Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236725.1_202017-07-
28] 605 sequences; 31,102,602 total letters
Query= NC_014767.1
Length=184095
Score E
Sequences producing significant alignments: (Bits) Value
seq465 145 9e-30
>seq465
Length=198195
Score = 145 bits (160), Expect = 9e-30
Identities = 1077/1718 (63%), Gaps = 55/1718 (3%)
Strand=Plus/Plus
Query 109509 CTGAGACTGATCGATGAATCGACCACGATCAGCCGCCATGT---CGATGATACACTTTTG 109565
||||||||| ||||| || |||||| ||||| ||||| | ||||| ||| || |
Sbjct 128814 CTGAGACTGGTCGATAAAAGCACCACGGTCAGCAGCCATCTGCACGATGTTACGCT---G 128870
Query 109566 GCTAATTTCCCAGACAGTCTTGTACAAATTCTTGATATCATCGGGAATGTCCACGATGTT 109625
||| || |||||||| |||||||| | ||||| || || ||||||| ||||
Sbjct 128871 GCTGATCTCCCAGACGGTCTTGTAGAGTGCCTTGAGGTCGTCTGGAATGTTGGGGATGCG 128930
Query 109626 TTGAATAGAGCCAC---CAGCCTTCACCATGAGATCCTTCATCTCTTTCGACCAGAGACC 109682
||||| |||||| |||| | | || | | |||||| | | |||||||| ||
Sbjct 128931 CTGAATGGAGCCATTGTCAGCGATGA---TGCGGTTCTTCATGTTCTCTGACCAGAGGCC 128987
Query 109683 GACCTTTTTGAGATCGTCAACAAG--ATGCTTGTTGACCACGACAAATTCACCAGCAAGT 109740
| |||||| | | ||| ||| |||||| || || || ||||| |
Sbjct 128988 ACGGTCGACGAGATCCTTCAGAAGCCATGG--GTTGACGACCTGGAACTCGCCAGCCAAC 129045
Query 109741 GTGCGTCGGAGGTAGATGTTAGTCGTGTAGGGTTCGAAACACTCATTGTTGCCTAGGATT 109800
|| || ||| ||||| | ||||| || ||||| ||||| || ||| | |||
Sbjct 129046 ACACGACGAGAGTAAATGTTGCTTGTGTATGGCTCGAAGCACTCGTTAAAGCCCATGATC 129105
Query 109801 TGTGCAGTGGAAGCTGTGGGCATGGGAGCCATGAGAAGACTGTTTCGGAGACCCTTC--G 109858
|| | || || ||||| ||||| || || | |||||| ||| || | ||| | | |
Sbjct 129106 TGCGAGGTCGAGGCTGTTGGCATCGGCGCAACGAGAAGCGAGTTGCGCACACCGTGCTGG 129165
Query 109859 TCTTTACCCGCTCACGCATTGCGTCCCAATCATAACGACCACTAAATTTAGTCTCACCAT 109918
| | | || | | | |||| |||| || | | | || ||||| ||
Sbjct 129166 GCGAT-CTTGCCCTTG-AGTGCGGCCCAGTCCCAGAGGTCGGTAGG---AGTCTTGCC-- 129218
Query 109919 CCCACATATCTGGTTGAAGTACACCCTCAGCAGCAGGAGAACCCTTGAAACTCTCGTACG 109978
|||||| || || || | |||| | | ||||| || | | ||||||| |
Sbjct 129219 -CCACATGTCGTACTGGAGCTCGCCCTGCGATACTGGAGAGCCTGGGTATGTCTCGTAAG 129277
Query 109979 ACCCCTCAACCTCGGCCAACTCGGATGAAGCCTCTAGTGCCGCATGATACATAGTCTCAA 110038
|| ||| || | |||| |||||||||| || || |||||||| || |||||||
