Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236745.1_202017-07-
28] 658 sequences; 37,414,534 total letters
Query= NC_008291.1
Length=198050
Score E
Sequences producing significant alignments: (Bits) Value
seq640 185 1e-41
>seq640
Length=99942
Score = 185 bits (204), Expect = 1e-41
Identities = 637/981 (65%), Gaps = 32/981 (3%)
Strand=Plus/Plus
Query 62747 GCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCA 62806
|||| || |||||||| || || || ||||||| | | | | || | || ||||||
Sbjct 45704 GCAAGCGAAGCCAGATTGCAGACAGCGACCTCATCTGGAGCAGAGTACTCCATGATCTCA 45763
Query 62807 GTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACAC 62866
||||| | |||| | ||||||||| || | ||| | ||||| ||||| |||
Sbjct 45764 GTGCACAAATTAGAGCTCTTGATGGTGCCAAGATTCTTCTGATTGCTCTTGCGGTTGGCG 45823
Query 62867 GCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTC 62926
|| ||||| || |||||||| || || || || || |||| | || | ||| || | |
Sbjct 45824 GCGTCCTTGTACAGAATGAAAGGTGTGCCGGTCTCGGTCTGCGCCTCGAGAATAGCATAC 45883
Query 62927 CAGAC-----GA-CTCGAGCCTTTATTATAGATTTGTATCTCTT---TTCTCTTTCGTAT 62977
|| | || | ||| || | | | | | ||| |||||| || ||
Sbjct 45884 CATATTTTCTGAGCACGAACCGTC-TCACGG--------CCCTTGCCTTCTCTCTCATAA 45934
Query 62978 AGTGTATACAA-TCGTTCGAACTCGTCTCCCCAAACATTGTCCAGTCCAGGACATTCATC 63036
| |||| || || ||||||||| || |||||| ||| ||||| ||||| |
Sbjct 45935 CGCTCGTACAGCTCCTT-GAACTCGTCACCGTAAACATCCGACAGACCAGGGCATTCGTT 45993
Query 63037 CGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAAT 63096
|| ||||||| | ||| |||| | | || || | |||||||||||| |||||
Sbjct 45994 GGGGCACATCAGAGTCCAAGTGCCGTTCTGTTCGACACGCTGCATAAAGAGATCGGGAAT 46053
Query 63097 CCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAG 63156
||| ||||| || | ||| | | | | ||| || ||||| ||||| |||
Sbjct 46054 CCAGAGAGCGTAGAACAAATCGCGCGCACGAACTTCTTCCTTTCCATGGTTCTTGCGAAG 46113
Query 63157 ATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGG 63216
|| | |||| ||| | || | ||||||||| || | ||| ||||| | | | || ||
Sbjct 46114 GTCCATGAACTGCATGACGTCTGCATGCCACGGCTCAAGGTAGATGGCAAAAGCACCTGG 46173
Query 63217 CCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGG 63276
|| ||||| || ||||| || | ||| | ||| ||||| ||||| |||| | ||||||
Sbjct 46174 ACGCTTGTTGCCACCCTGGTCAACGTAACGAGCAGTGTTGTTATAGACTCGTAGCATTGG 46233
Query 63277 AATAATACCATTGGATGTACCATTGGTCCCTGAGATATAGCTTCCACTGGCACGAATATT 63336
| || ||| |||||||| || || || || || || || |||| | || ||
Sbjct 46234 TACAAGACCGTTGGATGTGCCGTTTGTGCCGCCAATGTATGAGCCTGTGGCCCTGATGTT 46293
Query 63337 ACTAA-TTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACG 63395
|| ||| ||||| || || || || | || ||||| | || ||| || | |
Sbjct 46294 GTGAACATGA-AGACCAATACCGCCAGCGTTCTTGGAGATCATGGCACATATCTTGAGGG 46352
Query 63396 TATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTT 63455
|||| ||||| || || || || |||||| ||||| | | || ||| || |
Sbjct 46353 TATCGTAGATACCATCAATGCTGTCATCCTTCATGGCCACCAAGAAGCAG---GATGCTA 46409
Query 63456 GGTGACGACT----AGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGAGTAAACCATTTT 63511
| || || || || || ||| | || | || || ||||| || || || | ||
Sbjct 46410 GCTG-CGCCTGTGGGGTACCAGCACTGAAAAGTGTTGGCGAAGCATGTGTGAAGTACTTC 46468
Query 63512 TCAGA-AAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTAC 63570
|| | |||| ||||| |||||||| |||| || || || |||||| || ||
Sbjct 46469 AACGACATGTAG-TTGTATGTCTCAATCGCTGCTTCAATGTCTTCCCCATGAATGCCGAC 46527
Query 63571 TGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAA 63630
|| |||||||| | ||| || || ||||| || | | |||| || ||| | | |
Sbjct 46528 AGCCACACGCATGATCATCTGTTGCGGTCTCTCGGCAACCTTGCCGTCAATTCTGAGAAG 46587
Query 63631 GTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAAT 63690
||| ||| |||| ||| || || || || || | ||| ||||| || || || |
Sbjct 46588 GTATGATCGCTCCAGAGTCTTGAAGCCGAAGTACTGGTAGTTGAAGTCGCGGTCATAGAC 46647
Query 63691 AATAACCGAGTTGAGTTTATC 63711
||| ||||||| || | |||
Sbjct 46648 AATGGCCGAGTTCAGCTCATC 46668
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 633626788376800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |