Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236745.1_202017-07- 28] 658 sequences; 37,414,534 total letters Query= NC_005839.2 Length=131680 Score E Sequences producing significant alignments: (Bits) Value seq636 93.3 4e-14 >seq636 Length=763551 Score = 93.3 bits (102), Expect = 4e-14 Identities = 151/213 (71%), Gaps = 6/213 (3%) Strand=Plus/Plus Query 48517 CACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGT-CGCTCGTCCT 48575 ||| || || || ||| |||||| || ||||||||||| | || ||| || |||||| Sbjct 54462 CACCAAGTGCAGAGTGGACTCCTTCTGGATGTTGTAATCCG-AAAGTGTCCGGCCGTCCT 54520 Query 48576 CCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCA 48635 | |||||||| ||| || | || | ||||||||| ||| || | | |||||||| Sbjct 54521 CAAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCCGGTGGGATGCCCTCCTTGTCTT 54580 Query 48636 TAATTTTCTGCTTGA--TAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGT 48693 || || ||||| | | || || || |||| || ||| |||| ||| ||||| Sbjct 54581 GGATCTTTGACTTGACGTTGTCG--ATCGTGTCGGATGATTCCACTTCGAGTGTGATGGT 54638 Query 48694 TTTACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726 || |||||||| || || || ||||| ||||| Sbjct 54639 CTTGCCGGTGAGTGTCTTGACGAAAATTTGCAT 54671 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421247821828658