Sbjct 129278 GACCGAGCTTCTCAGCAAGCTCGCATGAAGCCTCAAGAGCAGCATGATAGATGGTCTCAA 129337
Query 110039 AAATATGAGCATTCATGAGGCGAGACTCTTCACAGTCGAAGGGAA----GACCACAAAGA 110094
|||| || ||| | | ||| ||||||| || | || | ||||
Sbjct 129338 AAATCTGGATATTAAGCTCCTTGGCCTCAGGCGAGTCGAATGGCATGCGGAGAGCCAAGA 129397
Query 110095 ATAAACACATCCGCTAGACCCTGAACACCGAGACCAATGGGGCGATGCTTCATGTTAGAG 110154
| |||| || ||||| | ||||| ||||||||||| || || | |||
Sbjct 129398 AGG----CATCAGCAAGACCGTTGACACCAAGACCAATGGGTCGGTGGCGGAAGTTGCTC 129453
Query 110155 CGTCGAGCAGTTTCTACGGGGTAAAAGTTGCGGTCGATGACCCGATTGAGATTCTTCGTC 110214
||| || | ||| ||||| ||||| |||||| | || || || ||
Sbjct 129454 TTTCGTGCCTCTGGTACTGGGTAGTAGTTGATCTCGATGGTCTTGTTCAGGTTACGTGTG 129513
Query 110215 ACAGTCTTCGTGATTTCATGGAGTTTGTCGTAATCGAACGTTTTCGTCTCCTTATTGACA 110274
|| || |||| || || ||||| | | | || || | |||| | | |||
Sbjct 129514 ACCACTTTGGTGACCTCGTGAAGTTTCTTGAAGTCAAAAACCTCGTTCTCGATGTCGACG 129573
Query 110275 TATTTGGGGAGAGCAATAGACGCAAGATTGCACACAGAAGTCTCGTCTTTGTCGGTGTAT 110334
|| |||| ||||||| || || |||||||| |||| ||| ||| | | |||
Sbjct 129574 TAGGTGGGCAGAGCAAGCGAAGCCAGATTGCAGACAGCGACCTCATCTGGAGCAGAGTAC 129633
Query 110335 TCCAAAATTTCCGTACACAAGTTGGAACTCTTAATGACACCCAAGTTCTTCTGATTCGAT 110394
|||| || || || ||||| || || ||||| ||| || | |||||||||||
Sbjct 129634 TCCATGATCTCAGTGCACAAATTAGAGCTCTTGATGGTGCCAAGATTCTTCTGATTGCTC 129693
Query 110395 TTGGAGTTGCATGCATCCTTATAGAGCATGTATGGGGTACCAGTTTCCGTCTGTGACTTG 110454
||| |||| || ||||| || || ||| | || || || || || ||||| | || |
Sbjct 129694 TTGCGGTTGGCGGCGTCCTTGTACAGAATGAAAGGTGTGCCGGTCTCGGTCTGCGCCTCG 129753
Query 110455 AGAATGGCCTTCCATACATCGGCGGCGGGGACAGTTGCGTTAGCGAGACCTTCCTCCTCG 110514
||||| || | ||||| | || | || || | | ||||| |||
Sbjct 129754 AGAATAGCATACCATATTTTCTGAGCACGAACCGTCTCACGGCCCTTGCCTTCTCTCTCA 129813
Query 110515 TACTTGGTGTACAAGTCCTCAAATTCCTGTCCGTACACATCAGAAAGACCCTTCGCCTT- 110573
|| ||||| |||| || || | ||||| ||||| || ||| || || ||
Sbjct 129814 TAACGCTCGTACAGCTCCTTGAACTCGTCACCGTAAACATCCGACAGA-CCAGGGCATTC 129872
Query 110574 GTCGGGACAGAAGAGGGACCAATTTCCACCCTCCTCAACCCTCTTCATGAACAGGTCAGG 110633
|| ||| || | || | |||| | || || || || | || ||| || || || ||
Sbjct 129873 GTTGGGGCACATCAGAGTCCAAGTGCCGTTCTGTTCGACACGCTGCATAAAGAGATCGGG 129932
Query 110634 AATCCACATCGCCGAGAAAAGGTCACGGCAACGAGCCTCTTCATCACCTTGGTTGAGGCG 110693
|||||| | || |||| | || || |||| | ||||| | || ||||| |||
Sbjct 129933 AATCCAGAGAGCGTAGAACAAATCGCGCGCACGAACTTCTTCCTTTCCATGGTTCTTGCG 129992
Query 110694 TAGCTCCAAAAAGTCCATGATATCCGAGTGCCATGGTTCGAGATAGACAGCGA------- 110746
|| |||| || | ||||| || | ||||| || || || |||| || |
Sbjct 129993 AAGGTCCATGAACTGCATGACGTCTGCATGCCACGGCTCAAGGTAGATGGCAAAAGCACC 130052
Query 110747 TGGATCCCTTACGACGACCCGCCTGGTTAACATAGCGTGCTGTGGCATTGAAGACCCTGA 110806
|||| | ||| | | || |||||| ||| || || || ||| || |||| | |
Sbjct 130053 TGGA-CGCTT--GTTG-CCACCCTGGTCAACGTAACGAGCAGTGTTGTTATAGACTCGTA 130108
Query 110807 GCATAGGAATAATTCCATCGGATTGACCATTTGTACCCCTAAT-TCTGGACTTATTGGCA 110865
|||| || | || || | |||| || ||||| || | ||| | || | | ||||
Sbjct 130109 GCATTGGTACAAGACCGTTGGATGTGCCGTTTGTGCCGCCAATGTATGAGCCT-GTGGCC 130167
Query 110866 CGAATGTCGTGGATATGCATACCAATACCACCCGCCCACTTACTAATTTGTGCACA-CTC 110924
| |||| ||| | ||| | ||||||||| || || ||| || ||||| ||
Sbjct 130168 CTGATGTTGTGAACATGAAGACCAATACCGCCAGCGTTCTTGGAGATCATGGCACATATC 130227
Query 110925 TGTGAGTGTACCATAAATACCATCAATCGAATCTGCCTTGTTGGCAATTAGAAAGCAAGA 110984
| |||| ||| | || ||||||||||| || |||| |||| | | ||||| ||
Sbjct 130228 T-TGAGGGTATCGTAGATACCATCAATGCTGTCATCCTTCATGGCCACCAAGAAGCAGGA 130286
Query 110985 AGACATCTGAGGACGAGGCGTTCCCGCATTGAAGAGTGTAGGTGTCGCATGAATGAACAG 111044
| | ||| | | || || || ||| |||| ||||| || | ||||| ||| ||
Sbjct 130287 TGCTAGCTGCGCCTGTGGGGTACCAGCACTGAAAAGTGTTGGCGAAGCATGTGTGA--AG 130344
Query 111045 ACCTT--GGGACATCTTGTTGTATGTGTCGAGTGCGGAGGGTACATCTTTACCGTGAATA 111102
||| ||||| | ||||||||| || | || | | |||| || |||||
Sbjct 130345 TACTTCAACGACATGTAGTTGTATGTCTCAATCGCTGCTTCAATGTCTTCCCCATGAATG 130404
Query 111103 CCAATGGCAACTCGCATGAACATATATTGAGGCGTTTCGATTAGCTTTCCATCAACACGC 111162
|| | || || ||||||| ||| | ||| || | ||| | ||| || |||| |
Sbjct 130405 CCGACAGCCACACGCATGATCATCTGTTGCGGTCTCTCGGCAACCTTGCCGTCAATTCTG 130464
Query 111163 TGAAGGTAACTCTTCTCTAGGGTCTTGAGACCAAAGTA 111200
||||||| ||| || ||||||| || |||||
Sbjct 130465 AGAAGGTATGATCGCTCCAGAGTCTTGAAGCCGAAGTA 130502
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 588971545869000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |