Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236745.1_202017-07-
28] 658 sequences; 37,414,534 total letters
Query= NC_013085.1
Length=194454
Score E
Sequences producing significant alignments: (Bits) Value
seq8 96.9 4e-15
seq629 84.2 3e-11
>seq8
Length=58653
Score = 96.9 bits (106), Expect = 4e-15
Identities = 117/156 (75%), Gaps = 9/156 (6%)
Strand=Plus/Minus
Query 31937 GGACTTGAACCTCCACGTCGCAAGGACACTGGAACCTAAACCCAGCGCGTCTACCAATTC 31996
||||||||||| ||||||| || ||| || || ||||| | || |||||| |||||||
Sbjct 27517 GGACTTGAACCCCCACGTC--AAAGACGCTAGATCCTAAGTCTAGTGCGTCTGCCAATTC 27460
Query 31997 CGCCATAC-CG-----ACTGGCGACTCAAGTAGGATTCGAACCTACGACCGACTGCTTAG 32050
||||| || || ||| || ||| | ||| |||||||| |||| ||| |||
Sbjct 27459 CGCCACACGCGCATATGATGGTGAGTCATGAAGGGCTCGAACCTTCGACACCCTGATTAA 27400
Query 32051 AAGGCAGTTGCTCTATCCAGCTGAGCTATTGAGTCA 32086
||| ||| ||||||| ||| |||||||| ||| |||
Sbjct 27399 AAGTCAGGTGCTCTA-CCAACTGAGCTAATGACTCA 27365
>seq629
Length=126711
Score = 84.2 bits (92), Expect = 3e-11
Identities = 58/66 (88%), Gaps = 0/66 (0%)
Strand=Plus/Minus
Query 32023 GGATTCGAACCTACGACCGACTGCTTAGAAGGCAGTTGCTCTATCCAGCTGAGCTATTGA 32082
||||||||||| |||||||| ||||||||| |||||||||||||||||||||| |||
Sbjct 52430 GGATTCGAACCCCCGACCGACGCCTTAGAAGGGCGTTGCTCTATCCAGCTGAGCTACTGA 52371
Query 32083 GTCATG 32088
| ||||
Sbjct 52370 GACATG 52365
Score = 84.2 bits (92), Expect = 3e-11
Identities = 57/64 (89%), Gaps = 0/64 (0%)
Strand=Plus/Plus
Query 32023 GGATTCGAACCTACGACCGACTGCTTAGAAGGCAGTTGCTCTATCCAGCTGAGCTATTGA 32082
||||||||||| |||||||| ||||||||||| |||||||||||| ||||||||| |||
Sbjct 60032 GGATTCGAACCCCCGACCGACGGCTTAGAAGGCCGTTGCTCTATCCTGCTGAGCTACTGA 60091
Query 32083 GTCA 32086
| ||
Sbjct 60092 GACA 60095
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 622119683023520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |