Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236725.1_202017-07- 28] 605 sequences; 31,102,602 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq122 123 2e-23 seq594 118 8e-22 seq144 89.7 4e-13 >seq122 Length=383522 Score = 123 bits (136), Expect = 2e-23 Identities = 155/213 (73%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 44125 CAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTC 44184 || ||||| ||| || ||| |||||| |||||||||||||| | ||| || |||| Sbjct 337823 CAGCACCAAGTGCAGAGTGGACTCCTTCTGGATGTTGTAATCCGAAAGTGTCCGGCCGTC 337764 Query 44185 GTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTC 44244 || |||||||| ||||| ||||| | ||||||||| || | || | || ||||| || Sbjct 337763 CTCAAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCCGGTGGGATGCCCTCCTTGTC 337704 Query 44245 CGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGT 44304 ||||| ||| | | | || ||||||| |||||||| || | || || || Sbjct 337703 TTGGATCTTTGACTTGACGTTGTCGATCGTGTCGGATGATTCCACTTCGAGTGTGATGGT 337644 Query 44305 CTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||| || ||||| ||||| ||||| |||||||| Sbjct 337643 CTTGCCGGTGAGTGTCTTGACGAAAATTTGCAT 337611 Score = 111 bits (122), Expect = 1e-19 Identities = 153/212 (72%), Gaps = 4/212 (2%) Strand=Plus/Minus Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTC 44187 ||||| ||| || || || || ||||||||||| |||| || || | || || Sbjct 337592 CACCAAGTGGAGAGTCGATTCTTTCTGGATGTTGTAGTCGGACAGAGTACGACCATCCTC 337533 Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247 |||||||| || ||||| |||| |||||||| || | || | ||| ||||| ||| Sbjct 337532 GAGCTGCTTGCCTGCAAAAATCAGGCGCTGCTGGTCAGGTGGGATACCCTCCTTGTCCTG 337473 Query 44248 TATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTC 44305 |||||| ||| || ||| | ||||||||| ||| || ||||| | || || ||| Sbjct 337472 GATCTTCGACTTGACATTGT--CGATGGTGTCGCTGGACTCGACCTCGAGGGTGATGGTC 337415 Query 44306 TTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || || ||||| ||||| |||||||| ||||| Sbjct 337414 TTGCCGGTGAGAGTCTTGACGAAGATCTGCAT 337383 Score = 104 bits (114), Expect = 2e-17 Identities = 135/187 (72%), Gaps = 0/187 (0%) Strand=Plus/Minus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 || || || || ||||||||||| || |||||||| |||| || ||| |||| || Sbjct 337363 ACGAGATGGAGAGTGCTCTCCTTCTGAATGTTGTAGTCGGACAGGGTGCGACCGTCCTCG 337304 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 |||||||| || || || ||||| || ||||| || | || | |||||||| ||| Sbjct 337303 AGCTGCTTGCCTGCGAAAATCAAGCGTTGCTGGTCAGGTGGAATGCCTTCCTTATCCTGG 337244 Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308 ||||| ||||| | | |||||||||| || || ||||| | ||||| ||||| Sbjct 337243 ATCTTGCTCTTCACATTGTCGATGGTGTCGGACGACTCAACCTCGAGGGTAATGGTCTTG 337184 Query 44309 CCCGTGA 44315 || |||| Sbjct 337183 CCGGTGA 337177 >seq594 Length=758675 Score = 118 bits (130), Expect = 8e-22 Identities = 145/196 (74%), Gaps = 4/196 (2%) Strand=Plus/Minus Query 44142 TGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGG 44201 ||| | |||| ||||||||||| |||| ||| ||| | || |||| |||||| || | Sbjct 250120 TGCACACCTTCTGGATGTTGTAGTCGGAGAGGGTGCGACCATCCTCCAACTGCTTTCCAG 250061 Query 44202 CAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTT-- 44259 | ||||||||||||||||| || | || | || ||||| ||| ||||| ||| Sbjct 250060 CGAAGATCAAACGCTGCTGGTCCGGTGGGATTCCCTCCTTGTCCTGGATCTTGCTCTTGA 250001 Query 44260 CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGT 44319 || ||| | ||||||||| || || ||||| | ||| || ||||| || |||||||| Sbjct 250000 CATTGT--CGATGGTGTCGCTCGACTCGACCTCGAGCGTGATGGTCTTGCCAGTGAGGGT 249943 Query 44320 CTTCACGAAGATTTGC 44335 ||| |||||| | ||| Sbjct 249942 CTTTACGAAGCTGTGC 249927 >seq144 Length=374410 Score = 89.7 bits (98), Expect = 4e-13 Identities = 91/119 (76%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 || ||||| || ||||||||||| || |||||||| |||| ||| ||| | || || Sbjct 43798 ACGAGGTGGAGGGTGCTCTCCTTCTGAATGTTGTAGTCGGAGAGGGTGCGGCCATCCTCG 43857 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247 |||||||| ||||| |||||||| |||||||| || | || | || ||||| || || Sbjct 43858 AGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCCGGTGGAATTCCCTCCTTGTCTGT 43916 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359987745633285