Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236745.1_202017-07- 28] 658 sequences; 37,414,534 total letters Query= NC_022761.1 Length=146193 Score E Sequences producing significant alignments: (Bits) Value seq233 84.2 2e-11 >seq233 Length=416314 Score = 84.2 bits (92), Expect = 2e-11 Identities = 321/491 (65%), Gaps = 35/491 (7%) Strand=Plus/Minus Query 36685 ACGCATGGATCTTGTTAAGAAAGCATATTGGGTTCTCAGTAATCTTTACATTACTGTAGC 36744 ||| |||||||| |||||| |||| || |||| | || || | ||||| || | ||| Sbjct 224849 ACGTATGGATCTCGTTAAGGAAGCTTACTGGGCAATGAGCAACATGTACATGACAGCAGC 224790 Query 36745 TACACCCACAATGGGGAATGCAGGTAGACCAGATGGTCAGTTAAG-CTCG---TGTTTCA 36800 |||||| || ||| ||||| || | | || ||| | | || ||| || |||| Sbjct 224789 TACACCTACGATGTCCAATGCGGGCAAAAAAG-TGGCCGGACAACTCTCCAGCTGCTTCA 224731 Query 36801 TTGGAACAGTAGAAGATTCCCTAGACAATATCTATGATAATAACAAAGATTCAGCTATGG 36860 ||| || || || |||||||| || |||| ||| |||| ||| ||| | Sbjct 224730 TTGATACCGTGGACGATTCCCTTGAGGGCATCTTCGATTCCAACACTGATGTAGC----G 224675 Query 36861 TGTCTAAGT----TTGGTGGGGGTATCGGGGTTTACATGGGTAAAATCCGTTCACTCAAC 36916 |||| || | || || || ||||| |||||| | |||||| || | | | | Sbjct 224674 CGTCTCAGCAAAATGGGCGGCGGCATCGGCGTTTACCTCGGTAAAGTCAGAGCTCGCG-- 224617 Query 36917 AGTT---ACATCCGTGGTATGAAAGGTA-AGTCTCAAGGTGTTATCCCTTGGAT---CAA 36969 ||| ||||||| ||| ||| || | ||| || || ||||||||||| | | Sbjct 224616 -GTTCGGACATCCGGGGTCACAAAAATACAAGCTCT-GGCGTAATCCCTTGGATTCGCCA 224559 Query 36970 AGGGCTTGAAAATACAGCAAATAGTGTAGACCAGCTAGGTCAGCGTAAAGGTGCTATTGC 37029 | || | ||||| || || ||||||||||| || ||||||||||| || || Sbjct 224558 A---CTAAATAATACTGCGGTCAGCGTAGACCAGCTTGGAACACGTAAAGGTGCGATCGC 224502 Query 37030 AGTTTACCTAGACATCTGGCATAAGGATGTTATGGAATTCCTGCAAATTGGTACT-AATA 37088 ||||| || ||| | | || || || | ||| ||||| | | || || || | Sbjct 224501 CGTTTATCTGGACGTTTTCCACAAAGACATCTTGGCCTTCCT-CGATCTGAAGCTCAACA 224443 Query 37089 ACGGGGATGA---GAGACGTAAAGCACGTGACGTATTCCCAGGCTTATGTGTACCAGACC 37145 | || || || || ||| || | ||||||||||| ||| | || | || |||| Sbjct 224442 ATGGTGACGAGCGGATGCGT---GCGCATGACGTATTCCACGGCATCTGCCTGCCTGACC 224386 Query 37146 TTTTCATGGAG 37156 | ||||||||| Sbjct 224385 TGTTCATGGAG 224375 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 467685753253040