Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236745.1_202017-07-
28] 658 sequences; 37,414,534 total letters
Query= NC_020852.1
Length=186468
Score E
Sequences producing significant alignments: (Bits) Value
seq640 214 2e-50
seq144 91.5 2e-13
seq653 84.2 3e-11
>seq640
Length=99942
Score = 214 bits (236), Expect = 2e-50
Identities = 890/1385 (64%), Gaps = 31/1385 (2%)
Strand=Plus/Minus
Query 75221 ATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGTCTTGGAGACA 75280
||| ||||||| || || ||||||| || |||||||||||||| | | | ||||||
Sbjct 46545 ATGATCATGCGTGTGGCTGTCGGCATTCATGGGGAAGACATTGAAGCAGCGATTGAGACA 46486
Query 75281 TACGACAAGATGTCCCA-AGGTATGTTCATTCACGCAACACCAACCCTCTTCAATGCTGG 75339
||| || | ||||| | ||| |||| || || | ||||| || |||| ||||||
Sbjct 46485 TACAACTACATGTCGTTGAAGTAC-TTCACACATGCTTCGCCAACACTTTTCAGTGCTGG 46427
Query 75340 TACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGACTCAATCAA 75399
||| ||| ||||| | | |||||| | | |||| ||||| ||| || |
Sbjct 46426 TACCCCACAGGCGCAGCTAGCATCCTGCTTCTTGGTGGCCATGAAGGATGACAGCATTGA 46367
Query 75400 CGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGGGGGTATTGG 75459
|||||||| | || || | | ||||| ||||| ||| ||||| ||||||||
Sbjct 46366 TGGTATCTACGATACCCTCAAGATATGTGCCATGATCTCCAAGAACGCTGGCGGTATTGG 46307
Query 75460 GATGCACATCCATGATGTGAGAGCCAATAAATCTCGTA--TTCGGGGGACAAATGGTCAA 75517
| || | || | | || |||| | ||| || || | || ||||| || |
Sbjct 46306 TCTTCATGTTCACAACATCAGGGCCAC--AGGCTCATACATTGGCGGCACAAACGGCACA 46249
Query 75518 TCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGTAAATCAA 75577
|| | ||| || | |||||||| || || | |||| ||| || || || || | ||
Sbjct 46248 TCCAACGGTCTTGTACCAATGCTACGAGTCTATAACAACACTGCTCGTTACGTTGACCAG 46189
Query 75578 GCGGG------GCGTCGCAAGGGGTCCATCGCGGTCTACTTGGAACCATGGCATGCCGAT 75631
| || ||||| ||| | | | || ||||| | || || |||||||| ||
Sbjct 46188 GGTGGCAACAAGCGTCC--AGGTG-CTTTTGCCATCTACCTTGAGCCGTGGCATGCAGAC 46132
Query 75632 ATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCTCGGTGTAGAGAT 75691
||||| ||||| | || | || ||||| || | ||||| | ||| | |||
Sbjct 46131 GTCATGCAGTTCATGGACCTTCGCAAGAACCATGGAAAGGAAGAAGTTCGTGCGCGCGAT 46072
Query 75692 CTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGGAGGGTGGTCAA 75751
| || | | || |||||||| || || || ||| |||| || || || ||
Sbjct 46071 TTGTTCTACGCTCTCTGGATTCCCGATCTCTTTATGCAGCGTGTCGAACAGAACGGCACT 46012
