Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236745.1_202017-07-
28] 658 sequences; 37,414,534 total letters
Query= NC_019929.1
Length=243050
Score E
Sequences producing significant alignments: (Bits) Value
seq185 93.3 7e-14
>seq185
Length=9056
Score = 93.3 bits (102), Expect = 7e-14
Identities = 161/234 (69%), Gaps = 0/234 (0%)
Strand=Plus/Minus
Query 123106 GTTCCTAGGCGTACCGTTTAACATTGCCTCTTACGCGCTCCTGATACACATGTTTGCCCA 123165
|||||| || | || |||||||||||| || || | ||| ||| ||| |||||||
Sbjct 5597 GTTCCTGGGGCTGCCATTTAACATTGCCAGCTATGCATTGTTGACACATATGATTGCCCA 5538
Query 123166 GCAGGCCAATATGGCAGTAGGTGACTTCGTGTGGACGGGTGGGGATGTGCATCTGTACTC 123225
|||| || | | ||| || || ||| | ||| | ||||||||||| || | |||||
Sbjct 5537 GCAGTGTGATCTTGAAGTGGGAGAGTTCATCTGGTCCGGTGGGGATGTACACATCTACTC 5478
Query 123226 CAACCACCTGGAGCAGGCAGATTTGCAGTTAACTCGCGAACCTCATCCGTTACCACAACT 123285
||||| |||| || | | ||||| || ||||| | | || || ||||
Sbjct 5477 AAACCATGTGGAACAAGTGAAAACCCAGTTGGAGCGTGAACCATACGCATTGCCTAAACT 5418
Query 123286 GCGGATTAAACGTCGTCCGGATTCTATCTTCGACTATAAGTTTGAAGATTTCGA 123339
| || || ||| |||||||| || || || |||| |||||||||||| ||
Sbjct 5417 GGTCATCAAGCGTAAGCCGGATTCCATTTTTGATTATACGTTTGAAGATTTTGA 5364
Score = 86.0 bits (94), Expect = 1e-11
Identities = 163/240 (68%), Gaps = 0/240 (0%)
Strand=Plus/Minus
Query 122419 AGACCGTACGGGCACGGGCACCCTGTCGTTATTCGGCGCACAAATGCGCTTTGACCTGCA 122478
|||||| || || ||||| |||| || | || ||| ||| | || | ||||||
Sbjct 6050 AGACCGCACCGGAACGGGAACCCAATCTGTTTTTGGCAGACAGCTCCGATATGACCTATC 5991
Query 122479 AAAAGGTTTCCCGCTGGTCACGACCAAAAAGGTTCACCTCCGCTCCATCATCCATGAGCT 122538
|||| |||||||| || || ||||| | || || || |||| |||||| |
Sbjct 5990 CGAAGGGTTCCCGCTTGTAACAACCAAGCGAATCCATCTGAAATCAGTCATTCATGAGTT 5931
Query 122539 TCTGTGGTTCCTCATGGGCGATACCAACATCCAGTATCTGAAAGACAACAACGTCAGTAT 122598
| ||||| | | || ||||| || || |||||||| || || ||| | ||
Sbjct 5930 GTTATGGTTTTTGAGCGGGGATACGAATATATCCTATCTGAAGGAAAATGGCGTGAAGAT 5871
Query 122599 CTGGGATGAATGGGCAGATGAAGATGGTAATCTCGGCCCGGTGTACGGTAAGCAATGGCG 122658
||||||||| ||||| || ||| ||||| || | || ||||| ||||| ||||||||
Sbjct 5870 CTGGGATGATTGGGCTGACGAAAATGGTGATTTGGGTCCGGTATACGGATCTCAATGGCG 5811
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 777625603976800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |