Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236745.1_202017-07-
28] 658 sequences; 37,414,534 total letters
Query= NC_022646.1
Length=101818
Score E
Sequences producing significant alignments: (Bits) Value
seq376 116 2e-21
seq476 113 3e-20
seq636 102 5e-17
>seq376
Length=291155
Score = 116 bits (128), Expect = 2e-21
Identities = 97/119 (82%), Gaps = 0/119 (0%)
Strand=Plus/Plus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
||||| ||||| | ||||||||||||||||||||| ||||| || ||| |||| ||||
Sbjct 11893 AGGACGAGGTGGAGGGTGCTCTCCTTCTGAATGTTGTAGTCGGAGAGGGTGCGGCCATCC 11952
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884
|| || ||||| ||||||||||||| || |||||||| | || | |||||||||||
Sbjct 11953 TCGAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCCGGTGGAATTCCCTCCTTGTC 12011
>seq476
Length=243870
Score = 113 bits (124), Expect = 3e-20
Identities = 145/198 (73%), Gaps = 8/198 (4%)
Strand=Plus/Plus
Query 34782 TGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGG 34841
||| | ||||||| ||||| ||||| || ||| |||| |||| |||| |||||||| |
Sbjct 53810 TGCACACCTTCTGGATGTTGTAGTCGGAGAGGGTGCGACCATCCTCCAACTGCTTTCCAG 53869
Query 34842 CGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGA 34901
||||||||| || |||||||| | || | ||||||||||| | || || ||||
Sbjct 53870 CGAAGATCAAACGCTGCTGGTCCGGTGGGATTCCCTCCTTGTCCTGGATCTTGCTCTTGA 53929
Query 34902 CGGATGCTATCGAT----TCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGG 34957
| || | ||||| || | | |||||| || | || |||||||| || ||||||
Sbjct 53930 C--AT--TGTCGATGGTGTCGCTCGACTCGACCTCGAGCGTGATGGTCTTGCCAGTGAGG 53985
Query 34958 GTCTTTACAAAGATCTGC 34975
|||||||| ||| | |||
Sbjct 53986 GTCTTTACGAAGCTGTGC 54003
>seq636
Length=763551
Score = 102 bits (112), Expect = 5e-17
Identities = 141/195 (72%), Gaps = 8/195 (4%)
Strand=Plus/Plus
Query 34787 TCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAG 34846
|| ||||| ||||| ||||| || || | || |||| || || ||||| || || ||
Sbjct 54709 TCTTTCTGGATGTTGTAGTCGGACAGAGTACGACCATCCTCGAGCTGCTTGCCTGCAAAA 54768
Query 34847 ATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGAT 34906
||||| || |||||||| | || | ||||||||||| | || || ||||| ||
Sbjct 54769 ATCAGGCGCTGCTGGTCAGGTGGGATACCCTCCTTGTCCTGGATCTTCGACTTGAC--AT 54826
Query 34907 GCTATCGAT----TCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTT 34962
| ||||| || ||| |||||| || | ||| |||||||| || ||||| |||||
Sbjct 54827 --TGTCGATGGTGTCGCTGGACTCGACCTCGAGGGTGATGGTCTTGCCGGTGAGAGTCTT 54884
Query 34963 TACAAAGATCTGCAT 34977
|| |||||||||||
Sbjct 54885 GACGAAGATCTGCAT 54899
Score = 100 bits (110), Expect = 2e-16
Identities = 150/213 (70%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 34765 CAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATC 34824
||| |||| ||| | ||| ||||||||| ||||| || ||||| || | || | ||
Sbjct 54459 CAGCACCAAGTGCAGAGTGGACTCCTTCTGGATGTTGTAATCCGAAAGTGTCCGGCCGTC 54518
Query 34825 GTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884
|| || ||||| ||||||||||| || || |||||||| | || | |||||||||||
Sbjct 54519 CTCAAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCCGGTGGGATGCCCTCCTTGTC 54578
Query 34885 GTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGT 34944
| || ||| |||||| | |||| || | || || || | || |||||
Sbjct 54579 TTGGATCTTTGACTTGACGTTGTCGATCGTGTCGGATGATTCCACTTCGAGTGTGATGGT 54638
Query 34945 CTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
||| || ||||| ||||| || || || |||||
Sbjct 54639 CTTGCCGGTGAGTGTCTTGACGAAAATTTGCAT 54671
Score = 89.7 bits (98), Expect = 3e-13
Identities = 91/119 (76%), Gaps = 0/119 (0%)
Strand=Plus/Plus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
||||| || || | |||||||||||||||||||| ||||| || ||| |||| | ||
Sbjct 54916 AGGACGAGATGGAGAGTGCTCTCCTTCTGAATGTTGTAGTCGGACAGGGTGCGACCGTCC 54975
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884
|| || ||||| || ||||| |||| ||||||||||| | || | || ||||| ||
Sbjct 54976 TCGAGCTGCTTGCCTGCGAAAATCAAGCGTTGCTGGTCAGGTGGAATGCCTTCCTTATC 55034
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 325690188147302
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |