Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236745.1_202017-07- 28] 658 sequences; 37,414,534 total letters Query= NC_021536.1 Length=171797 Score E Sequences producing significant alignments: (Bits) Value seq8 87.8 2e-12 seq29 84.2 2e-11 >seq8 Length=58653 Score = 87.8 bits (96), Expect = 2e-12 Identities = 66/78 (85%), Gaps = 0/78 (0%) Strand=Plus/Plus Query 148130 ACGGGGTGTAGCTTAGCTTGGTAGAGCGCCCGCTTTGGGAGCGGGAGGTCGCAGGTTCAA 148189 ||||| ||||||| ||||||||||||| || | ||||||| | || ||||||| |||||| Sbjct 27796 ACGGGATGTAGCTCAGCTTGGTAGAGCACCTGGTTTGGGACCAGGGGGTCGCATGTTCAA 27855 Query 148190 ATCCTGCCACCCCGATTT 148207 ||| || || |||||||| Sbjct 27856 ATCGTGTCATCCCGATTT 27873 >seq29 Length=43460 Score = 84.2 bits (92), Expect = 2e-11 Identities = 64/76 (84%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 148130 ACGGGGTGTAGCTTAGCTTGGTAGAGCGCCCGCTTTGGGAGCGGGAGGTCGCAGGTTCAA 148189 ||||| ||||||| ||||||||||||| || | ||||||| | || ||||||| |||||| Sbjct 83 ACGGGATGTAGCTCAGCTTGGTAGAGCACCTGGTTTGGGACCAGGGGGTCGCATGTTCAA 142 Query 148190 ATCCTGCCACCCCGAT 148205 ||| || || |||||| Sbjct 143 ATCGTGTCATCCCGAT 158 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 549617879355760