Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236745.1_202017-07- 28] 658 sequences; 37,414,534 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq640 237 3e-57 seq144 223 6e-53 >seq640 Length=99942 Score = 237 bits (262), Expect = 3e-57 Identities = 969/1508 (64%), Gaps = 47/1508 (3%) Strand=Plus/Plus Query 212696 GTTCAGGGACTGACTCTGGTCTATGAATGGGGCCCTGTCAGCGGCCATGTCTATGATATC 212755 ||||| | |||| |||||| || || | | | |||||| ||||| | | ||| | Sbjct 44923 GTTCAAGCTCTGAGACTGGTCGATAAAAGCACCACGGTCAGCAGCCATCTGCACGATGTT 44982 Query 212756 TCTCTGGGAGAGCTCCCACACGGTCTTGAAGATTTCTTTGAGGTCCTCTGGGAAGCCGGG 212815 | |||| || |||||| ||||||||| ||| | | |||||||| ||||| | | ||| Sbjct 44983 ACGCTGGCTGATCTCCCAGACGGTCTTGTAGAGTGCCTTGAGGTCGTCTGGAATGTTGGG 45042 Query 212816 GATGTTCTGCACAGACCCCCTGTGTATGGTCAGC--TGCAGGCG------CATGTCCTCG 212867 |||| ||| | || || || |||||| || | ||| ||||| ||| Sbjct 45043 GATGCGCTGAATGGAGCC-------ATTGTCAGCGATG-ATGCGGTTCTTCATGTTCTCT 45094 Query 212868 TTCCAGAGGCCCCTGGTCTCC-AGGCACTTGACCAGGTGAGGGTTGACTATCTGGAAGTC 212926 ||||||||| | |||| | || ||| | || |||||||| | |||||| || Sbjct 45095 GACCAGAGGCCAC-GGTCGACGAGATCCTTCAGAAGCCATGGGTTGACGACCTGGAACTC 45153 Query 212927 ACCTGAGAGCACCCTCCTCTGGTAAAAGTTTGAAGTGTAGGGCTCGATGCTCTCGTTGTT 212986 || | | ||| | | ||||| ||| ||||| ||||||| || |||||| Sbjct 45154 GCCAGCCAACACACGACGAGAGTAAATGTTGCTTGTGTATGGCTCGAAGCACTCGTTAAA 45213 Query 212987 CCCCAGAATCTGTGCAGTGCTGGCTGTGGGCATGGGAGCCACCAGGAGACTGTTCCTCAC 213046 |||| ||||| | || |||||| ||||| || || || || || ||| | ||| Sbjct 45214 GCCCATGATCTGCGAGGTCGAGGCTGTTGGCATCGGCGCAACGAGAAGCGAGTTGCGCAC 45273 Query 213047 TCCGTGCTCGCCGATGAGGCGCCGAAGCTCTGCCCAGTCCCATCTGCCAGACAGGTCCTC 213106 ||||||| | |||| || | || | ||||||||||| | | | ||| Sbjct 45274 ACCGTGCTGGGCGATCTTGCCCTTGAGTGCGGCCCAGTCCCAGAGGTCGGT-AGGA---- 45328 Query 213107 GTCCTTCACGTTCCACATGTCAAACTGCAAGATGCCTTTGCTCACGGGGCTGCCCTGGTA 213166 ||| | | | |||||||| |||| | ||| | || || ||| |||| Sbjct 45329 GTCTTGCCC----CACATGTCGTACTGGAGCTCGCCCTGCGATACTGGAGAGCCTGGGTA 45384 Query 213167 AGAGGAGTAGGGGCCATGCTCCTTGGCCAGCTCGCAGGACGCCTGCAGGGCAGCGTAGTA 213226 | ||| || || ||| || || |||||||| || |||| || ||||| | || Sbjct 45385 TGTCTCGTAAGGACCGAGCTTCTCAGCAAGCTCGCATGAAGCCTCAAGAGCAGCATGATA 45444 Query 213227 GATGGTTTCAAATATCTCCCTGTTGAGCTTCTTGGCCTCTGGGGACGTGAAGGGCATCAT 213286 |||||| ||||| |||| | || |||| ||||||||| || || ||| ||||| Sbjct 45445 GATGGTCTCAAAAATCTGGATATTAAGCTCCTTGGCCTCAGGCGAGTCGAATGGCATGCG 45504 Query 213287 CATGCGTTGGAACACATCAGCCAGCCCCTGGACCCCGATGCCGATGGGTCTGTGTCTCAG 213346 | ||| ||||||| || || | ||| || | || ||||||| ||| | | Sbjct 45505 GAGAGCCAAGAAGGCATCAGCAAGACCGTTGACACCAAGACCAATGGGTCGGTGGCGGAA 45564 Query 213347 GTTAGACTTG-GAGCACTCCTCCAAGGGGTAAAAGTTGCAGTCGATGATCTTGTTGAGGT 213405 ||| ||| | || ||| | ||||| ||||| |||||| ||||||| |||| Sbjct 45565 GTTGCTCTTTCGTGC-CTCTGGTACTGGGTAGTAGTTGATCTCGATGGTCTTGTTCAGGT 45623 Query 213406 TGCGGGTGGCCACTTTGGTGACATGGGCCAGGTACTCGTGATTGAACACGTAGCCCCCGT 213465 | || ||| ||||||||||||| | | || | || | | || || | | | || Sbjct 45624 TACGTGTGACCACTTTGGTGACCTCGTGAAGTTTCTTGAAGTCAAAAACCTCGTTCTCGA 45683 Query 213466 CCTGCACAAACTCAGGCAGGGCGATGCTGGCCAGGTTGCAAACGGCCACCTC--CTGAGA 213523 | || | ||||| || | ||||| ||||| || || ||||| ||| || Sbjct 45684 TGTCGACGTAGGTGGGCAGAGCAAGCGAAGCCAGATTGCAGACAGCGACCTCATCTG-GA 45742 Query 213524 GTCTGTGTACTCCATGATCTCGGTGCACAGGTTGCTGCATCGGATGGTGCCCAGGTTCTG 213583 | | | ||||||||||||||| ||||||| || || ||||||||| || |||| Sbjct 45743 G-CAGAGTACTCCATGATCTCAGTGCACAAATTAGAGCTCTTGATGGTGCCAAGATTCTT 45801 Query 213584 GTGGTTTGACTTTGCGTTGGCAGAATCCTTGTAGAGCATGTAGGGGGACCCGGTCTCTAG 213643 || || ||| |||||| | |||||||| || ||| | || | |||||||| Sbjct 45802 CTGATTGCTCTTGCGGTTGGCGGCGTCCTTGTACAGAATGAAAGGTGTGCCGGTCTCGGT 45861 Query 213644 CTGGGACACCAGTATCTGGCTCCAGAGGTACCTGGCCTTGACCACCCGCCTGACAGCTCC 213703 ||| | | | || || ||| | | | || || | ||| || || || | Sbjct 45862 CTGCGCCTCGAGAATAGCATACCATATTTTCTGAGC----ACGAACCGTCTCACGGCCCT 45917 Query 213704 GGGCGTAGC-CTCGTACTGTTCGTAGAGCTCGTTGAATTCGTGGCCCCAGACCCTGTCCA 213762 | | | | ||| || | ||||| ||||| ||||| |||| || | || || Sbjct 45918 TGCCTTCTCTCTCATAACGCTCGTACAGCTCCTTGAACTCGTCACCGTAAACATCCGACA 45977 Query 213763 GTCCCGGACAGGATGCGGGACACATGAGGCTCCAGTCCCCGTCATCTCTGACTCTCTGCA 213822 | || || || ||| ||||| || |||| |||| | | ||| | ||||| Sbjct 45978 GACCAGGGCATTCGTTGGGGCACATCAGAGTCCAAGTGCCGTTCTGTTCGACACGCTGCA 46037 Query 213823 TGAACAGGTCCGGGACCCACAGCGCGGTGAACAGGTCCCTGGTCCTCCTCTCGTCCACTC 213882 | || || || || | ||| || ||| ||||| || | | | || ||| || Sbjct 46038 TAAAGAGATCGGGAATCCAGAGAGCGTAGAACAAATCGCGCGCACGAACTTCTTCCTTTC 46097 Query 213883 CAGAGTTTTTGCGCAGATCTAGAAAGTCAAAGATGTCCGCGTGCCACGGCTCCATGTAGA 213942 || ||| ||||| || || | || | | || ||| || ||||||||||| | ||||| Sbjct 46098 CATGGTTCTTGCGAAGGTCCATGAACTGCATGACGTCTGCATGCCACGGCTCAAGGTAGA 46157 Query 213943 TGGCAAAGGCGCCCGGCCTCTTG---CCGCCCTGGTCCACCAGCCTGGCCACCATGTTGA 213999 ||||||| || || || | |||| || |||||||| || | || |||| Sbjct 46158 TGGCAAAAGCACCTGGACGCTTGTTGCCACCCTGGTCAACGTAACGAGCAGTGTTGTTAT 46217 Query 214000 AGATGCGCAGGACGGGTACCAGCCCGTTGGACTGT-CCGTTGGTTCCCGCTATATACGAG 214058 ||| || || | ||||| || |||||||| ||| ||||| || || | || || ||| Sbjct 46218 AGACTCGTAGCATTGGTACAAGACCGTTGGA-TGTGCCGTTTGTGCCGCCAATGTATGAG 46276 Query 214059 CCGGAGGCCCTCAGGTTGCT--CATGGAGAGCCCTATGCCACCGGCGTACTTGGAGATCA 214116 || | |||||| | |||| |||| ||| || || || || |||| ||||||||||| Sbjct 46277 CCTGTGGCCCTGATGTTGTGAACATGAAGA--CCAATACCGCCAGCGTTCTTGGAGATCA 46334 Query 214117 TGGCGCAGCGCCTCACAGTCTCCATGATGCCGGCCATGCTGTCATCTGTGAGGTTCAGCA 214176 |||| || | | | || || ||| || | ||||||||||| | | | || || Sbjct 46335 TGGCACATATCTTGAGGGTATCGTAGATACCATCAATGCTGTCATCCTTCATGGCCACCA 46394 Query 214177 AGAAGCAG 214184 |||||||| Sbjct 46395 AGAAGCAG 46402 >seq144 Length=510160 Score = 223 bits (246), Expect = 6e-53 Identities = 563/851 (66%), Gaps = 10/851 (1%) Strand=Plus/Plus Query 47839 CTGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTC 47898 |||||| || || || | ||||| |||||||| ||||| || ||| ||| |||||||| Sbjct 266776 CTGGTACTCGCCAACACGCTTCTCGAAGAAGTTGGTCTTGCCGCCCAGCGAAATGTTCTC 266835 Query 47899 CATGAAGAGGAAGGGGTTGGGTGTGTTATACACC--CGTGTCAGGCCCATCTGTTCCAGC 47956 ||||||| ||||||||||| | ||| || | | | ||| ||| | | ||| Sbjct 266836 CATGAAGTCGAAGGGGTTGGTGGCGTTGTAGAACTTCTTGTT--GCCGAGTGCTAACAGT 266893 Query 47957 AGGTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATGAGG 48016 ||| |||| |||||| | || ||||||| |||||||||| |||||| || | || Sbjct 266894 AGGCGATCGGCGACGAATTCAATGTATTGTGACATGAGGCCAGCGTTCATCCCCAGAAGC 266953 Query 48017 GACACGGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACAATC 48076 || | ||| | ||| | ||||||| ||| ||| ||||| || | || Sbjct 266954 TTGCATGGAAGAGCGTCTGTCAAGAACTCCTGCTCGATCGTGACGGCCTCGGTGATGATG 267013 Query 48077 TGCTTAACGCGGGACTCTGAGGGTTTGTTGCGCAGGTGCTTGGCATAGAGCATGCAGGCA 48136 || || ||| || || ||||| ||| ||| | | || | |||||| Sbjct 267014 CTCTGCACAAGGGCCTGGTTCGGCTTGTTCTTCAGATGCGAGA---ACAGAAGGCAGGCG 267070 Query 48137 AAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCAGGC 48196 ||||| |||||| ||| || || ||| ||||||| |||| ||||| ||| || | | Sbjct 267071 AAGTCTGTGTGCATGCCCTCATCACGGGAGATGAGCTCGTTCGAGAATGTGAGCCCGGCC 267130 Query 48197 ATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATGCCC 48256 |||| || | | || |||||||| || || || ||||| |||||||||||||| ||| Sbjct 267131 ATGAGACCACGTTTCTTCAGCCAGAAGATAGCAGCAAAAGATCCAGAGAAGAAGATACCC 267190 Query 48257 TCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAGATCCAG 48316 || || || || || || |||| | |||| | | ||||||||| || ||||| Sbjct 267191 TCAACGGCGGCAAATGCAATGAGACGGAGGGCGAATGTCGAGTTCTTGTCAGAAATCCAT 267250 Query 48317 GAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGCCCGGAAGAGC 48376 | ||||||||| |||||| | ||||||||| || | || ||||| ||| || Sbjct 267251 CGCAACGCCCAGTCAGCCTTCCTGCGGATGCATGGGATGTTGTCGATGGCATTGAACAGG 267310 Query 48377 TTCTTGCACTCACCTGCGTCCGCAACATAGGTAGTGAGCAGCTTTGCGTACATCTCAGAG 48436 | | | || || || | || ||| || || | || |||| ||| Sbjct 267311 TATGTTCGCTGCTTTGGCTCGCTGATGTATGTATCGATGAGAAGGGAATATGTCTCGGAG 267370 Query 48437 TGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCAAACACCTGCACT 48496 || | ||||| || ||||||||| ||||||||| | ||||| | |||||| Sbjct 267371 TGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCATCGTGCCTCCGGGATCTGCACC 267430 Query 48497 TCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGAAGCAGCAAAGAAG 48556 || | | ||| | ||| | || ||||| ||||| || ||||| || || || ||||| Sbjct 267431 TCAGAGCTGAAGCGCTCGACGAGGTTCTCGTTGACAATGCCATCGGATGCGGCGAAGAAT 267490 Query 48557 GCAAGGACATGTTTAAGGAAATGGCGCTCGTTGTGGGTGAG-AGC--ATTCCAGCCCTGT 48613 || ||||| ||| | ||| || |||| || | |||| || |||||| | || Sbjct 267491 GCGAGGACGTGTGAGATGAAGAATCGTTCGTCGTCGTTGAGTCGCTTGTTCCAGTCGTGG 267550 Query 48614 ACGTCTTTGCCCAGGTCCACTTCTTCCACAGTCCAGAAGGACGCGAGTGCTTTTTTGTAC 48673 | || || ||| || | || || | |||||||| || || || ||||||||| Sbjct 267551 AGATCCTTCGACAGATCAATCTCCTCAGCTGTCCAGAATGAGGCCTCGGCCTTTTTGTAC 267610 Query 48674 ATGCCCCATAT 48684 || |||||| Sbjct 267611 ATTTGCCATAT 267621 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931525138142720