Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236745.1_202017-07- 28] 658 sequences; 37,414,534 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq636 100 3e-16 seq476 84.2 2e-11 >seq636 Length=763551 Score = 100 bits (110), Expect = 3e-16 Identities = 163/230 (71%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 45114 CCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTG 45173 ||||| ||||| | || ||| | ||||| || || ||||| ||||| || ||||| | Sbjct 54445 CCTCCACGGAGACGCAGCACCAAGTGCAGAGTGGACTCCTTCTGGATGTTGTAATCC--G 54502 Query 45174 ACGGTTTTAGAA--TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCG 45231 | || | | || || | || || || ||| | || | || ||||||||||| | Sbjct 54503 AAAGTGTCCGGCCGTCCTCAAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCCGGTG 54562 Query 45232 GAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCG 45290 | ||||| || || ||||| || ||| |||| || | || | |||||||| || || Sbjct 54563 GGATGCCCTCCTTGTCTTGGATCTTTGACTTGA-CGTTGTCGATCGTGTCGGATGATTCC 54621 Query 45291 ACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 |||||||| || | || |||||||| || || || || ||||||||||| Sbjct 54622 ACTTCGAGTGTGATGGTCTTGCCGGTGAGTGTCTTGACGAAAATTTGCAT 54671 Score = 86.0 bits (94), Expect = 6e-12 Identities = 92/122 (75%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 45195 TGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATT 45254 || || |||||| | ||||| ||||||||||| || ||||||||||| ||||| || || Sbjct 54982 TGCTTGCCTGCGAAAATCAAGCGTTGCTGGTCAGGTGGAATGCCTTCCTTATCCTGGATC 55041 Query 45255 TTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCG 45314 || || | || | ||||||||| ||||| || ||||| |||| || |||||| Sbjct 55042 TTGCTCTTCACATTGTCGATGGTGTCGGACGACTCAACCTCGAGGGTAATGGTCTTGCCG 55101 Query 45315 GT 45316 || Sbjct 55102 GT 55103 >seq476 Length=243870 Score = 84.2 bits (92), Expect = 2e-11 Identities = 127/181 (70%), Gaps = 0/181 (0%) Strand=Plus/Plus Query 45151 CCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATA 45210 |||| ||||| || || ||| || ||| | ||| ||||| || ||||| ||| | | Sbjct 53816 CCTTCTGGATGTTGTAGTCGGAGAGGGTGCGACCATCCTCCAACTGCTTTCCAGCGAAGA 53875 Query 45211 TCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTT 45270 |||| || ||||||||||| || || || || || || || || || |||| | Sbjct 53876 TCAAACGCTGCTGGTCCGGTGGGATTCCCTCCTTGTCCTGGATCTTGCTCTTGACATTGT 53935 Query 45271 CTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAA 45330 | | ||||||| |||||||| ||||| || | || ||||| || || || ||||| | Sbjct 53936 CGATGGTGTCGCTCGACTCGACCTCGAGCGTGATGGTCTTGCCAGTGAGGGTCTTTACGA 53995 Query 45331 A 45331 | Sbjct 53996 A 53996 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 451999482273680