Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236745.1_202017-07-
28] 658 sequences; 37,414,534 total letters
Query= NC_019487.1
Length=143986
Score E
Sequences producing significant alignments: (Bits) Value
seq655 143 2e-29
>seq655
Length=68225
Score = 143 bits (158), Expect = 2e-29
Identities = 157/209 (75%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 35541 CGGCGTAATTCCACATCCTTTAAATCGTTCTTATGAAGATTCGTCCTATGTAGTCGCATA 35600
||||| | || ||||||||| | |||| |||||| | ||| ||| |||| | |||||
Sbjct 50541 CGGCGCAGTTTCACATCCTTCAGGTCGTCCTTATGCAAATTGGTCATATGCACCCGCATG 50600
Query 35601 CCACACCCGATGTCACTTCCAACGATGGATGGTGAAATGAACCCATCTTTAGCATTCCAA 35660
||||| ||||||||||| || ||||||||||| || | || ||| || |||| |||
Sbjct 50601 CCACAGCCGATGTCACTGCCTACGATGGATGGAGATACAAATCCACTCTTGGCATCCCAT 50660
Query 35661 ACAGCAGTAGTCCCTATACAAGTACCTACTCCAACATGCGCGTCCGGCGTGTAGCTCATA 35720
|| ||||| || || || || |||||||| || |||||| | || |||||||| ||||||
Sbjct 50661 ACCGCAGTTGTGCCGATGCAGGTACCTACACCGACATGCACATCAGGCGTGTAACTCATA 50720
Query 35721 TGAACATTACGAGGTATTTGTAGGTTATT 35749
| | ||| || ||||| || || ||
Sbjct 50721 TAGGAAATACCCGGGATTTGAAGATTGTT 50749
Score = 122 bits (134), Expect = 8e-23
Identities = 374/567 (66%), Gaps = 11/567 (2%)
Strand=Plus/Plus
Query 34395 GCTCCTTTCACAACAACTAATGGTTTACAAACTGCTACTACTGAAGCAAGTTTCGCTCCT 34454
||||| |||||| | | | ||||||||| ||||| ||| ||| || || ||
Sbjct 49443 GCTCCCTTCACAGCGGCAAGTGGTTTACATTTGGCTACAACTTGAGCCAGACCTGCACCG 49502
Query 34455 ACTACAGAATCAATAATTTGGTCGACATCCTTGTAAGCTTGAGGACACTCATCTAAGATA 34514
||| ||| ||||||| ||||||| || || ||||| || | ||||||| ||
Sbjct 49503 GTCACACTATCCATAATTTCATCGACATTTTTATACGCTTGCGGCGATTCATCTATAATG 49562
Query 34515 GTCTCGAGAGACTTCTGGTTGACTACAATCTCATCGTCTTCTCCAACTCTCAAGCTCTTA 34574
| || || || |||||| || ||||||||||| || || || | || || | |
Sbjct 49563 GATTCAAGTGAACGCTGGTTCACCACAATCTCATCTTCAGTCCCCACGCCCA-GCGCCGA 49621
Query 34575 G-CAAACTCGTCAACCGTAACGAC-CTCTCTTGTAGCTCGACGACTACGAACACGACCAG 34632
| |||| || || || ||||| | | || |||| ||| ||| ||||| || || |
Sbjct 49622 GGCAAAATCCTCCACGGTAACCAGGCGCT-TTGTTGCTGTACGCGAACGAATGCGTCCTG 49680
Query 34633 CCCCATGACAGATAGAATAAAAGTTCTTTACACCCTCGTCTTTACCAAGCATAATGTAGC 34692
||||||||||||| |||||| | || | |||||| || || | ||| || ||
Sbjct 49681 CCCCATGACAGATTGAATAATAATTATCCTTCCCCTCGGGTTGGCCTACCATGATATATG 49740
Query 34693 TTGACGTCCCCATAGAGCCCGGAATAAGCGCCGGGTGTCCAGTTTCCTTAAACACCTTTG 34752
| |||||||| || || |||||||| || || || || ||| || | | ||| |
Sbjct 49741 AAGCAGTCCCCATTGAACCAGGAATAAGTGCGGGATGACCTGTTGCCAGATATGGCTTCG 49800
Query 34753 GGTTTAAATGGTGTCCAGCCGGAAGAGCTCTTGTAGCTCCTTTACGATGTACGATATGCG 34812
| || | || || || || | || | |||||||||||| || ||||| | | |
Sbjct 49801 GATTATCCGGATGACCTGCAGGCAATGCACGTGTAGCTCCTTTGCGGTGTAC-AAAAACC 49859
Query 34813 GAGAGTT--TC--TATGAAACTCGACTTGAGCATAGTTATGCATAAGATCATATAAAAGC 34868
|| || || || | || | |||||||| ||||| |||||||| | |
Sbjct 49860 GACCCTTGATCCGCGTGCGATTCCTCCCATGCATAGTTGTGCATCAGATCATA-GAGGGT 49918
Query 34869 TCAGTTTCCACATGTT-CACCCATAACATCCCGGAAAGCTTGGGATACACCATACGCAAT 34927
| | | | ||| || ||| | |||||||| ||||||| | | ||||||||||
Sbjct 49919 GCGGAATTCGCATTTTGGACCAAAGACATCCCGAAAAGCTTCGCGAATCGCATACGCAAT 49978
Query 34928 CATATGACGGTTCGCAACAGCGTAGTT 34954
|| ||| || ||||| || || || ||
Sbjct 49979 CAGATGGCGATTCGCTACGGCATAATT 50005
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 460623411341280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |