Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236745.1_202017-07-
28] 658 sequences; 37,414,534 total letters
Query= NC_022771.1
Length=156648
Score E
Sequences producing significant alignments: (Bits) Value
seq97 141 9e-29
>seq97
Length=18159
Score = 141 bits (156), Expect = 9e-29
Identities = 395/593 (67%), Gaps = 21/593 (4%)
Strand=Plus/Plus
Query 90323 GCTGCGGACTGGTCTAAACCAGACGATGACTTTACACAGATGTTTTACAACCAGAATGTC 90382
|||| | ||||| | | |||| ||||| || |||| ||||| | || |||||| |
Sbjct 17315 GCTGTGAACTGGAATCGAGCAGATGATGATTTCACACTCATGTTCTGGAATCAGAATATT 17374
Query 90383 AAACAGTTCTGGCTCCCAGAAGAAATTGCCCTTAACGG-TGACTTGCTTACTTGGAAGAA 90441
| || || ||| | || || ||| || ||| | | ||| | || ||| |
Sbjct 17375 ATGCAATTTTGGACCGATGACGAGATT-CCTTTATCCGATGATAAAATGACCTGGGGCAT 17433
Query 90442 TCTTAGTG-TACAGGAACAAGATACTTATATGAAGGTTCTGGCTGGTCTTACATTACTAG 90500
|| |||| ||||| || |||| |||||||||| ||| ||| || || || | || |
Sbjct 17434 GCTCAGTGATACAGAAA-AAGACGCTTATATGAAAGTTTTGGGAGGCCTAACCCTTCTGG 17492
Query 90501 ACACGGAGCAGGGGAACACAGGGATTCCTACCATTGCTGAACATATAAACGGACACCAGC 90560
| || ||||| ||| || || ||| || ||| | | |||| ||||
Sbjct 17493 ATACCATTCAGGGCGGTGTAGGTATGCCGCAGATTATGGAGCATGTGGATGGACTACAGC 17552
Query 90561 GAAAAGCCGTACTGAACTTCATGGCTATGATGGAAAACTCGGTGCATGCTAAATCGTACA 90620
| || || ||||||| ||| ||||| ||||||||| | | ||||| ||||| ||||
Sbjct 17553 GCAAGGCTGTACTGAGCTTTATGGCGATGATGGAACAAA---TTCATGCGAAATCCTACA 17609
Query 90621 GCAACATTTTCCTTACATTAGCACCTACTGAGAAAATTAATGAAGTATTCGAGTGGGTT- 90679
||| ||||| |||||| || | || ||| ||||| | | ||||| | |||||
Sbjct 17610 GCAGTATTTTTACTACATTGGCCTCAACCGAGGAAATTGACAATGTATTTAAATGGGTGG 17669
Query 90680 AAGAACAACAAATATCTTCAAAAGAAAGCGAAGATCATTGTATCTGT-TTACGAGAGTAT 90738
||||| | | | ||||| |||| ||||||| | | || || || ||| || ||
Sbjct 17670 AAGAAAATCCA-TATCTGCAAACCAAAGCGACGGTTATACG-TCAGTATTATATGAACAT 17727
Query 90739 TGAAAAAGGTAATGATGCTTCACTATTTATGGCTCTAGTAGCGTCTGTGTTCCTTGAAAG 90798
||||| || ||| ||| |||||| | | || || || | | |||||
Sbjct 17728 TGAAACTTCAAAAGATT------TATATATGGCGATGGCCGCTTCCGTACTTTTGGAAAG 17781
Query 90799 TTTCTTGTTCTACAGCGGATTCTACTACCCGTTATACTTCTATGGTCAAGGTAAACTCA- 90857
|| ||||| ||||||||||||| |||||| | || || ||| |||||||||||||
Sbjct 17782 TTATTTGTTTTACAGCGGATTCTTCTACCCACTCTATTTAGCTGGACAAGGTAAACTCAC 17841
Query 90858 -TGCAGTCAGGAGAAATTATCAACCTGATTATCCGGGATGAAGCAATTCATGG 90909
|||||| || || || || | |||||| | ||||||||| ||||||||
Sbjct 17842 CTGCAGT--GGTGAGATCATTGATCTGATTCTGCGGGATGAAAGTATTCATGG 17892
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 501141478077440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |