Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236725.1_202017-07- 28] 605 sequences; 31,102,602 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq465 197 2e-45 seq122 176 5e-39 seq594 127 2e-24 seq11 104 3e-17 seq144 98.7 1e-15 >seq465 Length=198195 Score = 197 bits (218), Expect = 2e-45 Identities = 803/1242 (65%), Gaps = 39/1242 (3%) Strand=Plus/Plus Query 80539 CCCCACATGTCGTGCTGCAAGATGCCCTCCGACGCCGGAGACCCCGCGAACGTCTCGTAC 80598 ||||||||||||| ||| | ||||| ||| | ||||| || | | | |||||||| Sbjct 129217 CCCCACATGTCGTACTGGAGCTCGCCCTGCGATACTGGAGAGCCTGGGTATGTCTCGTAA 129276 Query 80599 GGGCCCTCCGTCTTGGCCAGCTCACACGACTCCATAAGGGCCGCGTGATAAATGCACTCA 80658 || || | ||| || ||||| || || || ||| || || ||||| ||| |||| Sbjct 129277 GGACCGAGCTTCTCAGCAAGCTCGCATGAAGCCTCAAGAGCAGCATGATAGATGGTCTCA 129336 Query 80659 AAGACGCCCTTGTTCA-CACCGCGCGCCTGTGGGTCGTCGAACGACAAGCCCATCATCAT 80717 || | | || | | || | |||| || |||||| | || || | || Sbjct 129337 AAAATCTGGATATTAAGCTCCTTG-GCCTCAGGCGAGTCGAATGGCATGCGGAGAGCCAA 129395 Query 80718 GAACACGTCAGCCAGGCCCTGAACGCCGATGGCGATCGGGCGGTGGCGCTTGTTCGATCG 80777 ||| | ||||| || || | || || | | || || |||||||| ||| | || Sbjct 129396 GAAGGCATCAGCAAGACCGTTGACACCAAGACCAATGGGTCGGTGGCGGAAGTT-GCTCT 129454 Query 80778 CTCG-GCCTCCGGAATTGGGTAAAAGTTATTATCGATGACGCGGTTCAGGTTGCGTGTAA 80836 ||| ||||| || | |||||| |||| | |||||| ||||||||| ||||| | Sbjct 129455 TTCGTGCCTCTGGTACTGGGTAGTAGTTGATCTCGATGGTCTTGTTCAGGTTACGTGTGA 129514 Query 80837 CAACCCGTGTAACATCATGAAGTTTCTGAAAGTCGAAT---TGGTTCCCCTTCACAA--- 80890 | || || || || |||||||||| ||||| || | |||| | | | | Sbjct 129515 CCACTTTGGTGACCTCGTGAAGTTTCTTGAAGTCAAAAACCTCGTTCTCGATGTCGACGT 129574 Query 80891 ATGCCGGAAGGCTCAGGGACGCCAGATTGCACACGGCCACCTCTTCAGCATCTGTAAACT 80950 | | || || || || ||||||||||| || || ||||| || | | | | ||| Sbjct 129575 AGGTGGGCAGAGCAAGCGAAGCCAGATTGCAGACAGCGACCTCATCTGGAGCAGAGTACT 129634 Query 80951 CGACGATTTCCGTGCACAAATTAGAAGACTTAATTGTACCCAGGTTTTTCTGGTTTGACT 81010 | | ||| || |||||||||||||| ||| || || || || || ||||| || || Sbjct 129635 CCATGATCTCAGTGCACAAATTAGAGCTCTTGATGGTGCCAAGATTCTTCTGATTGCTCT 129694 Query 81011 TGGCGTTGCAAGCGTCCTTGTAGCACATGTACGGGGTACCGGTCTCGACCTGTGACTTGA 81070 || |||| ||||||||||| ||| | || || ||||||||| ||| | || || Sbjct 129695 TGCGGTTGGCGGCGTCCTTGTACAGAATGAAAGGTGTGCCGGTCTCGGTCTGCGCCTCGA 129754 Query 81071 GGATGGCGTCCCAAATCTCGCGCGCCTTGACCACCTTGCGGAATTTGCCTTCGGCCACAT 81130 | || || | ||| || | | || ||| || ||| |||||||| | ||| Sbjct 129755 GAATAGCATACCATATTTTCTGAGCACGAACCGTCTCACGGCCCTTGCCTTCTCTCTCAT 129814 Query 81131 ACTTGGCGTA-AGCTTCGTCGAACTTGGCACCGTGAAGTTCAGTGAGGTCTGGGCACTCG 81189 | |||| ||| || | ||||| | |||||| || || | || | ||||| ||| Sbjct 129815 AACGCTCGTACAGC-TCCTTGAACTCGTCACCGTAAACATCCGACAGACCAGGGCATTCG 129873 Query 81190 TTAGGGCACATCAGGTGCCAGTCGGTGTCGTTC---TCTACAGCCTTCATGAAAGCG-TC 81245 || ||||||||||| ||| ||| ||||| || ||| || ||| |||| | || Sbjct 129874 TTGGGGCACATCAGAGTCCA---AGTGCCGTTCTGTTCGACACGCTGCAT-AAAGAGATC 129929 Query 81246 AGGGATCCAGAGGGCGGTGAACAGGTCGCG-GCAGCGCGCCTCCTCATCACCCTGGTTGA 81304 || |||||||| ||| ||||| ||||| ||| || | || || | || ||||| Sbjct 129930 GGGAATCCAGAGAGCGTAGAACAAATCGCGCGCA-CGAACTTCTTCCTTTCCATGGTTCT 129988 Query 81305 GGCGCAACTCGAGAAAGTCCATGATGTCCGCATGCCATGGCTCCAGATACACGGCGATCG 81364 ||| | || | || | ||||| ||| |||||||| ||||| || || | ||| | | Sbjct 129989 TGCGAAGGTCCATGAACTGCATGACGTCTGCATGCCACGGCTCAAGGTAGATGGCAAAAG 130048 Query 81365 ACCCCTTGCGACG------GCCACCCTGGTTGACGTAACGGGCAGTCGCGTTAAATACAC 81418 | ||| |||| ||||||||||| |||||||| ||||| |||| | || | Sbjct 130049 -CACCT--GGACGCTTGTTGCCACCCTGGTCAACGTAACGAGCAGTGTTGTTATAGACTC 130105 Query 81419 GCAACATAGGGATGATACCATCTGACTGACCGTTCGTACCCACGATACGCGACCCCTTGG 81478 | | ||| || | | ||| | || ||||| || || | || || || ||| Sbjct 130106 GTAGCATTGGTACAAGACCGTTGGATGTGCCGTTTGTGCCGCCAATGTATGAGCCTGTGG 130165 Query 81479 CGCGCACCTTGCTGA--TTGAAAGACCGATGCCACCTGACCACTTTGAAATCTGAGCACA 81536 | | | ||| ||| || |||||| || || || | ||| || ||| ||||| Sbjct 130166 CCCTGATGTTG-TGAACATG-AAGACCAATACCGCCAGCGTTCTTGGAGATCATGGCACA 130223 Query 81537 CCGGTTCATGGTCTCATAAATTCCCTCGATGCTATCTTTTTTCATGTCAAGCAAGAAACA 81596 || | ||| || || || || || ||||| || | |||||| | | |||||| || Sbjct 130224 TATCTTGAGGGTATCGTAGATACCATCAATGCTGTCATCCTTCATGGCCACCAAGAAGCA 130283 Query 81597 GCTTGACATCTGAGGGCTTTTTGAG--CCGGCATTGAACAGTGTTGGGGTCGCGTGAATG 81654 | || | || | || | | | | || ||| |||| |||||||| | || || || Sbjct 130284 GGATGCTAGCT--GCGCCTGTGGGGTACCAGCACTGAAAAGTGTTGGCGAAGCATGTGTG 130341 Query 81655 AAATAACGGTTTGACATCAGGTCATAGGTTTCCTTGACGCGTGGAATATCGTCACCGTGA 81714 || || ||||| || || || || | | | ||| || || || ||| Sbjct 130342 AAGTACTTCAACGACATGTAGTTGTATGTCTCAATCGCTGCTTCAATGTCTTCCCCATGA 130401 Query 81715 ATACCGATAGCTACACGCATAAACATGTACTGGGGCGTCTCG 81756 || |||| ||| |||||||| | ||| | || || ||||| Sbjct 130402 ATGCCGACAGCCACACGCATGATCATCTGTTGCGGTCTCTCG 130443 >seq122 Length=383522 Score = 176 bits (194), Expect = 5e-39 Identities = 175/227 (77%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| |||||||| || ||||||||||| || || || ||||| ||||| | Sbjct 337383 ATGCAGATCTTCGTCAAGACTCTCACCGGCAAGACCATCACCCTCGAGGTCGAGTCCAGC 337442 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||| | ||| | ||| | || || |||||||||||||| || || || |||||| Sbjct 337443 GACACCATCGACAATGTCAAGTCGAAGATCCAGGACAAGGAGGGTATCCCACCTGACCAG 337502 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||||| || |||||||| || ||||| |||||||||| |||||| || | ||||| || Sbjct 337503 CAGCGCCTGATTTTTGCAGGCAAGCAGCTCGAGGATGGTCGTACTCTGTCCGACTACAAC 337562 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| || ||||| ||||| || | || | ||||| || ||||| Sbjct 337563 ATCCAGAAAGAATCGACTCTCCACTTGGTGCTTCGTCTCCGTGGTGG 337609 Score = 141 bits (156), Expect = 1e-28 Identities = 153/203 (75%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 27430 ACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCAAATTTGAAGGCT 27489 ||||||||||| ||||| || ||||||||||| || | ||| | ||| ||||| Sbjct 337179 ACCGGCAAGACCATTACCCTCGAGGTTGAGTCGTCCGACACCATCGACAATGTGAAGAGC 337238 Query 27490 AAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAG 27549 || || ||||| ||||| || ||||| || |||||||| || | ||||| || || ||| Sbjct 337239 AAGATCCAGGATAAGGAAGGCATTCCACCTGACCAGCAACGCTTGATTTTCGCAGGCAAG 337298 Query 27550 CAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCAT 27609 || |||||||| | ||| ||||| | ||||| || | || ||||| |||||| ||| Sbjct 337299 CAGCTCGAGGACGGTCGCACCCTGTCCGACTACAACATTCAGAAGGAGAGCACTCTCCAT 337358 Query 27610 CTAGTCTTGCGTCTTCGCGGTGG 27632 || ||| | |||||||| ||||| Sbjct 337359 CTCGTCCTCCGTCTTCGTGGTGG 337381 Score = 132 bits (146), Expect = 5e-26 Identities = 168/231 (73%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||||| || |||||||| || ||||||||||| || || || || || || ||| Sbjct 337611 ATGCAAATTTTCGTCAAGACACTCACCGGCAAGACCATCACACTCGAAGTGGAATCATCC 337670 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | || | || | ||| | || || || ||||||||||| || || || |||||| Sbjct 337671 GACACGATCGACAACGTCAAGTCAAAGATCCAAGACAAGGAGGGCATCCCACCGGACCAG 337730 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 |||||||| || || || || ||||| || ||||| | || || || | || || || Sbjct 337731 CAGCGTCTCATCTTCGCCGGCAAGCAGCTTGAGGACGGCCGGACACTTTCGGATTACAAC 337790 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGACAA 27636 |||| ||||| |||||||| || | || ||||||| || || || ||| Sbjct 337791 ATCCAGAAGGAGTCCACTCTGCACTTGGTGCTGCGTCTCCGTGGAGGCCAA 337841 >seq594 Length=758675 Score = 127 bits (140), Expect = 2e-24 Identities = 141/188 (75%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 27408 GCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGA 27467 ||| | ||| || ||||| || || |||||||| || || || ||||| ||||| | || Sbjct 249927 GCACAGCTTCGTAAAGACCCTCACTGGCAAGACCATCACGCTCGAGGTCGAGTCGAGCGA 249986 Query 27468 TAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCA 27527 | ||| | ||| | ||| || || ||||||||||||||||| || || |||||||| Sbjct 249987 CACCATCGACAATGTCAAGAGCAAGATCCAGGACAAGGAGGGAATCCCACCGGACCAGCA 250046 Query 27528 GCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGT 27587 |||| | || || ||||| ||||| | ||||||| ||| ||||| | ||||| || | Sbjct 250047 GCGTTTGATCTTCGCTGGAAAGCAGTTGGAGGATGGTCGCACCCTCTCCGACTACAACAT 250106 Query 27588 CCAAAAGG 27595 ||| |||| Sbjct 250107 CCAGAAGG 250114 >seq11 Length=671378 Score = 104 bits (114), Expect = 3e-17 Identities = 279/423 (66%), Gaps = 8/423 (2%) Strand=Plus/Minus Query 31984 GACGGCCTCAAGCCTTCACAGCGCAAGGTGATATACGCCTGCCTCAAGAAGAACCTGTCG 32043 |||||| | ||||| ||||| || || || ||| | || || |||||| | Sbjct 358959 GACGGCTTGAAGCCGGGTCAGCGAAAAGTCATGTACACATGTTTCCGCCGCAACCTGAAG 358900 Query 32044 AGTGACATGAAGGTGGCGCAGCTGTCGGGCTACGTGGCAGAGCAAACGGCCTATCACCAC 32103 | || | ||||||| | ||||| | || | || | | | || || || | || Sbjct 358899 AAAGATGTCAAGGTGGTGGAGCTGGCTGGTTCAGTCTCCGGCCTCACCGCATACCCGTAC 358840 Query 32104 GGCGAGGCGTCGCTCCAGGGCACCATTGTCAACCTTGCTCAGAACTTTGTCGGTGCAAAT 32163 || ||| | || || ||| ||||| || || ||||||||||| || ||| | || Sbjct 358839 GGTGAGACATCACTGCAGCAAACCATCATCGGTCTGGCTCAGAACTTCGTGGGTTCCAAC 358780 Query 32164 AACCTGAACTTACTCGAGCCATCTGGACAGTTTGGGACCCGGCTCGCCGGTGGCAAGGAT 32223 ||| ||||| | |||||||| ||| | ||||| | || || |||||||| ||| Sbjct 358779 AACATGAACATCCTCGAGCCGAGTGGCAATTTTGGATCACGTCTGCAAGGTGGCAACGAT 358720 Query 32224 GCTGCGAGCTCCCGTTACATCTTCAC----CCGTCTCGCACCTTCGACGCGCAAGATTTT 32279 || || || | |||||||| | ||| | ||||| ||| | ||| | || ||| || Sbjct 358719 GCGGCCAGTCCTCGTTACATATACACGAGACTGTCTC-CACTTGCGA-GGGC--GATCTT 358664 Query 32280 CGACCCGTCGGACGATGCGGTGCTCAAGTACAATTTTGATGACGGTCAGCGGGTCGAGCC 32339 ||| | || || ||| |||| | |||||| || ||||| || |||| || Sbjct 358663 TCACCAGAGCGATGAAGCGCTGCTGACGTACAACACCGACGACGGCAAGACCATCGAACC 358604 Query 32340 GGTGTTCTACAGTCCGGTGCTTCCGATGATCTTGGTGAACGGTGCAGAAGGCATCGGAAC 32399 || | | || ||| | | ||||||||| || | |||||||| || ||||||||||| Sbjct 358603 GGAGATGTATGTTCCAATCTTGCCGATGATCCTGATCAACGGTGCTGATGGCATCGGAAC 358544 Query 32400 GGG 32402 || Sbjct 358543 CGG 358541 >seq144 Length=374410 Score = 98.7 bits (108), Expect = 1e-15 Identities = 102/134 (76%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 27499 GACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAG 27558 ||||||||||||||||| || ||||||||||| | || || || || ||||| |||||| Sbjct 43913 GACAAGGAGGGAATTCCACCGGACCAGCAGCGCTTGATCTTCGCCGGCAAGCAGCTCGAG 43854 Query 27559 GATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTG 27618 |||| || ||||| | ||||| || | || ||||| ||| || || || ||| | Sbjct 43853 GATGGCCGCACCCTCTCCGACTACAACATTCAGAAGGAGAGCACCCTCCACCTCGTCCTC 43794 Query 27619 CGTCTTCGCGGTGG 27632 ||||| || ||||| Sbjct 43793 CGTCTGCGTGGTGG 43780 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570306087027600