Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236745.1_202017-07- 28] 658 sequences; 37,414,534 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq640 435 3e-117 seq144 185 8e-42 seq636 111 1e-19 seq476 86.0 6e-12 >seq640 Length=99942 Score = 435 bits (482), Expect = 3e-117 Identities = 1034/1547 (67%), Gaps = 40/1547 (3%) Strand=Plus/Plus Query 22452 GGTTCACCACTTGAAACTCGCCGGACAAGACGCGGCGTTGGTAAATGTTGGATGTGAACG 22511 |||| || || || |||||||| | ||| || || || |||||||||| |||| | | Sbjct 45135 GGTTGACGACCTGGAACTCGCCAGCCAACACACGACGAGAGTAAATGTTGCTTGTGTATG 45194 Query 22512 GTTCGAAAGATTCATTGTTTCCCAGTATCTGAGCGGTCGAAGCGGTCGGCATCGGCGCCA 22571 | ||||| | || || |||| ||||| | |||||| || || ||||||||||| | Sbjct 45195 GCTCGAAGCACTCGTTAAAGCCCATGATCTGCGAGGTCGAGGCTGTTGGCATCGGCGCAA 45254 Query 22572 ACAGTAGCGAGTTTCTCAAGCCGTGCTTTGAAATTTTACTCTTGAGCATCGACCAGTCCC 22631 || |||||||| | || ||||||| | || || | |||||| | |||||||| Sbjct 45255 CGAGAAGCGAGTTGCGCACACCGTGCTGGGCGATCTTGCCCTTGAGTGCGGCCCAGTCCC 45314 Query 22632 ACAGATCGGACGGCGTCACATTGTCCCACATATCGTATTGCAACACGCC--GCGACTCGC 22689 | || |||| || ||| ||| ||||||| ||||| || | | |||| |||| | Sbjct 45315 AGAGGTCGGTAGGAGTC---TTGCCCCACATGTCGTACTGGAGCTCGCCCTGCGATACT- 45370 Query 22690 CGGGCTGCCTTCGTACGTTTCGTACGGACCATATATCGCGGCAAGTTCGCAGCTCGCCTC 22749 || |||| ||| || ||||| ||||| || | ||||| ||||| ||||| Sbjct 45371 -GGAGAGCCTGGGTATGTCTCGTAAGGACCGAGCTTCTCAGCAAGCTCGCATGAAGCCTC 45429 Query 22750 CAACGCGCCGTAATATATAGTCTCGAAGATTTTCTTGTTCAATTCGGCGGC----GGCGA 22805 | || | | ||| || ||||| || || | | || | || ||| ||||| Sbjct 45430 AAGAGCAGCATGATAGATGGTCTCAAAAATCTGGATATTAAGCTCCTTGGCCTCAGGCGA 45489 Query 22806 CGCTTTCGTACGGCATACGCATCATCACGAACGCGTCCGCCATACCCTGAACGCCTATAC 22865 ||| | ||||| || | || ||| || || || | ||| | || || | || Sbjct 45490 G----TCGAATGGCATGCGGAGAGCCAAGAAGGCATCAGCAAGACCGTTGACACCAAGAC 45545 Query 22866 CGATCGGTCGGTTTTTCAGATTCGACACTTT--TGCCTCGGGCAAAGGATACCAATTCGA 22923 | || ||||||| | || | |||| |||||| || | || || | || Sbjct 45546 CAATGGGTCGGTGGCGGAAGTTG--CTCTTTCGTGCCTCTGGTACTGGGTAGTAGTTGAT 45603 Query 22924 ATCGATTGTTCTGTTCAAGTTTCTGGTCACAATTTTCGTTATNNNNNNNNNNNNNTCAAA 22983 ||||| || |||||| ||| | || || | ||| || | | || Sbjct 45604 CTCGATGGTCTTGTTCAGGTTACGTGTGACCACTTTGGTGACCTCGTGAAGTTTCTTGAA 45663 Query 22984 GTCGTAAACGCC-----CGATTGTACAACAAACTTGTTGACGGCGATCGAGGCAAGATTG 23038 ||| |||| | |||| || | || | || | || | ||| || |||||| Sbjct 45664 GTCAAAAACCTCGTTCTCGAT-GT-CGACGTAGGTGGGCAGAGCAAGCGAAGCCAGATTG 45721 Query 23039 CATACGGCCACCTCGTCTTTGGACGTGTACTCTACAATTTCGGTACATAGATTGCTACAC 23098 || || || ||||| ||| | | |||||| | || || || || | ||| | | Sbjct 45722 CAGACAGCGACCTCATCTGGAGCAGAGTACTCCATGATCTCAGTGCACAAATTAGAGCTC 45781 Query 23099 TTTATCGTGCCCAAATTGCTCTGGTTGCTTTTTCGATTGCACGAATCCTTGTAGAGCATG 23158 || || ||||| | ||| |||| ||||| || || ||| | |||||||| || ||| Sbjct 45782 TTGATGGTGCCAAGATTCTTCTGATTGCTCTTGCGGTTGGCGGCGTCCTTGTACAGAATG 