Query 75752 TGGTCTCTTTTCTGTCCAGAC-AAGGCACCAGGTCTCTCCGACGCGGTGGGTGAGGAGTT 75810
||| |||| | || || || || || || ||||| || || | ||||| |||||
Sbjct 46011 TGGACTCTGATGTGCCCCAACGAATGC-CCTGGTCTGTCGGATGTTTACGGTGACGAGTT 45953
Query 75811 TGAAGCCCTCTACACAAAGTATGA-AGAGGAGGGTAGAGCCAATGCGACTGTACCAGCCG 75869
| | || ||| ||||| |||| ||| || ||| || ||| || | ||
Sbjct 45952 CAAGGAGCTGTACGAGCGTTATGAGAGAGAAGGCAAGGGCCG-TGAGACGGTTCGTGCTC 45894
Query 75870 CCGATGTTTGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCATATATGCTTT 75929
| | ||| | ||||||||| | | ||||| ||||| || ||||| | || || |
Sbjct 45893 AGAAAATATGGTATGCTATTCTCGAGGCGCAGACCGAGACCGGCACACCTTTCATTCTGT 45834
Query 75930 ACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCAAGAGCTCAA 75989
||||||| || ||| ||||| || || |||||| | || || ||||||||||| |
Sbjct 45833 ACAAGGACGCCGCCAACCGCAAGAGCAATCAGAAGAATCTTGGCACCATCAAGAGCTCTA 45774
Query 75990 ATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTGTTTGCAATTTGG 76049
|| | ||||| || || | |||||| | | | |||||| ||||| |||||| |||
Sbjct 45773 ATTTGTGCACTGAGATCATGGAGTACTCTGCTCCAGATGAGGTCGCTGTCTGCAATCTGG 45714
Query 76050 CATCAATCGCCCTTCCAAAGTATGTCAATGAAGAGACTCGCACTTTTGATTATGAAAAAC 76109
| || | || || || | || ||| | |||| |||||| | | ||||
Sbjct 45713 CTTCGCTTGCTCTGCCCACCTACGTCGACATCGAGAACGAGGTTTTTGACTTCAAGAAAC 45654
Query 76110 TTCATGAAATCACAAAGATTGTTACCAAAAATCTAAACCGAGTCATTGACAGAAATTTTT 76169
|||| || |||| || | || || || || ||| ||| || | || | |
Sbjct 45653 TTCACGAGGTCACCAAAGTGGTCACACGTAACCTGAACAAGACCATCGAGATCAACTACT 45594
Query 76170 ATCCCGT-TGAGACTGCGCGAAAGTCTAATATGCGACACAGACCTATTGGTTTGGGTGTT 76228
| || || ||| || |||||| || | || ||| |||| |||||| | |||||
Sbjct 45593 ACCCAGTACCAGA-GGCACGAAAGAGCAACTTCCGCCACCGACCCATTGGTCTTGGTGTC 45535
Query 76229 CAAGGTCTCGCGGATGTATTTATTTTGTGCCGCTACGCATTTGATTCAGATGAAGCCAAG 76288
| ||||| || |||| || | |||| |||| || || ||| ||||||
Sbjct 45534 AACGGTCTTGCTGATGCCTTCTTGGCTCTCCGCATGCCATTCGACTCGCCTGAGGCCAAG 45475
Query 76289 GAGATGAATGCTCGTATCTTTGAAACCATGTATCACGCATCCCTGGAGGCGAGTTGTGAA 76348
||| | ||| | || ||||| ||||| ||||| || | || ||||| || ||
Sbjct 45474 GAGCTTAATATCCAGATTTTTGAGACCATCTATCATGCTGCTCTTGAGGCTTCATGCGAG 45415
Query 76349 TTGGCT--GAAGCCCAAGGTTCCTATGAGACATTTGAGGGTTCTCCCGCGTCCCAAGGGG 76406
| ||| ||||| | ||| | || ||||||| || ||||| | || || || |
Sbjct 45414 CTTGCTGAGAAGCTC--GGTCCTTACGAGACATACCCAGGCTCTCCAGTATCGCAGGGCG 45357
Query 76407 TGCTTCAGTTTGATATGTGGG--AAG-GTGAAACCAAGCTCAACTACGACTGGGATGTTC 76463
||| |||| || ||||||| ||| | ||| | || || ||||||| | |
Sbjct 45356 AGCTCCAGTACGACATGTGGGGCAAGACTCCTACCGACCT---CTGGGACTGGGCCGCAC 45300
Query 76464 TCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGATGGCACCAATGCCAA 76523
|||||| ||| || | ||| | || ||| ||| | | || || |||||||
Sbjct 45299 TCAAGGGCAAGATCGCCCAGCACGGTGTGCGCAACTCGCTTCTCGTTGCGCCGATGCCAA 45240
Query 76524 CAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCATACACAACAAACA 76583
||||||| ||| | || ||| |||| ||| || ||||| || |||||||||| ||||
Sbjct 45239 CAGCCTCGACCTCGCAGATCATGGGCTTTAACGAGTGCTTCGAGCCATACACAAGCAACA 45180
Query 76584 TCTAC 76588
| |||
Sbjct 45179 TTTAC 45175
>seq144
Length=510160
Score = 91.5 bits (100), Expect = 2e-13
Identities = 325/501 (65%), Gaps = 18/501 (4%)
Strand=Plus/Minus
Query 65025 GAAGGCGAAATGGGCAATGAAATGG-TTTGACACAAAGTCTCGCTCCTTCGCCGAGCGCC 65083
|||||| | ||||| || |||| ||| |||| |||| | |||||| || |
Sbjct 267271 GAAGGCTGACTGGGCGTTGCGATGGATTTCTGACAAGAACTCGA-CATTCGCCCTCCGTC 267213
Query 65084 TTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTCATTCTGC-GCTATTTAT 65142
| |||| ||||| || ||||||||||||||||| || || || ||| ||||| |
Sbjct 267212 TCATTGCATTTGCCGCCGTTGAGGGTATCTTCTTCTCTGGATC-TTTTGCTGCTATCTTC 267154
Query 65143 TGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAATGAACTTATTTCCCGA 65202
||| ||||||| || ||||||||| | || || ||||| || || || || |||||
Sbjct 267153 TGGCTGAAGAAACGTGGTCTCATGGCCGGGCTCACATTCTCGAACGAGCTCATCTCCCGT 267094
Query 65203 GATGAGGGTCTCCACCAGGAGTTTGCCGTGGAGCTCTTCAAGACTTTGCGTAATAGACCC 65262
|||||||| | ||| || || ||| || ||| | | || || | ||
Sbjct 267093 GATGAGGGCATGCACACAGACTTCGCCTGCCTTCTGTTCTCGCATCTGAAGAACAAGCCG 267034
Query 65263 ACTACC--GAAACTATCCACGCCATCGTGAAAGAGGCGGTTGAGATTGAGAAAGGGTTCA 65320
| ||| | | | || |||| | | ||||| || ||| ||| | | ||||
Sbjct 267033 A--ACCAGGCCCTTGTGCAGAGCATCATCACCGAGGCCGTCACGATCGAGCAGGAGTTCT 266976
Query 65321 TCTTGGACGCACTCCCATGTAATCTCATCGGTATGAACTCTGAGAAGATGTCCGAGTACA 65380
| ||||| || ||||| || || | || |||||| ||| ||||| | ||||
Sbjct 266975 TGACAGACGCTCTTCCATGCAAGCTTCTGGGGATGAACGCTGGCCTCATGTCACAATACA 266916
Query 65381 TTGAGTATGTGTCGGATCGTCTCCTCAAACAAGTTGGGGTGCCACCCA-----TTTGGAA 65435
|||| | || | ||||| || || | | | || || | | | | ||
Sbjct 266915 TTGAATTCGTCGCCGATCGCCTACTGTTAGCACTCGG-----CAACAAGAAGTTCTACAA 266861
Query 65436 CGCGAAGAATCCATTTGACTTTATGGAAAACATTAGCCTTGATGGGAAGACCAACTTCTT 65495
||| | || || || ||||| ||||| |||||| || | || ||||||||||||||
Sbjct 266860 CGCCACCAACCCCTTCGACTTCATGGAGAACATTTCGCTGGGCGGCAAGACCAACTTCTT 266801
Query 65496 TGAGAAGCGAGTTGGGGACTA 65516
|||||||| ||||| || ||
Sbjct 266800 CGAGAAGCGTGTTGGCGAGTA 266780
>seq653
Length=68970
Score = 84.2 bits (92), Expect = 3e-11
Identities = 339/528 (64%), Gaps = 12/528 (2%)
Strand=Plus/Minus
Query 175315 CCAGGTACGGGAAAGACCCTCCTCGCCCGAGCCATCGCGGGTGAATCAAATGTCCCATTC 175374
|| ||||| || || ||| | ||||| || || | || ||||| | ||| ||||||
Sbjct 21349 CCGGGTACAGGTAAAACCTTGCTCGCTCGTGCTGTTGCCGGTGAGGCGGGTGTACCATTC 21290
Query 175375 ATC--CAGTGCTCTGCCGCAAACTTTGTGGAGATGTTTGTTGGTGTGGGTGCCAAAAGGG 175432
|| || | || | | |||| || || |||||||| ||||| ||||| | |
Sbjct 21289 TTCAGCATT--TCCGGTTCTGACTTCGTTGAAATGTTTGTCGGTGTCGGTGCATCTCGTG 21232
Query 175433 TTCGCGATCTCTTTGAAATCGCCCGCGAAAATCAACCATGTATTGTCTTCATTGATGAGA 175492
| || || | ||||||| || |||| |||||||| |||| || ||||| |
Sbjct 21231 TACGTGACTTGTTTGAAAATGCGAAGAAAAACGCCCCATGTATCATCTTTATCGATGAAA 21172
Query 175493 TTGATGCGGTGGGCAAGCAACGCAGCGCTGGTGGTATGCCAGCAAATGACGAGAGAGAAC 175552
|||||||||| || || || | |||||| | | | ||||| | ||||
Sbjct 21171 TTGATGCGGTAGGACGTCAGCGTGGTGCTGGTCTTGGTGGTGGTCACGACGAACGTGAAC 21112
Query 175553 AAACAATTAATCAACTACTCACCGAGATGGATGGCTT---TGACAATGAGACTGGCATTG 175609
||||| | || || | ||| || |||||||| || | |||||| || |||
Sbjct 21111 AAACACTCAACCAGTTGCTCGTTGAAATGGATGGTTTCGGAGCCAATGA---AGGTATTA 21055
Query 175610 TGGTTATTGCGGCCACTAATCGCGTGGATATCCTTGATGACGCCCTCCTTCGCCCGGGTC 175669
| | |||| || || || || | || || || || ||| | || || || || |
Sbjct 21054 TCATCGTTGCAGCTACGAACCGTGCAGACATTCTGGACCCTGCCTTGCTGCGTCCAGGAC 20995
Query 175670 GTTTTGATCGCAAGATCCAAGTGGGTCTTCCAAGTGTGCGAGGTCGCAAGAAGATTTTGG 175729
||||||| || | || |||| || || ||| ||||||| | | || ||
Sbjct 20994 GTTTTGACCGTCAAATTACGGTGGATCGCCCTGACGTGAGAGGTCGTGAAGCGGTTCTGA 20935
Query 175730 GAGTCCATGCCCGAGACAAG-AAGTTATCTGAAGATGTCAGTCTCGCGAGTATTGCCAAG 175788
||| || | || ||||| | ||| | ||||||| | || | | ||||| |||
Sbjct 20934 AAGTACACTCACGCAACAAGCCACTTA-CCAAAGATGTGAAGCTGGACATCATTGCGAAG 20876
Query 175789 CAAACAACTGGATTCTCTGGTGCGGAGTTGGCAAACCTTCTCAATGAA 175836
| || || |||||||| ||||| || |||| ||| || || ||||||
Sbjct 20875 CGTACTACGGGATTCTCCGGTGCAGATTTGGAAAATCTCCTGAATGAA 20828
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 596564693215040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |