Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236745.1_202017-07- 28] 658 sequences; 37,414,534 total letters Query= NC_019929.1 Length=243050 Score E Sequences producing significant alignments: (Bits) Value seq185 93.3 7e-14 >seq185 Length=9056 Score = 93.3 bits (102), Expect = 7e-14 Identities = 161/234 (69%), Gaps = 0/234 (0%) Strand=Plus/Minus Query 123106 GTTCCTAGGCGTACCGTTTAACATTGCCTCTTACGCGCTCCTGATACACATGTTTGCCCA 123165 |||||| || | || |||||||||||| || || | ||| ||| ||| ||||||| Sbjct 5597 GTTCCTGGGGCTGCCATTTAACATTGCCAGCTATGCATTGTTGACACATATGATTGCCCA 5538 Query 123166 GCAGGCCAATATGGCAGTAGGTGACTTCGTGTGGACGGGTGGGGATGTGCATCTGTACTC 123225 |||| || | | ||| || || ||| | ||| | ||||||||||| || | ||||| Sbjct 5537 GCAGTGTGATCTTGAAGTGGGAGAGTTCATCTGGTCCGGTGGGGATGTACACATCTACTC 5478 Query 123226 CAACCACCTGGAGCAGGCAGATTTGCAGTTAACTCGCGAACCTCATCCGTTACCACAACT 123285 ||||| |||| || | | ||||| || ||||| | | || || |||| Sbjct 5477 AAACCATGTGGAACAAGTGAAAACCCAGTTGGAGCGTGAACCATACGCATTGCCTAAACT 5418 Query 123286 GCGGATTAAACGTCGTCCGGATTCTATCTTCGACTATAAGTTTGAAGATTTCGA 123339 | || || ||| |||||||| || || || |||| |||||||||||| || Sbjct 5417 GGTCATCAAGCGTAAGCCGGATTCCATTTTTGATTATACGTTTGAAGATTTTGA 5364 Score = 86.0 bits (94), Expect = 1e-11 Identities = 163/240 (68%), Gaps = 0/240 (0%) Strand=Plus/Minus Query 122419 AGACCGTACGGGCACGGGCACCCTGTCGTTATTCGGCGCACAAATGCGCTTTGACCTGCA 122478 |||||| || || ||||| |||| || | || ||| ||| | || | |||||| Sbjct 6050 AGACCGCACCGGAACGGGAACCCAATCTGTTTTTGGCAGACAGCTCCGATATGACCTATC 5991 Query 122479 AAAAGGTTTCCCGCTGGTCACGACCAAAAAGGTTCACCTCCGCTCCATCATCCATGAGCT 122538 |||| |||||||| || || ||||| | || || || |||| |||||| | Sbjct 5990 CGAAGGGTTCCCGCTTGTAACAACCAAGCGAATCCATCTGAAATCAGTCATTCATGAGTT 5931 Query 122539 TCTGTGGTTCCTCATGGGCGATACCAACATCCAGTATCTGAAAGACAACAACGTCAGTAT 122598 | ||||| | | || ||||| || || |||||||| || || ||| | || Sbjct 5930 GTTATGGTTTTTGAGCGGGGATACGAATATATCCTATCTGAAGGAAAATGGCGTGAAGAT 5871 Query 122599 CTGGGATGAATGGGCAGATGAAGATGGTAATCTCGGCCCGGTGTACGGTAAGCAATGGCG 122658 ||||||||| ||||| || ||| ||||| || | || ||||| ||||| |||||||| Sbjct 5870 CTGGGATGATTGGGCTGACGAAAATGGTGATTTGGGTCCGGTATACGGATCTCAATGGCG 5811 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 777625603976800