45841 Query 23159 TACGGCGTGCCCGTCTCGACCTGCGACTCGATGATCGCTCGCCACATAGTCTGAGCGTGA 23218 | || ||||| |||||| ||||| ||||| || || ||| || ||||||| || Sbjct 45842 AAAGGTGTGCCGGTCTCGGTCTGCGCCTCGAGAATAGCATACCATATTTTCTGAGCACGA 45901 Query 23219 ACACGTCGCACGTACCT-GCCTTCTTCCTCGTACTTTTGGTACAACGCGTCAAATTCGGC 23277 || |||| |||| ||| ||||||| ||| || | ||||| | | | || ||| | Sbjct 45902 AC-CGTCTCACGGCCCTTGCCTTCTCTCTCATAACGCTCGTACAGCTCCTTGAACTCGTC 45960 Query 23278 ACCGTAACAGTCGGCCAGGCCGGGCGATTGCATCGGACACATGAGACTCCACATTGAGTC 23337 ||||||| || | ||| || || ||| | || ||||| ||| |||| | || Sbjct 45961 ACCGTAAACATCCGACAGACCAGGGCATTCGTTGGGGCACATCAGAGTCCAAGTGCCGTT 46020 Query 23338 ATTTTCAACGCGTCTCATAAAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGC 23397 | ||| || || |||||| ||||| || ||||| ||||||||||||| ||||| || Sbjct 46021 CTGTTCGACACGCTGCATAAAGAGATCGGGAATCCAGAGAGCGTAGAACAAATCGCGCGC 46080 Query 23398 GCGCACCTCCTCTTTGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATG 23457 || || || || || || |||||| | |||| || | || ||||| ||||| Sbjct 46081 ACGAACTTCTTCCTTTCCATGGTTCTTGCGAAGGTCCATGAACTGCATGACGTCTGCATG 46140 Query 23458 CCACGGCTCGAGGTAAACGGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTA 23517 ||||||||| ||||| | |||||| || || || | ||| ||||| ||||| || ||||| Sbjct 46141 CCACGGCTCAAGGTAGATGGCAAAAGCACCTGGACGCTTGTTGCCACCCTGGTCAACGTA 46200 Query 23518 ACGGGCCGTGTTGTTGTACACTCTTAGCATCGGCACGAGACCGTTGGACGCGCCGCCTAC 23577 ||| || |||||||| || |||| |||||| || || ||||||||||| | |||| | Sbjct 46201 ACGAGCAGTGTTGTTATAGACTCGTAGCATTGGTACAAGACCGTTGGATGTGCCGTTTGT 46260 Query 23578 GCCCGCCACACT-CGAACCTTTTGCTCGAACGTTGTGAACGTGGAAACCTATGCCTCCGC 23636 | |||||| | || ||| | || | | ||||||||| || | ||| || || || Sbjct 46261 G-CCGCCAATGTATGAGCCTGTGGCCCTGATGTTGTGAACATGAAGACCAATACCGCCAG 46319 Query 23637 CCGATTTCGATATCATCGCGCATTGTTTCAGAGTGTCGTAGATGCCCTCGATGCTGTCCT 23696 | || || ||||| || ||| || || || |||||||| || || |||||||| | Sbjct 46320 CGTTCTTGGAGATCATGGCACATATCTTGAGGGTATCGTAGATACCATCAATGCTGTCAT 46379 Query 23697 CTTTGGTCGCGACCAAGAAACACGAAGACATTTGCGCTTTGGGCGTAGCGGCCGAGAACA 23756 | || | || |||||||| || || | | ||||| | || ||| | || ||| | Sbjct 46380 CCTTCATGGCCACCAAGAAGCAGGATGCTAGCTGCGCCTGTGGGGTACCAGCACTGAAAA 46439 Query 23757 GTGTCGGGCTGGCGTGCGTAAAGTA-TCCATTCGACAT-TAGATTGTACGTGTCGATGGC 23814 |||| || || || || ||||| | || |||||| ||| ||||| || || || || Sbjct 46440 GTGTTGGCGAAGCATGTGTGAAGTACTTCA-ACGACATGTAG-TTGTATGTCTCAATCGC 46497 Query 23815 GGCATCAATGTCCTCTCCGTGTATACCGATGGCGACGCGCATCATCATGTATTGAGGTCT 23874 || |||||||| || || || || |||| || || ||||| ||||| | ||| ||||| Sbjct 46498 TGCTTCAATGTCTTCCCCATGAATGCCGACAGCCACACGCATGATCATCTGTTGCGGTCT 46557 Query 23875 CTCG---ACCGTGACGCCGTTAATTTTGAACAGATATGAACGTTGCATCGTTTTAAATCC 23931 |||| ||| | ||||| |||| ||| || ||||| || | || || || || || Sbjct 46558 CTCGGCAACCTT---GCCGTCAATTCTGAGAAGGTATGATCGCTCCAGAGTCTTGAAGCC 46614 Query 23932 AAAATAGTCATAGTTAAAGTCACGATCGTGCACTATGGCCGAATTCA 23978 || || | ||||| ||||| || || | || |||||||| |||| Sbjct 46615 GAAGTACTGGTAGTTGAAGTCGCGGTCATAGACAATGGCCGAGTTCA 46661 >seq144 Length=510160 Score = 185 bits (204), Expect = 8e-42 Identities = 561/858 (65%), Gaps = 23/858 (3%) Strand=Plus/Minus Query 57570 ATTTGGAACATGTACAAAAAGGCAGAAGCATCGTTTTGGACCGTCGAAGAAGTAGACCTG 57629 || ||| | |||||||||||||| || || || || ||||| | || || | || ||| Sbjct 267621 ATATGGCAAATGTACAAAAAGGCCGAGGCCTCATTCTGGACAGCTGAGGAGATTGATCTG 267562 Query 57630 TCTAAGGATCTGAGCGATTGGGATTCCC---TCAAAGAATCTGAGAGAAATTTTATTAAA 57686 || |||||||| ||| ||| | | |||| || || || || || | Sbjct 267561 TCGAAGGATCTCCACGACTGGAACAAGCGACTCAACGACGACGAACGATTCTTCATCTCA 267502 Query 57687 CACGTGTTGGCGTTTTTCGCCGCATCCGATGGTATTGTTAACGAGAATTTGGTCGAAAGA 57746 ||||| | || || ||||||||||||||||| ||||| |||||||| | ||||| | Sbjct 267501 CACGTCCTCGCATTCTTCGCCGCATCCGATGGCATTGTCAACGAGAACCTCGTCGAGCGC 267442 Query 57747 TTTTCACAAGAAGTGCAAGTGACGGAGGCGAGATGCTTTTACGGATTTCAAGTGGCCATT 57806 || || ||||| | ||||||| ||||||| ||||| || || | || Sbjct 267441 TTCAGCTCTGAGGTGCAGATCCCGGAGGCACGATGCTTCTACGGCTTCCAGATCATGATG 267382 Query 57807 GAAAACGTGCATTCAGAAATGTATTCGCTACTCATCGATACGTACGTGAAGGA--CAACG 57864 || ||| | || || || | ||||| || ||||||||||| ||| | | || ||| | Sbjct 267381 GAGAACATCCACTCCGAGACATATTCCCTTCTCATCGATACATACATCAGCGAGCCAAAG 267322 Query 57865 ACGAGAAACGTAGACTGTTCAACGCGATCGAAACAATGCCCGCGATCGCCAAGAAGGCAG 57924 | ||| | || |||||||| || ||||| | || || ||| || |||||| | Sbjct 267321 CAGCGAA-CATAC-CTGTTCAATGCCATCGACAACATCCCATGCATCCGCAGGAAGGCTG 267264 Query 57925 AGTGGTCAATCAAATGGATA----AAAAGCGCCACGGCCACGTTCGCCGAGAGGCTAATC 57980 | ||| | | |||||| | ||| | | || |||||| | || || Sbjct 267263 ACTGGGCGTTGCGATGGATTTCTGACAAGAACT----CGACATTCGCCCTCCGTCTCATT 267208 Query 57981 GCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTTTGCGGCAATATTTTGGATG 58040 || || |||||||| || ||||| ||||| || || ||||| || || || ||| || Sbjct 267207 GCATTTGCCGCCGTTGAGGGTATCTTCTTCTCTGGATCTTTTGCTGCTATCTTCTGGCTG 267148 Query 58041 AAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTGATATCGCGCGACGAG 58100 |||||||| || || ||| |||| || || || |||||| | || || || || ||| Sbjct 267147 AAGAAACGTGGTCTCATGGCCGGGCTCACATTCTCGAACGAGCTCATCTCCCGTGATGAG 267088 Query 58101 GGTCTCCATACTGATTTTGCGTGCCTAATGTACTCTCACATTGTCAATAAACCGACGCGG 58160 || | || || || || || ||||| ||| ||| || | || || |||| | | Sbjct 267087 GGCATGCACACAGACTTCGCCTGCCTTCTGTTCTCGCATCTGAAGAACAAGCCGAACCAG 267028 Query 58161 GATCGCATCTTGGACATTATCACCGAGGCGGTCGCGATCGAAAATGAGTTTGTCACCGAA 58220 | | | | ||| ||||||||||| ||| ||||||| | ||||| | || || Sbjct 267027 GCCCTTGTGCAGAGCATCATCACCGAGGCCGTCACGATCGAGCAGGAGTTCTTGACAGAC 266968 Query 58221 GCCCTACC--GGTGGCCATGCTCGGTATGAACAATGATTTGATGTCAAAGTACATTGAGT 58278 || || || | || | || || |||||| || | |||||| | |||||||| | Sbjct 266967 GCTCTTCCATGCAAGC--TTCTGGGGATGAACGCTGGCCTCATGTCACAATACATTGAAT 266910 Query 58279 TTGTTGCCGACAGACTTTTGCTCGAACT--GATTGGAGAGCGTCATTACAACACGAAAAA 58336 | || ||||| | || || | | ||| | ||| || |||||| | | || Sbjct 266909 TCGTCGCCGATCGCCTACTGTTAGCACTCGGCAACAAGAAGTTC--TACAACGCCACCAA 266852 Query 58337 TCCGTTTGATTTTATGAATCTGATCTCGCTCGAGGGCAAGACAAACTTTTTCGaaaaaaa 58396 || || || || ||| | || ||||| | |||||||| ||||| ||||| || Sbjct 266851 CCCCTTCGACTTCATGGAGAACATTTCGCTGGGCGGCAAGACCAACTTCTTCGAGAAGCG 266792 Query 58397 aGTTAGCGAATATCAAAA 58414 ||| |||| || || || Sbjct 266791 TGTTGGCGAGTACCAGAA 266774 >seq636 Length=763551 Score = 111 bits (122), Expect = 1e-19 Identities = 154/213 (72%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||||||||| ||||| || || ||||| || ||||| |||| || ||| | ||| Sbjct 54671 ATGCAAATTTTCGTCAAGACACTCACCGGCAAGACCATCACACTCGAAGTGGAATCATCC 54612 Query 31253 GACAGTGTCGAAACGGTCAA-ACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 |||| |||| | ||||| || || || |||||||| ||| | || || ||||| Sbjct 54611 GACACGATCGACAACGTCAAGTCAAAG-ATCCAAGACAAGGAGGGCATCCCACCGGACCA 54553 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 ||||||||| || ||||| ||||| ||| | || ||| ||| | ||||| || Sbjct 54552 GCAGCGTCTCATCTTCGCCGGCAAGCAGCTTGAGGACGGCCGGACACTTTCGGATTACAA 54493 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 ||| || || || || ||||| || |||| || Sbjct 54492 CATCCAGAAGGAGTCCACTCTGCACTTGGTGCT 54460 Score = 111 bits (122), Expect = 1e-19 Identities = 162/229 (71%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || ||||| |||||||| || ||||| || |||||| |||| || || | | Sbjct 54899 ATGCAGATCTTCGTCAAGACTCTCACCGGCAAGACCATCACCCTCGAGGTCGAGTCCAGC 54840 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| |||| | ||||| || || ||||||||| || | || || |||||| Sbjct 54839 GACACCATCGACAATGTCAAGTCGAAGATCCAGGACAAGGAGGGTATCCCACCTGACCAG 54780 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 ||||| || || || || ||||| ||| | || || | ||| || ||| || ||| Sbjct 54779 CAGCGCCTGATTTTTGCAGGCAAGCAGCTCGAGGATGGTCGTACTCTGTCCGACTACAAC 54720 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 || || |||||||||||||| || |||| ||| | || | || |||| Sbjct 54719 ATCCAGAAAGAATCGACTCTCCACTTGGTGCTTCGTCTCCGTGGTGGTA 54671 >seq476 Length=243870 Score = 86.0 bits (94), Expect = 6e-12 Identities = 110/149 (74%), Gaps = 6/149 (4%) Strand=Plus/Minus Query 31202 TTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCCGACAGTGTC 31261 ||||||||||| || || ||||| || ||||| |||| || || || ||||| || Sbjct 53996 TTCGTAAAGACCCTCACTGGCAAGACCATCACGCTCGAGGTCGAGTCGAGCGACACCATC 53937 Query 31262 GAAACGGTCAAACAGAG-AATAGC--GGACAAGGAAGGCGTGCCGCCCGACCAGCAGCGT 31318 || | ||||| ||| || | | ||||||||| || | || || |||||||||||| Sbjct 53936 GACAATGTCAA---GAGCAAGATCCAGGACAAGGAGGGAATCCCACCGGACCAGCAGCGT 53880 Query 31319 CTAATATTCGCTGGCAAACAGTTGGAAGA 31347 | || |||||||| || |||||||| || Sbjct 53879 TTGATCTTCGCTGGAAAGCAGTTGGAGGA 53851 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445762733571360