Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236725.1_202017-07- 28] 605 sequences; 31,102,602 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq111 268 1e-66 seq605 123 3e-23 seq265 109 7e-19 >seq111 Length=903404 Score = 268 bits (296), Expect = 1e-66 Identities = 484/702 (69%), Gaps = 8/702 (1%) Strand=Plus/Plus Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 ||||| || |||||||||||||| || || || || || | ||||| || || ||||| Sbjct 172170 TCGAAGTCCTCACCACCCAAGTGAGTGTCACCGGCAGTGGACTTGACCTCGAAAATACCC 172229 Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576 | ||||| | | || ||| ||||| || ||||||||||| || || || ||||| || Sbjct 172230 TCCTCAATTGTGAGCAGCGATACATCGAAGGTACCACCACCAAGATCGAAGATGAGCACA 172289 Query 7577 TTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCA 7636 || ||| | || | ||||| ||||||||||| || || || || || || || || Sbjct 172290 TTGCGCTCGCCCTCAGTCTTCTTGTCGAGACCGTAGGCAATGGCTGCTGCAGTCGGCTCG 172349 Query 7637 TTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCC-GCATCTTTCGTCGCTTGTCG 7695 || || ||||| || ||| ||||||||||| | ||| || || || || |||||||| Sbjct 172350 TTGATGATACGGAGGACGTTGAGGCCAGCAAT-GAGGCCGGCGTCCTTGGTTGCTTGTCG 172408 Query 7696 TTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAG 7755 ||||| ||||| || || || || ||||| ||||| |||| |||| | ||| || Sbjct 172409 CTGCGAGTCGTTGAAATATGCTGGAACCGTGACGACGGCGTTGTTGACGGTGCCACCAAG 172468 Query 7756 ATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGC 7815 ||||| || ||| | || ||| || || |||| ||| | || ||||| || | | Sbjct 172469 GTACGACTCTGCGGTCTCACGCATCTTTGTGAGAATCATGGCGGAGATCTCCTCTGGTGT 172528 Query 7816 AAACTGTTTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCACCGGG 7875 ||||| ||| || || || || || || || | || || ||| || Sbjct 172529 GAACTGCTTCTCCTCGCCCTTGAACTCGACCGAGATGACTGGCTT-GCCG--GCCTTCTC 172585 Query 7876 GATAACCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTTCT 7935 ||| ||||| | | | | |||||||| |||| |||| | ||| ||||| | Sbjct 172586 GATGACCTTGAAGGGAAAGTGCTTCATATCTGCTTGCACCTCTGCGTCTTGGAACTTGCG 172645 Query 7936 TCCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTT 7995 ||||| | |||||||| || || ||||||||| ||||||||||| |||||||| Sbjct 172646 GCCGATCAATCGCTTTGCGTCGAAGACTGTGTTTGCTGGGTTCATGGCGACCTGGTTCTT 172705 Query 7996 CGCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTCGT 8055 || || || ||||| ||||| || | || || || |||||| | || || || || Sbjct 172706 GGCAGCATCACCGATTAGACGCTC---GGTGTCTGTGAAGGCGACGAATGAGGGTGTTGT 172762 Query 8056 TCGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGACGCA 8115 || || || || ||||| || || || || | ||| || | | ||| || ||||| Sbjct 172763 GCGGTTGCCCTGATCGTTGGCGATGATCTCGATGCGATCATCTCTGAAGATACCCACGCA 172822 Query 8116 CGAATACGTTGTTCCTAAATCAATACCGATTGCTTGAGTCAT 8157 || ||||| || || || || |||||||||||| | | ||| Sbjct 172823 GGAGTACGTGGTACCCAAGTCGATACCGATTGCTGGTGCCAT 172864 Score = 129 bits (142), Expect = 7e-25 Identities = 258/381 (68%), Gaps = 1/381 (0%) Strand=Plus/Plus Query 7014 CCGTTAAG-ATGGCGGCTTGGACCGTCGCCCCGTATGCGACCGCCTCATCGGGGTTAATC 7072 ||| |||| ||||| || ||||| | || ||||| || || ||||| || ||||| || Sbjct 170233 CCGCTAAGGATGGCAGCCTGGACGGCAGCACCGTAGGCAACGGCCTCGTCTGGGTTGATA 170292 Query 7073 GTTTTATTCAGTTCTTTACCGTTAAAATAATCCGATAACATTTGTTGAATTTTCGGGATT 7132 | | | || | || || ||||| || | || || | ||| | || || || ||||| Sbjct 170293 GATCTGTTTGGCTCCTTGCCGTTGAAGAAGTCGGAGACCATCTTCTGGATCTTGGGGATA 170352 Query 7133 CGTGTCGATCCACCGACCAAAACGATTTCATTCACTTTCGATTTATCGATCTTTGAGTCT 7192 || || || || ||||| | ||||| || | || || || |||||||| | || Sbjct 170353 CGAGTGGAACCGCCGACAAGGACGATCTCGTGGACGGAAGACTTGTCGATCTTGGCATCG 170412 Query 7193 CGAAGTGTTTTTTCGACAGGTTCCATACATTTACGGAACAAGTCCATACACAGTTCCTCA 7252 || || || || || || ||||| |||||| | |||| || || || || Sbjct 170413 CGGAGAGTGCGCTCCACGGGCTCCATGGTGGAACGGAAAAGGTCCTGGCAAAGCTCTTCG 170472 Query 7253 AAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGAATCAATTTCA 7312 || || ||||| || ||||| || ||||| || | ||| ||||| | ||| || || || Sbjct 170473 AAGCGAGCACGCGTGATGGAAGTGTAGAAGTCGATGCCCTCGTAGAGCGAGTCGATCTCG 170532 Query 7313 ATGGTTGTTTGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACACGCCGTTCGTAAA 7372 || | || ||||| | || | || ||||| ||||| || || || || || | | Sbjct 170533 ATAGAAGTCTGTGCGCTGCTGGAGAGGGTGCGCTTCGCGCGTTCGCATGCTGTCCGCAGA 170592 Query 7373 CGACGAAGGGCACGCGGGTTA 7393 ||||||||||| || | |||| Sbjct 170593 CGACGAAGGGCGCGGGCGTTA 170613 >seq605 Length=684431 Score = 123 bits (136), Expect = 3e-23 Identities = 209/302 (69%), Gaps = 3/302 (1%) Strand=Plus/Plus Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 |||||||| | ||||||||| || || || || ||||| || ||||| |||| ||| Sbjct 663172 TCGAAATCCTGACCACCCAAATGGGTGTCACCAGCGGTAGCCTTGACAGTGAAGACACCG 663231 Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576 || | ||||| | | || ||||| || ||||||||||| || || | ||||| ||| Sbjct 663232 CCCTGAATGTGAAGAAGGGAGACATCGAAAGTACCACCACCAAGATCGTAGATGAGGACG 663291 Query 7577 TTCGTATCGTCGTC---TTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGT 7633 || || | ||| ||| ||||||| || |||||||| || || ||||| Sbjct 663292 TTTCGCTCCTTGTCAGACTTGCCGGAGCCGAGACCATATGCGATAGCAGCGGCAGTTGGC 663351 Query 7634 TCATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGT 7693 || || || || || ||| ||| || || || || | | || || || || |||||| Sbjct 663352 TCGTTGATGATGCGGAGAACGTTGAGTCCGGCGATGGCACCAGCGTCCTTGGTGGCTTGT 663411 Query 7694 CGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCG 7753 | || |||||| ||||| || ||||| || | ||| || | | ||| ||||| ||| Sbjct 663412 CTCTGGTTATCGTTGAAGTAAGCTGGGACGGTAATGACGGCCTTCTCGACCTTCTTGCCG 663471 Query 7754 AG 7755 || Sbjct 663472 AG 663473 >seq265 Length=289398 Score = 109 bits (120), Expect = 7e-19 Identities = 240/356 (67%), Gaps = 9/356 (3%) Strand=Plus/Minus Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 ||||| || |||||||| | || || || || || || || | || || || | ||| Sbjct 249832 TCGAAGTCCTCACCACCAAGATGGGTGTCACCGGCCGTTGCCTGAACCTCGAACACACCC 249773 Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTC---AAAAATGAGT 7573 || | | || | || ||||| || ||||||||||| ||||| | ||||| Sbjct 249772 TGGTCGACAGTCAAGATGGAGACATCGAAAGTACCACCACCGAGGTCGTAGACAATGA-- 249715 Query 7574 ACGTTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGT 7633 | ||| || | ||| | |||| ||||| ||||| |||| ||| || || || ||| Sbjct 249714 TCTGGCGT-TCCTTGTC---GGTCTTGTCGAGGCCGTAGGCGAGAGCGGCGGCGGTAGGT 249659 Query 7634 TCATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGT 7693 || || | | ||| || ||| || || || || || | || || || || || Sbjct 249658 TCGTTGACGACACGGAGGACGTTGAGACCGGCGATCGTGCCAGCGTCCTTGGTAGCGGCA 249599 Query 7694 CGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCG 7753 || || | ||||| |||||||| ||||| || ||||| |||| ||||| || | ||| Sbjct 249598 CGCTGGGCGTCGTTGAAGTAGGCTGGGACTGTGACGACTGCGTTGGTGACCTTTTCGCCG 249539 Query 7754 AGATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTC 7809 || || || || |||| || ||||| ||| || | ||| ||||| | |||||| Sbjct 249538 AGGTATGACTCGGCGACTTCCTTCATCTTGCCCAGGATCATGGATGAGACCTCTTC 249483 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635127996808200