Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236745.1_202017-07- 28] 658 sequences; 37,414,534 total letters Query= NC_019406.1 Length=279967 Score E Sequences producing significant alignments: (Bits) Value seq21 87.8 3e-12 seq149 86.0 1e-11 >seq21 Length=50441 Score = 87.8 bits (96), Expect = 3e-12 Identities = 65/76 (86%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 132959 TGATGCGGGGTGGAGCAGTCCGGTAGCTCGTTTGGCTCATAACCAAAAGGTCGAGGGTTC 133018 ||| |||||||||||||| |||||||||||| ||||||||||| |||| || ||||| Sbjct 12756 TGACGCGGGGTGGAGCAGCCCGGTAGCTCGTCGGGCTCATAACCCGAAGGCCGCAGGTTC 12815 Query 133019 AAATCCCTCCCCCGCA 133034 |||||| |||||||| Sbjct 12816 AAATCCTGCCCCCGCA 12831 >seq149 Length=12003 Score = 86.0 bits (94), Expect = 1e-11 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 132963 GCGGGGTGGAGCAGTCCGGTAGCTCGTTTGGCTCATAACCAAAAGGTCGAGGGTTCAAAT 133022 |||||||||||||| |||||||||||| ||||||||||| |||| || ||||||||| Sbjct 12001 GCGGGGTGGAGCAGCCCGGTAGCTCGTCGGGCTCATAACCCGAAGGCCGCAGGTTCAAAT 11942 Query 133023 CCCTCCCCCGCA 133034 || |||||||| Sbjct 11941 CCTGCCCCCGCA 11930 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 895759032321360