Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236745.1_202017-07- 28] 658 sequences; 37,414,534 total letters Query= NC_023587.1 Length=189311 Score E Sequences producing significant alignments: (Bits) Value seq629 91.5 2e-13 seq8 89.7 6e-13 >seq629 Length=126711 Score = 91.5 bits (100), Expect = 2e-13 Identities = 65/75 (87%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 152501 TGTCTCAGTAGCTCAGATGGATAGAGCAATTCACTTCTAATGAATTGGTCGGGGGTTCGA 152560 |||||||||||||||| |||||||||||| | ||||||| | | |||||||||||||| Sbjct 52367 TGTCTCAGTAGCTCAGCTGGATAGAGCAACGCCCTTCTAAGGCGTCGGTCGGGGGTTCGA 52426 Query 152561 GTCCCTCCTGAGACG 152575 ||||||||| |||| Sbjct 52427 ATCCCTCCTGGGACG 52441 >seq8 Length=58653 Score = 89.7 bits (98), Expect = 6e-13 Identities = 166/240 (69%), Gaps = 14/240 (6%) Strand=Plus/Plus Query 152499 TTTGTCTCAGTAGCTCAGATGGATAGAGCAATTCACTTCTAATGAATTGGTCGGGGGTTC 152558 |||| ||| |||||||| ||| ||||||| | |||| |||| | |||| ||||| Sbjct 27363 TTTGAGTCATTAGCTCAGTTGG-TAGAGCACCTGACTTTTAATCAGGGTGTCGAAGGTTC 27421 Query 152559 GAGTCCCTCCTGAGACGCCTTGT----CG-GTATGGCGGAATTGGTAGACGCGCTGGTTT 152613 ||| || || ||| | || | || || |||||||||||| |||||| || | | Sbjct 27422 GAGCCCTTCATGACTCACCATCATATGCGCGTGTGGCGGAATTGGCAGACGCACTAGACT 27481 Query 152614 TAGGTACCAGTGTCTTATGACGTGGAGGTTCAAGTCCTCTTACCGACACTCGCTCGAA-- 152671 |||| | || ||||| |||||||| ||||||||||| || || | | || Sbjct 27482 TAGGATCTAGCGTCTT-TGACGTGGGGGTTCAAGTCCCTCCACGCGCATCCTTTATAAGC 27540 Query 152672 -----TAGCTCAGAGGTAGAGCACCTCCTTTACACGGAGATTGTCGGGGGTTCGATCCCC 152726 | |||||| ||||||||| | |||| || || || |||| ||||||||| ||| Sbjct 27541 GGACGTGGCTCAGCGGTAGAGCATCGCCTTGCCAAGGCGAGGGTCGCGGGTTCGATTCCC 27600 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 605662218387280