Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236745.1_202017-07-
28] 658 sequences; 37,414,534 total letters
Query= NC_015274.1
Length=56506
Score E
Sequences producing significant alignments: (Bits) Value
seq133 104 8e-18
>seq133
Length=520896
Score = 104 bits (114), Expect = 8e-18
Identities = 219/327 (67%), Gaps = 0/327 (0%)
Strand=Plus/Minus
Query 211 TGACTATAATCCAGACGTCCTTGAAACTTTCCCTAACAAACATCCTGAAAATAATTACCT 270
||| ||| |||||| | | | || | |||| |||||| || || | | |||| |
Sbjct 372759 TGAATATGATCCAGGCATTTTAGAGAATTTCGATAACAAGCACCCGTACCGTGATTATTT 372700
Query 271 AGTAACATTTGACGGATATGAATTCACTTCCCTTTGCCCTAAAACAGGACAGCCTGACTT 330
|| | ||| || | || ||||| || ||||| | || || ||||| |||||
Sbjct 372699 TGTCAAATTCAACTGCCCCGAGTTCACCAGTCTGTGCCCGATTACGGGTCAGCCAGACTT 372640
Query 331 CGCGAATGTTTTCATTAGTTACATTCCAAACGAAAAGATGGTTGAATCTAAATCATTGAA 390
|| | ||| ||||| ||||| || | | ||| ||||| || || || | ||
Sbjct 372639 TGCAACCATTTATATTAGCTACATCCCTGATGTAAAAATGGTAGAGAGCAAGTCTCTTAA 372580
Query 391 ATTGTACTTATTCAGTTTCCGTAACCACGGTGACTTCCACGAAGATTGCATGAACATTAT 450
||||| | ||||| ||||| ||||| || || |||||||| ||||| ||||||| ||
Sbjct 372579 GCTGTACCTGTTCAGCTTCCGCAACCATGGAGATTTCCACGAGGATTGTGTGAACATCAT 372520
Query 451 TTTGAATGACTTGTATGAATTGATGGAACCTAAGTACATTGAAGTCATGGGCCTATTCAC 510
|||| ||| || | | ||||||| || ||||||||||| |||| ||| ||
Sbjct 372519 CATGAACGACCTGATTAAGCTGATGGACCCGCGCTACATTGAAGTGTGGGGCAAATTTAC 372460
Query 511 TCCTCGTGGTGGAATTTCAATTTACCC 537
|| || || || || || || ||||
Sbjct 372459 GCCGCGCGGAGGCATCTCCATCGACCC 372433
Score = 84.2 bits (92), Expect = 8e-12
Identities = 99/134 (74%), Gaps = 0/134 (0%)
Strand=Plus/Minus
Query 1930 ATGCCTATCATGGAAATTTTCGGTCCTACAATTCAAGGTGAAGGAATGGTTATAGGTCAA 1989
|| ||| | ||||| || || || || || ||||||||||||| ||||| || || ||
Sbjct 373666 ATTCCTGTAATGGAGATCTTTGGCCCGACGGTTCAAGGTGAAGGTATGGTCATTGGGCAG 373607
Query 1990 AAGACTATTTTCATTCGAACTGGTGGATGCGACTATCATTGCAACTGGTGTGACTCAGCC 2049
|| || || ||| | || || | || ||||| |||| ||| |||||| ||||| |||
Sbjct 373606 AAAACGATGTTCGTCCGCACCGCGGGCTGCGATTATCGCTGCTCCTGGTGCGACTCTGCC 373547
Query 2050 TTTACCTGGAACGG 2063
|| || ||| ||||
Sbjct 373546 TTCACATGGGACGG 373533
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 180696188074128
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |