Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236745.1_202017-07- 28] 658 sequences; 37,414,534 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq144 288 2e-72 seq640 194 3e-44 seq554 87.8 3e-12 >seq144 Length=510160 Score = 288 bits (318), Expect = 2e-72 Identities = 579/848 (68%), Gaps = 22/848 (3%) Strand=Plus/Minus Query 42309 ATGTACAAGAAGGCGCAGTTCTCCAACTGGACCGCCGAGGAGATTGACCTGGCCAAGGA- 42367 |||||||| ||||| || ||| |||||| || ||||||||||| ||| | ||||| Sbjct 267612 ATGTACAAAAAGGCCGAGGCCTCATTCTGGACAGCTGAGGAGATTGATCTGTCGAAGGAT 267553 Query 42368 ---CACGGCCGGCT---GGGAGTCACTGTCTGAGAACGAAAAGTTTTTCCTCAAAAACAT 42421 |||| | || | || ||| | | |||||| || ||| || | || | Sbjct 267552 CTCCACGACTGGAACAAGCGACTCAACGACGACGAACGA----TTCTTCATCTCACACGT 267497 Query 42422 ACTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCAGGTTCAT 42481 || || ||||||||||| || || ||||| ||||| |||||||| | | | |||| Sbjct 267496 CCTCGCATTCTTCGCCGCATCCGATGGCATTGTCAACGAGAACCTCGTCGAGCGCTTCAG 267437 Query 42482 GAAAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCATAGAGAA 42541 ||||||||| | ||||| || |||||||||||||||||||| || ||||| Sbjct 267436 CTCTGAGGTGCAGATCCCGGAGGCACGATGCTTCTACGGCTTCCAGATCATGATGGAGAA 267377 Query 42542 CGTGCACTCTGAGGTGTACGCCAAACTGCTCAACACGTACATCCTGGATCCCGTCGAGCG 42601 | | ||||| ||| || || || || | || |||||| || || |||| Sbjct 267376 CATCCACTCCGAGACATATTCCCTTCTCATCGATACATACATCAGCGAGCCAAAGCAGCG 267317 Query 42602 TAACGGGCTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGGCGGACTGGGC 42661 | |||||||| ||||| || | || || |||||| | |||||| |||||||| Sbjct 267316 AACATACCTGTTCAATGCCATCGACAACATCCCATGCATCCGCAGGAAGGCTGACTGGGC 267257 Query 42662 GCTCAACTGGATCGAGAGTCCCGA-CGCAACGTTCGGCGAGAGGCTGGTAGCCTTTACCG 42720 | | ||||| | | || | | || |||| | | || | || ||| ||| Sbjct 267256 GTTGCGATGGATTTCT-GACAAGAACTCGACATTCGCCCTCCGTCTCATTGCATTTGCCG 267198 Query 42721 CCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAAGCAGAA-G 42779 |||| ||||| ||||||||||| || | || || | ||||||||||| ||| | | Sbjct 267197 CCGTTGAGGGTATCTTCTTCTCTGGATCTTTTGCTGCTATCTTCTGGCTGAAGAAACGTG 267138 Query 42780 GTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAGGGGCTGCAT 42839 || || ||| |||| ||||| ||||||||||| |||||| | | || ||||| |||| Sbjct 267137 GTCTC-ATGGCCGGGCTCACATTCTCGAACGAGCTCATCTCCCGTGATGAGGGCATGCAC 267079 Query 42840 AGGGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTCAGGCACAAGCCCTCGAAGGAGCGG 42899 | ||||| |||||||| ||||||||| || || | | ||||||| ||| | Sbjct 267078 ACAGACTTCGCCTGCCTTCTGTTCTCG---CATCTGAAGAACAAGCCGAACCAGGCCCTT 267022 Query 42900 GTCCGGGCCATCATCACGGAGGCCGTGGAGATCGAGAAGGAGTTCCTCACGCAGTCGCT- 42958 || | | ||||||||| |||||||| ||||||| |||||||| | | ||| |||| Sbjct 267021 GTGCAGAGCATCATCACCGAGGCCGTCACGATCGAGCAGGAGTTCTTGA--CAGACGCTC 266964 Query 42959 GCCCGTG-TCCCTGGTCGGCATGAACCACGACCTCATGTGCAAGTACATCCAGTACGTCG 43017 || || || | || |||||| | |||||||| | ||||| | | ||||| Sbjct 266963 TTCCATGCAAGCTTCTGGGGATGAACGCTGGCCTCATGTCACAATACATTGAATTCGTCG 266904 Query 43018 CCGACCATCTCCTGTGCCAGATGGGTCTCAGCCGCCTCTACAACACGCCGTGCCCCTTCG 43077 |||| | || |||| | || || |||||||| | | |||||||| Sbjct 266903 CCGATCGCCTACTGTTAGCACTCGGCAACAAGAAGTTCTACAACGCCACCAACCCCTTCG 266844 Query 43078 ACTTTATGGAGAACATCTCGTTGGAGGGCAAGACCAACTTTTTCGAGAAGCGCGTCGCCG 43137 |||| ||||||||||| ||| ||| |||||||||||||| ||||||||||| || | || Sbjct 266843 ACTTCATGGAGAACATTTCGCTGGGCGGCAAGACCAACTTCTTCGAGAAGCGTGTTGGCG 266784 Query 43138 ACTACCAG 43145 | |||||| Sbjct 266783 AGTACCAG 266776 >seq640 