Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236745.1_202017-07-
28] 658 sequences; 37,414,534 total letters
Query= NC_001884.1
Length=134416
Score E
Sequences producing significant alignments: (Bits) Value
seq98 116 3e-21
seq97 100 2e-16
>seq98
Length=18119
Score = 116 bits (128), Expect = 3e-21
Identities = 238/345 (69%), Gaps = 13/345 (4%)
Strand=Plus/Minus
Query 94315 AGGATAACCGGCATCCGATCATGGATGTCTTCCATAAGCTCATTAGGCTTTGTTGTAATG 94374
|| || || ||||| ||||| |||||||| ||||||| ||||| | || ||||||
Sbjct 12984 AGAATGACTGGCATACGATCGTGGATGTCCGCCATAAGACGGTTAGGTTCAGTAGTAATG 12925
Query 94375 ATTGTGCAAGTGTATAAAGGATTGCCTTCTGGTGTGTTCCACTTTTCGTATAAGCCTGCA 94434
|| |||||||| | | || |||||||| |||| | || |||||||| |||
Sbjct 12924 ATAGTGCAAGTTGAAACCTTTTTACCTTCTGGATCAATCCAAGTATCATATAAGCCAGCA 12865
Query 94435 AAAGCGAAGA--GATTGGACGATTTAAGTTTAATCCGCATAGGAATCTTAGTCTTTGGAT 94492
| | ||||| || | | ||| | | |||||| || || ||| | ||||
Sbjct 12864 AGCGAGAAGATGGAGTCATC--TTTCATTAAAATCCGTATGGGTTGCTT----TACGGAT 12811
Query 94493 CAAGGCGTTT-CCATTCATAAAAACTGTCAGC-CGGTATGATACAACGTTTGCTTACGAG 94550
| | | ||| |||||||||||| | ||| || || |||||||| ||| ||
Sbjct 12810 CCATCCTTTTTCCATTCATAAAATC-CCGAGCATGGGATAATACAACGCTTGGAACTGAT 12752
Query 94551 C-GGCTTTCGAAAGCTGGGTTTCTCGGACAATGTTTCAGCACGGGCATTAATCATTTTAT 94609
| ||| || || ||| |||||||| | | |||||| |||||||| |||||||| ||||
Sbjct 12751 CAGGCGTTTAAAGGCT-GGTTTCTCTGTGAGTGTTTCTGCACGGGCGTTAATCATCTTAT 12693
Query 94610 AGCCGATCTTTTCGTCTTTAGCCCATGGAGGGATAAGACCCCATC 94654
||| || ||||| || || ||||| ||| | ||||||||||
Sbjct 12692 TGCCTATTTTTTCATCCTTGGCCCAATTAGGAACTAGACCCCATC 12648
>seq97
Length=18159
Score = 100 bits (110), Expect = 2e-16
Identities = 196/290 (68%), Gaps = 0/290 (0%)
Strand=Plus/Plus
Query 123905 GATTGGATGAAGCTTAAAGAAGATGTAATGAAATATGGTCTTTATCATTCCTATAGACAA 123964
||||||| |||||||| | || ||| || |||| || |||||| ||||| |
Sbjct 16823 GATTGGAAACAGCTTAAATTTAAAGTGATGGAAAATGGCCTCTATCATGCCTATCGCATG 16882
Query 123965 GCTATTGCGCCTACGGGAAGCATCTCATATGTTCAATCATCTACAGCAGGTGTAATGCCA 124024
|||||||| || || | ||||||||| ||| | ||| | ||| | ||||||||||
Sbjct 16883 GCTATTGCTCCAACAGCAAGCATCTCTTATATCCAAAATGCAACATCCAGTGTAATGCCC 16942
Query 124025 ATTATGGAGAGAATTGAGGAACGTACATACGGAAACAGTAAGACATATTATCCGATGCCA 124084
||| | || ||||||| ||| || || | || | || ||||||||||||||
Sbjct 16943 ATTGTAGAACAAATTGAGACACGAACCTATGCCAATTCAACCACGTATTATCCGATGCCC 17002
Query 124085 GGTTTATCGGCTCAGAATTGGTTCTTCTATAAGGAAGCATACGACATGGATATGTTTAAG 124144
|||| | ||| |||| || || ||| || | |||||| || |||
Sbjct 17003 TATTTACAAAAGGATAATGTCTTCTATTACAAATCAGCGTATCAGATGGATCAATTCAAG 17062
Query 124145 GTAGTTGATCTTATTGCAACAATTCAGCAGCACGTCGACCAAGGGATTTC 124194
||| ||||| | ||||| ||||||| ||| || |||||||| || ||
Sbjct 17063 GTAATTGATTTGATTGCGGAGATTCAGCCGCATGTGGACCAAGGAATCTC 17112
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 430002951617426
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |