Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236745.1_202017-07- 28] 658 sequences; 37,414,534 total letters Query= NC_003157.5 Length=43106 Score E Sequences producing significant alignments: (Bits) Value seq104 116 1e-21 >seq104 Length=15669 Score = 116 bits (128), Expect = 1e-21 Identities = 214/314 (68%), Gaps = 0/314 (0%) Strand=Plus/Plus Query 917 TACTGGGATTCTTTTGATGCAGGAATTTACGTAGACGTTGTGACAGGAGAACCACTTTTC 976 ||||||||| | | |||| | ||||| || || || || || ||||| || ||||| Sbjct 1535 TACTGGGATACGTATGATCCGGGAATCTATGTGGATGTGAGCACCGGAGAGCCTCTTTTT 1594 Query 977 TCTTCAAAAGACAAATTTGAATCAGGTTGTGGTTGGCCAAGCTTTAGCCGCCCCATCAGC 1036 | | || |||| ||| || |||||||| ||||||||||||| ||| || ||| Sbjct 1595 GCCAGTGAGGATAAATATGATTCCGGTTGTGGCTGGCCAAGCTTTACCCGTCCAATCTTA 1654 Query 1037 CCAGACGTTGTCCGCTACAAGGAAGATAAGAGTTTCAATATGACGAGAACAGAAGTGCGC 1096 |||| ||||| ||| ||||||| | |||||| | |||||||| || Sbjct 1655 GCAGATGTTGTGACCTATCGAGAAGATACTTCCTATCATATGATCCGGACAGAAGTCCGG 1714 Query 1097 AGCCGTTCAGGGAATTCTCATCTGGGGCATGTCTTTACTGACGGACCTAAAGACCAAGGC 1156 || || |||||| || ||| || || ||||| ||| || || || ||| || || Sbjct 1715 AGTCGCTCAGGGGATATTCACCTTGGTCATGTTTTTGACGATGGGCCCGCAGATCACGGA 1774 Query 1157 GGCCTTCGTTACTGCATCAATAGCTTGTCTATTACCTTTATTCCAAAAGCTGATATGGAA 1216 ||| ||||||||||| || ||| || ||| ||| ||||| || || ||| || Sbjct 1775 GGCAAGCGTTACTGCATTAACAGCGCTTCGATTCACTTCATTCCTTTGGCGGAGATGCAA 1834 Query 1217 GCTAAGGGCTATGG 1230 || || ||||| || Sbjct 1835 GCAAAAGGCTACGG 1848 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 137816523127728