Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236745.1_202017-07- 28] 658 sequences; 37,414,534 total letters Query= NC_026926.1 Length=192108 Score E Sequences producing significant alignments: (Bits) Value seq8 109 7e-19 seq629 84.2 3e-11 >seq8 Length=58653 Score = 109 bits (120), Expect = 7e-19 Identities = 169/238 (71%), Gaps = 15/238 (6%) Strand=Plus/Plus Query 158076 TGACTCAGTAGCTCAGTTGGATAGAGCAACTGCCTTCTAAGCAGTCGGTCGTTGGTTCGA 158135 ||| ||| |||||||||||| ||||||| ||| ||| ||| ||| |||| ||||||| Sbjct 27365 TGAGTCATTAGCTCAGTTGG-TAGAGCACCTGACTTTTAATCAGGGTGTCGAAGGTTCGA 27423 Query 158136 GTCCAACCTGAGTCGCCAGT-----CG-GTATGGCGGAATTGGTAGACGCGCCAGGTTTA 158189 | || | ||| || ||| || || |||||||||||| |||||| | || ||| Sbjct 27424 GCCCTTCATGACTCACCATCATATGCGCGTGTGGCGGAATTGGCAGACGCACTAGACTTA 27483 Query 158190 GGTTCTGGTGTCTTATGACGTGGAGGTTCAAGTCCTCTTACCGACACTCGCTCGAA---- 158245 || ||| | ||||| |||||||| ||||||||||| || || | | || Sbjct 27484 GGATCTAGCGTCTT-TGACGTGGGGGTTCAAGTCCCTCCACGCGCATCCTTTATAAGCGG 27542 Query 158246 ---TAGCTCAGAGGTAGAGCACCTCCTTTACACGGAGATTGTCGGGGGTTCGATCCCC 158300 | |||||| ||||||||| | |||| || || || |||| ||||||||| ||| Sbjct 27543 ACGTGGCTCAGCGGTAGAGCATCGCCTTGCCAAGGCGAGGGTCGCGGGTTCGATTCCC 27600 >seq629 Length=126711 Score = 84.2 bits (92), Expect = 3e-11 Identities = 67/81 (83%), Gaps = 0/81 (0%) Strand=Plus/Minus Query 158065 TTAAAAAGATATGACTCAGTAGCTCAGTTGGATAGAGCAACTGCCTTCTAAGCAGTCGGT 158124 ||| | | || || ||||||||||||| |||||||||||| ||||||||||| |||||| Sbjct 60106 TTATACATATTTGTCTCAGTAGCTCAGCAGGATAGAGCAACGGCCTTCTAAGCCGTCGGT 60047 Query 158125 CGTTGGTTCGAGTCCAACCTG 158145 || ||||||| ||| |||| Sbjct 60046 CGGGGGTTCGAATCCCTCCTG 60026 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 614612544770240