Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236745.1_202017-07-
28] 658 sequences; 37,414,534 total letters
Query= NC_004156.2
Length=231621
Score E
Sequences producing significant alignments: (Bits) Value
seq144 232 1e-55
seq640 165 1e-35
>seq144
Length=510160
Score = 232 bits (256), Expect = 1e-55
Identities = 579/864 (67%), Gaps = 33/864 (4%)
Strand=Plus/Minus
Query 125019 ATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTG 125078
|| ||| |||||||||||||||| ||||||| || ||||| | || ||| | ||||||
Sbjct 267621 ATATGGCAAATGTACAAAAAGGCCGAGGCCTCATTCTGGACAGCTGAGGAGATTGATCTG 267562
Query 125079 TCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAGAGTTTATATCG 125138
|| ||||| || |||| ||| | | || | | || || ||| || || ||
Sbjct 267561 TCGAAGGATCTCCACGACTGGAACAAGCGACTCAACGACGACGAACGATTCTTCATCTCA 267502
Query 125139 CACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCT-GTTGACACG 125197
||| | | || ||||| |||| |||||||| || |||||||| || || || || ||
Sbjct 267501 CACGTCCTCGCATTCTTCGCCGCATCCGATGGCATTGTCAACGAGAACCTCGTCGA-GCG 267443
Query 125198 ATTC-TCTCAAGAGTTGACCATTCCAGAGGTGTCGTGCTTTTACGGATTCCAAATCATGA 125256
||| ||| ||| || || || |||| ||||| ||||| ||||| |||||||
Sbjct 267442 CTTCAGCTC-TGAGGTGCAGATCCCGGAGGCACGATGCTTCTACGGCTTCCAGATCATGA 267384
Query 125257 TTGAGAACGTGCACTCGGAAATGTACTCTACACTGATTGACATGTACATTCGCGATCC-- 125314
| |||||| | ||||| || | || || || || || | ||||| |||| ||
Sbjct 267383 TGGAGAACATCCACTCCGAGACATATTCCCTTCTCATCGATACATACATCAGCGAGCCAA 267324
Query 125315 -GCAACGTAAACACATGCTCTTTAACGCAATCGACACGGTGCCGTCTATACGTAAAAAGG 125373
||| || |||| | || || || || ||||||| | || | || || | ||||
Sbjct 267323 AGCAGCG--AACATA-CCTGTTCAATGCCATCGACAACATCCCATGCATCCGCAGGAAGG 267267
Query 125374 CTCAATGGGTGATTCGGTGGATCGATGACGACAAGTCTTCGTACGCCGACAGACTGGTGG 125433
|| | |||| | | || ||||| |||| | || || | | |||| | | || | |
Sbjct 267266 CTGACTGGGCGTTGCGATGGATTTCTGACAAGAACTCGACATTCGCCCTCCGTCTCATTG 267207
Query 125434 CATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTTTGGCTCA 125493
|||| |||||||| ||||| |||||||| || || |||||| || ||||| ||||| |
Sbjct 267206 CATTTGCCGCCGTTGAGGGTATCTTCTTCTCTGGATCTTTTGCTGCTATCTTCTGGCTGA 267147
Query 125494 AGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGAGACGAGG 125553
|||| || || |||||| |||| || || | |||||| | || || || || ||||
Sbjct 267146 AGAAACGTGGTCTCATGGCCGGGCTCACATTCTCGAACGAGCTCATCTCCCGTGATGAGG 267087
Query 125554 GCCTACACTGTGACTTTGCCATTCTACTGTT-TCGCAACTATCTGCGTCCCGAGTGCAGA 125612
|| | ||| ||||| ||| || ||||| |||| ||||| | | || ||
Sbjct 267086 GCATGCACACAGACTTCGCCTGCCTTCTGTTCTCGC----ATCTGAAGAACAA--GCCGA 267033
Query 125613 TCCAG--CGATGAAAAGGTCATCAACATTGTAACCGATGCCGTGAGGATAGAACAAGAGT 125670
|||| | || || ||||| | ||||| ||||| | ||| || || ||||
Sbjct 267032 ACCAGGCCCTTGTGCAGAGCATCA------TCACCGAGGCCGTCACGATCGAGCAGGAGT 266979
Query 125671 TTCTAACCGAATCCCTACCGGTCAGCATGATTGGCATGAACTGCAAG-CTAATGTGCGAG 125729
| | || || | || || || | | || |||||| || | || |||| |
Sbjct 266978 TCTTGACAGACGCTCTTCCATGCAAGCTTCTGGGGATGAAC-GCTGGCCTCATGTCACAA 266920
Query 125730 TACATAGAGTTTGTGGCAGATCGTCTACTGTACGAGTTGATTGGCCGCAAGA---TTTAC 125786
||||| || || || || ||||| ||||||| | | ||| ||||| | |||
Sbjct 266919 TACATTGAATTCGTCGCCGATCGCCTACTGTTAG---CACTCGGCAACAAGAAGTTCTAC 266863
Query 125787 AACGCCAAGAATCCCTTTGATTTCATGACCAGCATATCACTAGAGGGTAAGACCAACTTT 125846
||||||| || ||||| || |||||| | ||| || || | || |||||||||||
Sbjct 266862 AACGCCACCAACCCCTTCGACTTCATGGAGAACATTTCGCTGGGCGGCAAGACCAACTTC 266803
Query 125847 TTCGAGAAGAAGGTCAGCGAGTAC 125870
||||||||| || ||||||||
Sbjct 266802 TTCGAGAAGCGTGTTGGCGAGTAC 266779
>seq640
Length=99942
Score = 165 bits (182), Expect = 1e-35
Identities = 382/568 (67%), Gaps = 6/568 (1%)
Strand=Plus/Minus
Query 96807 ACAAACGGCAACGCCAGTGGCCTAGTGCCAATGCTCAGAATGTACAATG-CAATGTCACG 96865
|||||||||| ||| || || || |||||||| || | || || || || | ||
Sbjct 46260 ACAAACGGCACATCCAACGGTCTTGTACCAATGCTACGAGTCTATAACAACACTG-CTCG 46202
Query 96866 ATACGTTACACAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTTG 96925
|||||| ||||| ||||| || || ||||| ||| | ||| ||||| | || || ||
Sbjct 46201 TTACGTTGACCAGGGTGGCAACAAGCGTCCAGGTGCTTTTGCCATCTACCTTGAGCCGTG 46142
Query 96926 GCACGCGGACGTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCACG 96985
||| || ||||| | | || || || | ||||| ||| ||| ||||| | ||
Sbjct 46141 GCATGCAGACGTCATGCAGTTCATGGACCTTCGCAAGAACCATGGAAAGGAAGAAGTTCG 46082
Query 96986 AGCCAGGGACTTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGTCAACGA 97045
|| | || ||||| || || |||||| | || ||| | || ||| |||| ||| | |
Sbjct 46081 TGCGCGCGATTTGTTCTACGCTCTCTGGATTCCCGATCTCTTTATGCAGCGTGTCGAACA 46022
Query 97046 CGGTGGCTACTGGAGCCTAATGTGCCCCGACTCGTCACCCGGTCTGTCCGATTGCTGGGG 97105
||| |||| || ||||||||| || | || |||||||| ||| | ||
Sbjct 46021 GAACGGCACTTGGACTCTGATGTGCCCCAACGAATGCCCTGGTCTGTCGGATGTTTACGG 45962
Query 97106 CGAAGAGTTTGAGGCCAAGTACACGGCCTACGAGCAAGAGGGCC-GATACGTGAGACGAG 97164
|| ||||| ||| |||| | || ||| ||| ||| | |||||||||
Sbjct 45961 TGACGAGTTCAAGGAGCTGTACGAGCGTTATGAGAGAGAAGGCAAGGGCCGTGAGACGGT 45902
Query 97165 TCGATGCACGAGAACTGTGGAAGGCCATCGTGACGGCTCAGGTAGAGACTGGAACTCCGT 97224
||| ||| | || | ||| | || || | ||| ||| ||||| || || || |
Sbjct 45901 TCG-TGCTCAGAAAATATGGTATGCTATTCTCGAGGCGCAGACCGAGACCGGCACACCTT 45843
Query 97225 ACATTCTCTACAAGGATACCGTGAATCGCAACAGCAACCA-ACGCCACTTGGGCACCATC 97283
|||||| |||||||| ||| || ||||| ||||| || | | ||||| |||||||
Sbjct 45842 TCATTCTGTACAAGGACGCCGCCAACCGCAAGAGCAATCAGAAGAATCTTGG-CACCATC 45784
Query 97284 AAGGGCTCCAATCTGTGCACGGAAATTGTAGAGTACGCCTCTCCGGACGAGACGGCAGTT 97343
||| |||| ||| ||||||| || || | |||||| | |||| || ||| || ||
Sbjct 45783 AAGAGCTCTAATTTGTGCACTGAGATCATGGAGTACTCTGCTCCAGATGAGGTCGCTGTC 45724
Query 97344 TGCGTTCTGGCATCGGTCAATCTGCCCA 97371
||| |||||| ||| | ||||||||
Sbjct 45723 TGCAATCTGGCTTCGCTTGCTCTGCCCA 45696
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 741053104788080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |