Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236725.1_202017-07-
28] 605 sequences; 31,102,602 total letters
Query= NC_009898.1
Length=368683
Score E
Sequences producing significant alignments: (Bits) Value
seq122 140 8e-28
seq594 129 1e-24
seq111 87.8 4e-12
>seq122
Length=383522
Score = 140 bits (154), Expect = 8e-28
Identities = 167/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
||||| ||||| | ||| || | || | || |||||| ||||| || |||||||
Sbjct 337609 CCACCACGGAGACGAAGCACCAAGTGGAGAGTCGATTCTTTCTGGATGTTGTAGTCGGAC 337550
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
|| || || || || || | || || ||||| || ||||| ||||| || | ||||
Sbjct 337549 AGAGTACGACCATCCTCGAGCTGCTTGCCTGCAAAAATCAGGCGCTGCTGGTCAGGTGGG 337490
Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426
|| || || || |||||||| |||| || || || || || | ||||| || || ||
Sbjct 337489 ATACCCTCCTTGTCCTGGATCTTCGACTTGACATTGTCGATGGTGTCGCTGGACTCGACC 337430
Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
||||| ||||| ||||| ||||| |||||||||||||| ||||||||
Sbjct 337429 TCGAGGGTGATGGTCTTGCCGGTGAGAGTCTTGACGAAGATCTGCAT 337383
Score = 111 bits (122), Expect = 4e-19
Identities = 139/191 (73%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342
|| || ||||| || || || | || || || ||||| || | || || || ||||||
Sbjct 337801 TCCTTCTGGATGTTGTAATCCGAAAGTGTCCGGCCGTCCTCAAGCTGCTTGCCGGCGAAG 337742
Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402
|| |||||||| || |||||| || || || || ||||| || | || |||||
Sbjct 337741 ATGAGACGCTGCTGGTCCGGTGGGATGCCCTCCTTGTCTTGGATCTTTGACTTGACGTTG 337682
Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462
|| || | ||| ||||| |||||||| ||||| ||||| ||||| || |||||||||
Sbjct 337681 TCGATCGTGTCGGATGATTCCACTTCGAGTGTGATGGTCTTGCCGGTGAGTGTCTTGACG 337622
Query 288463 AATATCTGCAT 288473
|| || |||||
Sbjct 337621 AAAATTTGCAT 337611
Score = 109 bits (120), Expect = 1e-18
Identities = 148/204 (73%), Gaps = 2/204 (1%)
Strand=Plus/Minus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
||||| || || | || |||||||| | ||||| || || || || || |||||||
Sbjct 337381 CCACCACGAAGACGGAGGACGAGATGGAGAGTGCTCTCCTTCTGAATGTTGTAGTCGGAC 337322
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
|| ||||| ||||| || | || || |||||||| |||| || || || | |||
Sbjct 337321 AGGGTGCGACCGTCCTCGAGCTGCTTGCCTGCGAAAATCAAGCGTTGCTGGTCAGGTGGA 337262
Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCT-TTCACGTTTTCTATAGAATCGCTCGATTCTAC 288425
|| ||||| ||||||||||| || ||| ||||| || || || | ||| ||| || ||
Sbjct 337261 ATGCCTTCCTTATCCTGGATCTT-GCTCTTCACATTGTCGATGGTGTCGGACGACTCAAC 337203
Query 288426 TTCGAGCGTGATCGTCTTCCCGGT 288449
||||| || || ||||| |||||
Sbjct 337202 CTCGAGGGTAATGGTCTTGCCGGT 337179
>seq594
Length=758675
Score = 129 bits (142), Expect = 1e-24
Identities = 138/180 (77%), Gaps = 2/180 (1%)
Strand=Plus/Minus
Query 288286 TTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATC 288345
|| ||||| || ||||||| ||| ||||| || || || || || ||||| |||||||||
Sbjct 250112 TTCTGGATGTTGTAGTCGGAGAGGGTGCGACCATCCTCCAACTGCTTTCCAGCGAAGATC 250053
Query 288346 AGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCT-TTCACGTTTTC 288404
| |||||| || ||||||||| || || |||||||| || ||| || || || ||
Sbjct 250052 AAACGCTGCTGGTCCGGTGGGATTCCCTCCTTGTCCTGGATCTT-GCTCTTGACATTGTC 249994
Query 288405 TATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAA 288464
|| | |||||||| || || ||||||||||| ||||| || || || ||||| |||||
Sbjct 249993 GATGGTGTCGCTCGACTCGACCTCGAGCGTGATGGTCTTGCCAGTGAGGGTCTTTACGAA 249934
>seq111
Length=903404
Score = 87.8 bits (96), Expect = 4e-12
Identities = 131/186 (70%), Gaps = 0/186 (0%)
Strand=Plus/Plus
Query 269155 GGTATGAATGCCGATCTCATGAATCAATATATCGAATTCGTGGCTGATCGTATCTTCACG 269214
|| ||||| || | |||||| ||||| || |||||||| || ||||| | |
Sbjct 724068 GGGATGAACGCTGGCCTCATGTCACAATACATTGAATTCGTCGCCGATCGCCTACTGTTA 724127
Query 269215 GCACTCGGTTATGAGAAAGTGTACAATTCGAAGAATCCCTTCGCCTTTATGGAACTAATT 269274
|||||||| | |||| | ||||| | | || ||||||| ||| ||||| |||
Sbjct 724128 GCACTCGGCAACAAGAAGTTCTACAACGCCACCAACCCCTTCGACTTCATGGAGAACATT 724187
Query 269275 TCGCTCGAAGGAAAGACGAACTTCTTCGAAAAGCGTGTCAGCGACTATCAACGTCCTGGT 269334
||||| | || ||||| ||||||||||| |||||||| |||| || || |||||
Sbjct 724188 TCGCTGGGCGGCAAGACCAACTTCTTCGAGAAGCGTGTTGGCGAGTACCAGAAGGCTGGT 724247
Query 269335 GTAATG 269340
|| |||
Sbjct 724248 GTCATG 724253
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1179645255835190
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |