Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236745.1_202017-07-
28] 658 sequences; 37,414,534 total letters
Query= NC_019544.1
Length=49335
Score E
Sequences producing significant alignments: (Bits) Value
seq185 264 4e-66
seq276 87.8 6e-13
>seq185
Length=9056
Score = 264 bits (292), Expect = 4e-66
Identities = 509/748 (68%), Gaps = 2/748 (0%)
Strand=Plus/Minus
Query 45438 TGAAACAATATCTAGACTTGCTGCAAGACATCTTAGAAAACGGCGTGGAGAAAGAAGATC 45497
|||| | ||||| || || | || || ||| | || ||||||||| | || | ||| |
Sbjct 6105 TGAAGAACTATCTTGATTTATTACAGGATATCCTGGATAACGGCGTGCATAAGGGAGACC 6046
Query 45498 GGACGGGAACAGGCACATTGTCGGTGTTCGGCCGTCAGCTGCGCTTTAACTTGCAGGACG 45557
| || ||||| || || || || || ||| | ||||| || | | || | || |
Sbjct 6045 GCACCGGAACGGGAACCCAATCTGTTTTTGGCAGACAGCTCCGATATGACCTATCCGAAG 5986
Query 45558 GATTCCCGCTCGTGACGACGAAAAAGTTGCATATCCGCTCGATCATTTATGAACTGCTCT 45617
| |||||||| || || || || | ||| | || ||||| |||| || | |
Sbjct 5985 GGTTCCCGCTTGTAACAACCAAGCGAATCCATCTGAAATCAGTCATTCATGAGTTGTTAT 5926
Query 45618 GGTTTTTAAAAGGCGATACGAATGTTCGCTATTTGCAGGAGAATGGTGTGACGATTTGGG 45677
||||||| | || ||||||||| | |||| || |||| ||||| |||| ||| ||||
Sbjct 5925 GGTTTTTGAGCGGGGATACGAATATATCCTATCTGAAGGAAAATGGCGTGAAGATCTGGG 5866
Query 45678 ACGAGTGGGCCGATGAAAACGGCGATCTCGGCCCAATCTACGGCGCGCAATGGCGGTCGT 45737
| || ||||| || ||||| || ||| | || || | ||||| | |||||||| | |
Sbjct 5865 ATGATTGGGCTGACGAAAATGGTGATTTGGGTCCGGTATACGGATCTCAATGGCGCACTT 5806
Query 45738 GGAAAGGGGCTGACGGGAAAACGGTCGACCAAATTGCGGCGGTCTTTAAGGAAATCAAGC 45797
|| ||| | | || | | | | || || ||||| || || || | ||| ||
Sbjct 5805 GGGAAGCACCCAATGGAGAGAAGATTGATCAGATTGCAGCTGTAATTGATTCAATTAAAA 5746
Query 45798 GCAACCCGAACTCGCGGCGGTTGCTTGTGAGCGCGTGGAACGTGGCAAAGTTGGGGGAAA 45857
||| ||| | || || || || || ||||| ||||| ||||| || | | |
Sbjct 5745 ACAATCCGGATTCACGACGTCACCTCGTTAGCGCCTGGAATGTGGCGGAGATTAACAACA 5686
Query 45858 TGAAGTTGCCCCCATGTCATTACGCCTTTCAGTTTTACGTCGCGAATGGCCGGTTGTCAT 45917
|||| ||||||| || |||| ||| |||||||||||||| || | || | ||||
Sbjct 5685 TGAAACTGCCCCCTTGCCATTTCGCGTTTCAGTTTTACGTGGCTGAGGGTAAACTATCAT 5626
Query 45918 GCATG-TGGCAACAGCGTTCTGTCGATACATTTCTAGGATTGCCGTTTAACATCGCTAGC 45976
| ||| | ||| |||||| || ||||| || || || |||| |||||||| || |||
Sbjct 5625 GTATGCTCACAAT-GCGTTCCGTGGATACGTTCCTGGGGCTGCCATTTAACATTGCCAGC 5567
Query 45977 TATGCGCTGTTGACACATATGGTTGCCCAACAATGCGACCTCGATGTCGGCGAACTCATT 46036
||||| |||||||||||||| ||||||| || || || || || || || || ||||
Sbjct 5566 TATGCATTGTTGACACATATGATTGCCCAGCAGTGTGATCTTGAAGTGGGAGAGTTCATC 5507
Query 46037 TTCACCGGCGGCGACGTCCATTTGTACAAAAATCATCTGGAACAAGCGAAACTGCAGCTG 46096
| |||| || || || || | ||| ||| ||| ||||||||| |||| ||| ||
Sbjct 5506 TGGTCCGGTGGGGATGTACACATCTACTCAAACCATGTGGAACAAGTGAAAACCCAGTTG 5447
Query 46097 ACGCGCGAGCCGCGCCCGCTGCCGAAGCTCGTGATCAAACGGAAGCCGCCGTCTATCTTT 46156
||| || || | | |||| || || || ||||| || |||||| || || |||
Sbjct 5446 GAGCGTGAACCATACGCATTGCCTAAACTGGTCATCAAGCGTAAGCCGGATTCCATTTTT 5387
Query 46157 GACTATGAATACGAGGATTTTGAATTTG 46184
|| ||| | || |||||||| ||||
Sbjct 5386 GATTATACGTTTGAAGATTTTGAGTTTG 5359
>seq276
Length=393910
Score = 87.8 bits (96), Expect = 6e-13
Identities = 141/203 (69%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 35790 GTCCCGATCATTGTCCTGGCACAACTGAACCGGGCAGTGGAGCAAAGGGCGGACAAACGC 35849
|| ||| | |||| | || | || |||| ||||| || |||||| | ||| |||||
Sbjct 339867 GTTCCGGTTATTGCCTTGTCTCAGCTGAGCCGGGGTGTAGAGCAACGTCAGGATAAACGT 339808
Query 35850 CCGACGATGGCAGACCTTCGAGAGTCGGGAAGCATCGAGCAAATTGCTGATTTGATTGCC 35909
|||| |||| ||| | || || |||||| ||||||||| |||||| | | ||
Sbjct 339807 CCGATGATGAGTGACTTGCGGGAATCGGGATCGATCGAGCAAGATGCTGACATCGTAGCG 339748
Query 35910 TTCCTGTACCGCGAGGACTATTACAATCGGGACGCTGAACAAACAGGAATCACAGAAATT 35969
||||||||||| || ||||| || || | ||| | || | | | || | || |||
Sbjct 339747 TTCCTGTACCGGGATGACTACTATAACCAGGAGACCGAGAAGAAAAACATTATCGAGATT 339688
Query 35970 ATTGTTGCCAAAAACCGTAACGG 35992
||| | |||||| | ||||| ||
Sbjct 339687 ATTATCGCCAAACAGCGTAATGG 339665
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 157749167377812
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |