Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236745.1_202017-07-
28] 658 sequences; 37,414,534 total letters
Query= NC_022767.1
Length=81656
Score E
Sequences producing significant alignments: (Bits) Value
seq233 152 3e-32
>seq233
Length=416314
Score = 152 bits (168), Expect = 3e-32
Identities = 407/615 (66%), Gaps = 28/615 (5%)
Strand=Plus/Plus
Query 63341 CGAAGTATTCACCTGTTTCCCATTCAGAACCTTCGAATAATGGATATTCTTCTTTCTCTT 63400
||||||||| ||||||| ||| || ||||||| |||| ||||| | | |||| || |
Sbjct 223585 CGAAGTATTTGCCTGTTTGCCAATCGGAACCTTGGAATTTCGGATAATGTCCTTTTTCCT 223644
Query 63401 TCGCCAATTTCATACTAGCTTTGATGGTATAATAAGCAATATCTTCGTACAAACTATCGT 63460
| | || || ||| || ||||| | | ||| ||| | ||| |||| | ||||||
Sbjct 223645 TGGACAGTTCCATGCTGGCTTTCACGAGCAGATAGTTAATTTTTTCATACAGATTATCGT 223704
Query 63461 TAAAATCTACTGCTTCTTGTGTTTCCCATCTGATCTTTTTCTGAACAAGTAGATCGTGTA 63520
|| | |||||||||| | |||||| | || || || |||| || | || |
Sbjct 223705 TATATGTGACTGCTTCTTCCGATTCCCAACGAATGCCTTCGAGAGCAAGCAGGTGATGGA 223764
Query 63521 GACCATATGTTCCTAAACCAATAGCACGGTAACGTTTGTTAGTGTATT----TAGCAACA 63576
| || ||||||| | ||||| |||||||| | |||| ||||||| | ||| ||
Sbjct 223765 GTCCGAATGTTCCCAGACCAACCGCACGGTATTGGCTGTTGGTGTATTGGGCTTGCAGCA 223824
Query 63577 GCTAAAGGTAAATCGTTAAGATCGATAACGTTATCCAGCATACGAACCTGGATGTTAATT 63636
| || || ||| | ||||| ||||| || |||||||||||||| || |
Sbjct 223825 CTTCAATGTT----GTTGATGTCGATTACGTTGTCTAGCATACGAACCTGAATCGGTACC 223880
Query 63637 AATCGTTCTAACACATCATCAGTAACAGCACGAGCTAAGTTAATGGAAGACAAGTTACAT 63696
| || || || ||||||| || || ||||| || |||| |||||| || || |||
Sbjct 223881 AGACGCTCCAATACATCATGAGGCACGGCACGTGCCAAGTGAATGGAGTTCAGATTGCAT 223940
Query 63697 ACTACCATATCACCTAATACTTT----TTCTTGAGTC--GAACGGCC-TGTTT--TT--- 63744
||||| | ||| || ||||| || || | | | || | ||| ||
Sbjct 223941 ACTACGAAATCGCCCGGCACTTTGGAAATCACGATGCGGGTTTGTCCATCTTTGGTTACG 224000
Query 63745 AGGTCTAATTTTTCATCAAGGTAATAAGTTTGTGATTGGTTTTGTGTAATTTCTGTACAT 63804
|| ||| |||||| | | ||| |||||||| || | ||||| |||||
Sbjct 224001 AGCTCTTCCTTTTCAACTA------CCGTTGCAGATTGGTTCTGCATGATTTCAGTACAA 224054
Query 63805 AAGTTAGAGCAGTAAATCATACC-TTTATGTTTTTGTGAGTTCTCACGGTTAACTTGGTC 63863
| ||| || |||| | ||| || | | || || || ||| |||||| || ||
Sbjct 224055 AGGTTGGAAGAGTACACCATGCCGTGTGCATTGTTCGGA-TTCGAACGGTTGACGGTATC 224113
Query 63864 ACGATAGAACATATATGGTGTACCTGTTTCCAATTGAGAACGCATGATACCCTTCATAAT 63923
|| |||||||| || || ||||||||||||| ||| || ||||| || ||||| ||
Sbjct 224114 CCGGTAGAACATGTAAGGCGTACCTGTTTCCAGTTGGGACTTCATGACACGTTTCATGAT 224173
Query 63924 GTCAATAGCAGGAAC 63938
|||||| || ||||
Sbjct 224174 GTCAATCGCCTGAAC 224188
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 261172305544546
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |