTCTTCGCCGCATCCGATGGCATTGTCAACGAGAACCTCGTCGA-GCG 723571
Query 125198 ATTC-TCTCAAGAGTTGACCATTCCAGAGGTGTCGTGCTTTTACGGATTCCAAATCATGA 125256
||| ||| ||| || || || |||| ||||| ||||| ||||| |||||||
Sbjct 723572 CTTCAGCTC-TGAGGTGCAGATCCCGGAGGCACGATGCTTCTACGGCTTCCAGATCATGA 723630
Query 125257 TTGAGAACGTGCACTCGGAAATGTACTCTACACTGATTGACATGTACATTCGCGATCC-- 125314
| |||||| | ||||| || | || || || || || | ||||| |||| ||
Sbjct 723631 TGGAGAACATCCACTCCGAGACATATTCCCTTCTCATCGATACATACATCAGCGAGCCAA 723690
Query 125315 -GCAACGTAAACACATGCTCTTTAACGCAATCGACACGGTGCCGTCTATACGTAAAAAGG 125373
||| || |||| | || || || || ||||||| | || | || || | ||||
Sbjct 723691 AGCAGCG--AACATA-CCTGTTCAATGCCATCGACAACATCCCATGCATCCGCAGGAAGG 723747
Query 125374 CTCAATGGGTGATTCGGTGGATCGATGACGACAAGTCTTCGTACGCCGACAGACTGGTGG 125433
|| | |||| | | || ||||| |||| | || || | | |||| | | || | |
Sbjct 723748 CTGACTGGGCGTTGCGATGGATTTCTGACAAGAACTCGACATTCGCCCTCCGTCTCATTG 723807
Query 125434 CATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTTTGGCTCA 125493
|||| |||||||| ||||| |||||||| || || |||||| || ||||| ||||| |
Sbjct 723808 CATTTGCCGCCGTTGAGGGTATCTTCTTCTCTGGATCTTTTGCTGCTATCTTCTGGCTGA 723867
Query 125494 AGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGAGACGAGG 125553
|||| || || |||||| |||| || || | |||||| | || || || || ||||
Sbjct 723868 AGAAACGTGGTCTCATGGCCGGGCTCACATTCTCGAACGAGCTCATCTCCCGTGATGAGG 723927
Query 125554 GCCTACACTGTGACTTTGCCATTCTACTGTT-TCGCAACTATCTGCGTCCCGAGTGCAGA 125612
|| | ||| ||||| ||| || ||||| |||| ||||| | | || ||
Sbjct 723928 GCATGCACACAGACTTCGCCTGCCTTCTGTTCTCGC----ATCTGAAGAACAA--GCCGA 723981
Query 125613 TCCAG--CGATGAAAAGGTCATCAACATTGTAACCGATGCCGTGAGGATAGAACAAGAGT 125670
|||| | || || ||||| | ||||| ||||| | ||| || || ||||
Sbjct 723982 ACCAGGCCCTTGTGCAGAGCATCA------TCACCGAGGCCGTCACGATCGAGCAGGAGT 724035
Query 125671 TTCTAACCGAATCCCTACCGGTCAGCATGATTGGCATGAACTGCAAG-CTAATGTGCGAG 125729
| | || || | || || || | | || |||||| || | || |||| |
Sbjct 724036 TCTTGACAGACGCTCTTCCATGCAAGCTTCTGGGGATGAAC-GCTGGCCTCATGTCACAA 724094
Query 125730 TACATAGAGTTTGTGGCAGATCGTCTACTGTACGAGTTGATTGGCCGCAAGA---TTTAC 125786
||||| || || || || ||||| ||||||| | | ||| ||||| | |||
Sbjct 724095 TACATTGAATTCGTCGCCGATCGCCTACTGTTAG---CACTCGGCAACAAGAAGTTCTAC 724151
Query 125787 AACGCCAAGAATCCCTTTGATTTCATGACCAGCATATCACTAGAGGGTAAGACCAACTTT 125846
||||||| || ||||| || |||||| | ||| || || | || |||||||||||
Sbjct 724152 AACGCCACCAACCCCTTCGACTTCATGGAGAACATTTCGCTGGGCGGCAAGACCAACTTC 724211
Query 125847 TTCGAGAAGAAGGTCAGCGAGTAC 125870
||||||||| || ||||||||
Sbjct 724212 TTCGAGAAGCGTGTTGGCGAGTAC 724235
>seq465
Length=198195
Score = 165 bits (182), Expect = 1e-35
Identities = 382/568 (67%), Gaps = 6/568 (1%)
Strand=Plus/Minus
Query 96807 ACAAACGGCAACGCCAGTGGCCTAGTGCCAATGCTCAGAATGTACAATG-CAATGTCACG 96865
|||||||||| ||| || || || |||||||| || | || || || || | ||
Sbjct 130142 ACAAACGGCACATCCAACGGTCTTGTACCAATGCTACGAGTCTATAACAACACTG-CTCG 130084
Query 96866 ATACGTTACACAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTTG 96925
|||||| ||||| ||||| || || ||||| ||| | ||| ||||| | || || ||
Sbjct 130083 TTACGTTGACCAGGGTGGCAACAAGCGTCCAGGTGCTTTTGCCATCTACCTTGAGCCGTG 130024
Query 96926 GCACGCGGACGTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCACG 96985
||| || ||||| | | || || || | ||||| ||| ||| ||||| | ||
Sbjct 130023 GCATGCAGACGTCATGCAGTTCATGGACCTTCGCAAGAACCATGGAAAGGAAGAAGTTCG 129964
Query 96986 AGCCAGGGACTTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGTCAACGA 97045
|| | || ||||| || || |||||| | || ||| | || ||| |||| ||| | |
Sbjct 129963 TGCGCGCGATTTGTTCTACGCTCTCTGGATTCCCGATCTCTTTATGCAGCGTGTCGAACA 129904
Query 97046 CGGTGGCTACTGGAGCCTAATGTGCCCCGACTCGTCACCCGGTCTGTCCGATTGCTGGGG 97105
||| |||| || ||||||||| || | || |||||||| ||| | ||
Sbjct 129903 GAACGGCACTTGGACTCTGATGTGCCCCAACGAATGCCCTGGTCTGTCGGATGTTTACGG 129844
Query 97106 CGAAGAGTTTGAGGCCAAGTACACGGCCTACGAGCAAGAGGGCC-GATACGTGAGACGAG 97164
|| ||||| ||| |||| | || ||| ||| ||| | |||||||||
Sbjct 129843 TGACGAGTTCAAGGAGCTGTACGAGCGTTATGAGAGAGAAGGCAAGGGCCGTGAGACGGT 129784
Query 97165 TCGATGCACGAGAACTGTGGAAGGCCATCGTGACGGCTCAGGTAGAGACTGGAACTCCGT 97224
||| ||| | || | ||| | || || | ||| ||| ||||| || || || |
Sbjct 129783 TCG-TGCTCAGAAAATATGGTATGCTATTCTCGAGGCGCAGACCGAGACCGGCACACCTT 129725
Query 97225 ACATTCTCTACAAGGATACCGTGAATCGCAACAGCAACCA-ACGCCACTTGGGCACCATC 97283
|||||| |||||||| ||| || ||||| ||||| || | | ||||| |||||||
Sbjct 129724 TCATTCTGTACAAGGACGCCGCCAACCGCAAGAGCAATCAGAAGAATCTTGG-CACCATC 129666
Query 97284 AAGGGCTCCAATCTGTGCACGGAAATTGTAGAGTACGCCTCTCCGGACGAGACGGCAGTT 97343
||| |||| ||| ||||||| || || | |||||| | |||| || ||| || ||
Sbjct 129665 AAGAGCTCTAATTTGTGCACTGAGATCATGGAGTACTCTGCTCCAGATGAGGTCGCTGTC 129606
Query 97344 TGCGTTCTGGCATCGGTCAATCTGCCCA 97371
||| |||||| ||| | ||||||||
Sbjct 129605 TGCAATCTGGCTTCGCTTGCTCTGCCCA 129578
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 741053595739800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |