Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236745.1_202017-07-
28] 658 sequences; 37,414,534 total letters
Query= NC_023587.1
Length=189311
Score E
Sequences producing significant alignments: (Bits) Value
seq629 91.5 2e-13
seq8 89.7 6e-13
>seq629
Length=126711
Score = 91.5 bits (100), Expect = 2e-13
Identities = 65/75 (87%), Gaps = 0/75 (0%)
Strand=Plus/Plus
Query 152501 TGTCTCAGTAGCTCAGATGGATAGAGCAATTCACTTCTAATGAATTGGTCGGGGGTTCGA 152560
|||||||||||||||| |||||||||||| | ||||||| | | ||||||||||||||
Sbjct 52367 TGTCTCAGTAGCTCAGCTGGATAGAGCAACGCCCTTCTAAGGCGTCGGTCGGGGGTTCGA 52426
Query 152561 GTCCCTCCTGAGACG 152575
||||||||| ||||
Sbjct 52427 ATCCCTCCTGGGACG 52441
>seq8
Length=58653
Score = 89.7 bits (98), Expect = 6e-13
Identities = 166/240 (69%), Gaps = 14/240 (6%)
Strand=Plus/Plus
Query 152499 TTTGTCTCAGTAGCTCAGATGGATAGAGCAATTCACTTCTAATGAATTGGTCGGGGGTTC 152558
|||| ||| |||||||| ||| ||||||| | |||| |||| | |||| |||||
Sbjct 27363 TTTGAGTCATTAGCTCAGTTGG-TAGAGCACCTGACTTTTAATCAGGGTGTCGAAGGTTC 27421
Query 152559 GAGTCCCTCCTGAGACGCCTTGT----CG-GTATGGCGGAATTGGTAGACGCGCTGGTTT 152613
||| || || ||| | || | || || |||||||||||| |||||| || | |
Sbjct 27422 GAGCCCTTCATGACTCACCATCATATGCGCGTGTGGCGGAATTGGCAGACGCACTAGACT 27481
Query 152614 TAGGTACCAGTGTCTTATGACGTGGAGGTTCAAGTCCTCTTACCGACACTCGCTCGAA-- 152671
|||| | || ||||| |||||||| ||||||||||| || || | | ||
Sbjct 27482 TAGGATCTAGCGTCTT-TGACGTGGGGGTTCAAGTCCCTCCACGCGCATCCTTTATAAGC 27540
Query 152672 -----TAGCTCAGAGGTAGAGCACCTCCTTTACACGGAGATTGTCGGGGGTTCGATCCCC 152726
| |||||| ||||||||| | |||| || || || |||| ||||||||| |||
Sbjct 27541 GGACGTGGCTCAGCGGTAGAGCATCGCCTTGCCAAGGCGAGGGTCGCGGGTTCGATTCCC 27600
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 605662218387280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |