Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236745.1_202017-07-
28] 658 sequences; 37,414,534 total letters
Query= NC_026926.1
Length=192108
Score E
Sequences producing significant alignments: (Bits) Value
seq8 109 7e-19
seq629 84.2 3e-11
>seq8
Length=58653
Score = 109 bits (120), Expect = 7e-19
Identities = 169/238 (71%), Gaps = 15/238 (6%)
Strand=Plus/Plus
Query 158076 TGACTCAGTAGCTCAGTTGGATAGAGCAACTGCCTTCTAAGCAGTCGGTCGTTGGTTCGA 158135
||| ||| |||||||||||| ||||||| ||| ||| ||| ||| |||| |||||||
Sbjct 27365 TGAGTCATTAGCTCAGTTGG-TAGAGCACCTGACTTTTAATCAGGGTGTCGAAGGTTCGA 27423
Query 158136 GTCCAACCTGAGTCGCCAGT-----CG-GTATGGCGGAATTGGTAGACGCGCCAGGTTTA 158189
| || | ||| || ||| || || |||||||||||| |||||| | || |||
Sbjct 27424 GCCCTTCATGACTCACCATCATATGCGCGTGTGGCGGAATTGGCAGACGCACTAGACTTA 27483
Query 158190 GGTTCTGGTGTCTTATGACGTGGAGGTTCAAGTCCTCTTACCGACACTCGCTCGAA---- 158245
|| ||| | ||||| |||||||| ||||||||||| || || | | ||
Sbjct 27484 GGATCTAGCGTCTT-TGACGTGGGGGTTCAAGTCCCTCCACGCGCATCCTTTATAAGCGG 27542
Query 158246 ---TAGCTCAGAGGTAGAGCACCTCCTTTACACGGAGATTGTCGGGGGTTCGATCCCC 158300
| |||||| ||||||||| | |||| || || || |||| ||||||||| |||
Sbjct 27543 ACGTGGCTCAGCGGTAGAGCATCGCCTTGCCAAGGCGAGGGTCGCGGGTTCGATTCCC 27600
>seq629
Length=126711
Score = 84.2 bits (92), Expect = 3e-11
Identities = 67/81 (83%), Gaps = 0/81 (0%)
Strand=Plus/Minus
Query 158065 TTAAAAAGATATGACTCAGTAGCTCAGTTGGATAGAGCAACTGCCTTCTAAGCAGTCGGT 158124
||| | | || || ||||||||||||| |||||||||||| ||||||||||| ||||||
Sbjct 60106 TTATACATATTTGTCTCAGTAGCTCAGCAGGATAGAGCAACGGCCTTCTAAGCCGTCGGT 60047
Query 158125 CGTTGGTTCGAGTCCAACCTG 158145
|| ||||||| ||| ||||
Sbjct 60046 CGGGGGTTCGAATCCCTCCTG 60026
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 614612544770240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |