Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236745.1_202017-07- 28] 658 sequences; 37,414,534 total letters Query= NC_001884.1 Length=134416 Score E Sequences producing significant alignments: (Bits) Value seq98 116 3e-21 seq97 100 2e-16 >seq98 Length=18119 Score = 116 bits (128), Expect = 3e-21 Identities = 238/345 (69%), Gaps = 13/345 (4%) Strand=Plus/Minus Query 94315 AGGATAACCGGCATCCGATCATGGATGTCTTCCATAAGCTCATTAGGCTTTGTTGTAATG 94374 || || || ||||| ||||| |||||||| ||||||| ||||| | || |||||| Sbjct 12984 AGAATGACTGGCATACGATCGTGGATGTCCGCCATAAGACGGTTAGGTTCAGTAGTAATG 12925 Query 94375 ATTGTGCAAGTGTATAAAGGATTGCCTTCTGGTGTGTTCCACTTTTCGTATAAGCCTGCA 94434 || |||||||| | | || |||||||| |||| | || |||||||| ||| Sbjct 12924 ATAGTGCAAGTTGAAACCTTTTTACCTTCTGGATCAATCCAAGTATCATATAAGCCAGCA 12865 Query 94435 AAAGCGAAGA--GATTGGACGATTTAAGTTTAATCCGCATAGGAATCTTAGTCTTTGGAT 94492 | | ||||| || | | ||| | | |||||| || || ||| | |||| Sbjct 12864 AGCGAGAAGATGGAGTCATC--TTTCATTAAAATCCGTATGGGTTGCTT----TACGGAT 12811 Query 94493 CAAGGCGTTT-CCATTCATAAAAACTGTCAGC-CGGTATGATACAACGTTTGCTTACGAG 94550 | | | ||| |||||||||||| | ||| || || |||||||| ||| || Sbjct 12810 CCATCCTTTTTCCATTCATAAAATC-CCGAGCATGGGATAATACAACGCTTGGAACTGAT 12752 Query 94551 C-GGCTTTCGAAAGCTGGGTTTCTCGGACAATGTTTCAGCACGGGCATTAATCATTTTAT 94609 | ||| || || ||| |||||||| | | |||||| |||||||| |||||||| |||| Sbjct 12751 CAGGCGTTTAAAGGCT-GGTTTCTCTGTGAGTGTTTCTGCACGGGCGTTAATCATCTTAT 12693 Query 94610 AGCCGATCTTTTCGTCTTTAGCCCATGGAGGGATAAGACCCCATC 94654 ||| || ||||| || || ||||| ||| | |||||||||| Sbjct 12692 TGCCTATTTTTTCATCCTTGGCCCAATTAGGAACTAGACCCCATC 12648 >seq97 Length=18159 Score = 100 bits (110), Expect = 2e-16 Identities = 196/290 (68%), Gaps = 0/290 (0%) Strand=Plus/Plus Query 123905 GATTGGATGAAGCTTAAAGAAGATGTAATGAAATATGGTCTTTATCATTCCTATAGACAA 123964 ||||||| |||||||| | || ||| || |||| || |||||| ||||| | Sbjct 16823 GATTGGAAACAGCTTAAATTTAAAGTGATGGAAAATGGCCTCTATCATGCCTATCGCATG 16882 Query 123965 GCTATTGCGCCTACGGGAAGCATCTCATATGTTCAATCATCTACAGCAGGTGTAATGCCA 124024 |||||||| || || | ||||||||| ||| | ||| | ||| | |||||||||| Sbjct 16883 GCTATTGCTCCAACAGCAAGCATCTCTTATATCCAAAATGCAACATCCAGTGTAATGCCC 16942 Query 124025 ATTATGGAGAGAATTGAGGAACGTACATACGGAAACAGTAAGACATATTATCCGATGCCA 124084 ||| | || ||||||| ||| || || | || | || |||||||||||||| Sbjct 16943 ATTGTAGAACAAATTGAGACACGAACCTATGCCAATTCAACCACGTATTATCCGATGCCC 17002 Query 124085 GGTTTATCGGCTCAGAATTGGTTCTTCTATAAGGAAGCATACGACATGGATATGTTTAAG 124144 |||| | ||| |||| || || ||| || | |||||| || ||| Sbjct 17003 TATTTACAAAAGGATAATGTCTTCTATTACAAATCAGCGTATCAGATGGATCAATTCAAG 17062 Query 124145 GTAGTTGATCTTATTGCAACAATTCAGCAGCACGTCGACCAAGGGATTTC 124194 ||| ||||| | ||||| ||||||| ||| || |||||||| || || Sbjct 17063 GTAATTGATTTGATTGCGGAGATTCAGCCGCATGTGGACCAAGGAATCTC 17112 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 430002951617426