Length=99942 Score = 194 bits (214), Expect = 3e-44 Identities = 480/722 (66%), Gaps = 21/722 (3%) Strand=Plus/Plus Query 244688 GCCAGGTTGCAGACGGCCACCTCCTCCGAGTTGGTGTACTGGACAATCTCGGTGCAGAGG 244747 ||||| |||||||| || ||||| || | | ||||| | ||||| ||||| | Sbjct 45713 GCCAGATTGCAGACAGCGACCTCATCTGGAGCAGAGTACTCCATGATCTCAGTGCACAAA 45772 Query 244748 TTACTGCACTTGATGGTGCCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGCGTCCTTG 244807 ||| || |||||||||||| || | || |||||| |||| |||| |||||||||| Sbjct 45773 TTAGAGCTCTTGATGGTGCCAAGATTCTTCTGATTGCTCTTGCGGTTGGCGGCGTCCTTG 45832 Query 244808 TAGAGCATGAAGGGCCCCCCGGTCTCGAGCTGGGCGACGAGGACGCTGTTCCAGAGGTCC 244867 || || ||||| || ||||||||| ||| || |||| | | ||| | | | Sbjct 45833 TACAGAATGAAAGGTGTGCCGGTCTCGGTCTGCGCCTCGAGAATAGCATACCATATTTTC 45892 Query 244868 CTAGCCTTGACCGTCCTGCGAGCCTTGCCCTCTGCCTCGTAGCGGGTGTACAGGGCCTCG 244927 ||| |||||| || ||||||| ||| ||| || || |||||| ||| | Sbjct 45893 TGAGCACGAACCGTCTCACGGCCCTTGCCTTCTCTCTCATAACGCTCGTACAGCTCCTTG 45952 Query 244928 AACTCGGGGCCCCAGACCTCGTCTAGGCCGGGGCA--CGACGCCGGGCACATGAGACTCC 244985 |||||| || | || || || || ||||| || | |||||||| ||| ||| Sbjct 45953 AACTCGTCACCGTAAACATCCGACAGACCAGGGCATTCGTTG--GGGCACATCAGAGTCC 46010 Query 244986 ACTCGCCGCCGTCCTTGACCCTCTGCATGAAGAGGTCGGGGATCCAGAGGGCCTGGAAGA 245045 | |||| | | ||| | |||||| ||||| ||||| |||||||| || | ||| | Sbjct 46011 AAGTGCCGTTCTGTTCGACACGCTGCATAAAGAGATCGGGAATCCAGAGAGCGTAGAACA 46070 Query 245046 GGTCCCTGGTCCTCTGCTCGTCCGAGCCAGTGTTCTTCCTCAGCTCCAAAAAGTCAAAGA 245105 || | | | || ||| ||| |||||| | || |||| || | | || Sbjct 46071 AATCGCGCGCACGAACTTCTTCCTTTCCATGGTTCTTGCGAAGGTCCATGAACTGCATGA 46130 Query 245106 CGTCGACGTGCCAGGGCTCCATGTAGACAGCGAGGGCGCCGGGCCGCTTGTTGCCTCCCT 245165 |||| | ||||| ||||| | ||||| || | || || || ||||||||||| |||| Sbjct 46131 CGTCTGCATGCCACGGCTCAAGGTAGATGGCAAAAGCACCTGGACGCTTGTTGCCACCCT 46190 Query 245166 GGTCCACCATCCTCTCGAGC-GCGTTG---AAGATGCGCAGGGTAGGCACTATGCCGTTA 245221 ||| || | | ||||| | |||| ||| || || | || || | ||||| Sbjct 46191 GGT----CAACGTAACGAGCAGTGTTGTTATAGACTCGTAGCATTGGTACAAGACCGTTG 46246 Query 245222 GAGTGGCCGTTGGTGCCCTTGATGTAGGCGCCCTTGCCCCTGAGGTTGCTGATGGACATG 245281 || |||||| ||||| ||||| | ||| || |||||| |||| || ||||| Sbjct 46247 GATGTGCCGTTTGTGCCGCCAATGTATGAGCCTGTGGCCCTGATGTTG----TGAACATG 46302 Query 245282 ----CCTAGTCCGCCGGCGTGCTTGGAGATGAGGGCGCAGCTCTTGATGGTGTCTGCTAT 245337 || | ||||| |||| ||||||||| | ||| || |||||| ||| || || Sbjct 46303 AAGACCAATACCGCCAGCGTTCTTGGAGATCATGGCACATATCTTGAGGGTATCGTAGAT 46362 Query 245338 GCCCTCCATGCTGTCCGACTTCATGTTGAGCAGAAAGCAGGAGGACAGCTGGGGCT-TGG 245396 || || |||||||| ||||||| | || |||||||| | ||||| | || ||| Sbjct 46363 ACCATCAATGCTGTCATCCTTCATGGCCACCAAGAAGCAGGATGCTAGCTGCGCCTGTGG 46422 Query 245397 GG 245398 || Sbjct 46423 GG 46424 >seq554 Length=781042 Score = 87.8 bits (96), Expect = 3e-12 Identities = 100/131 (76%), Gaps = 4/131 (3%) Strand=Plus/Minus Query 242937 GAGCTGATGAGGTTCCCGGACAGGACCACTCCGATCGGACAGATGATCAACTCGTACCTG 242996 |||| ||||| |||||||||||||| || ||||||||||||||||||| || || Sbjct 61546 GAGCATATGAGATTCCCGGACAGGACGACAGTGATCGGACAGATGATCAACAGCTATCT- 61488 Query 242997 CTCAACAAG-AGCG-ATCTGGACGATCACGTCGTACACCTCCTGTTCTCGGCCAACCGAT 243054 ||| || | || | | || ||||||| | |||| || || |||||||| || |||| Sbjct 61487 -CCAAGGAGCATCGCAACAAGAAGATCACGCCATACATCTGCTTTTCTCGGCGAATCGAT 61429 Query 243055 GGGAAGCCGCC 243065 ||||||| ||| Sbjct 61428 GGGAAGCTGCC 61418 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944331432810080