Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236745.1_202017-07- 28] 658 sequences; 37,414,534 total letters Query= NC_026928.1 Length=189418 Score E Sequences producing significant alignments: (Bits) Value seq8 109 7e-19 seq629 82.4 9e-11 >seq8 Length=58653 Score = 109 bits (120), Expect = 7e-19 Identities = 169/238 (71%), Gaps = 15/238 (6%) Strand=Plus/Plus Query 154257 TGACTCAGTAGCTCAGTTGGATAGAGCAACTGCCTTCTAAGCAGTCGGTCGTTGGTTCGA 154316 ||| ||| |||||||||||| ||||||| ||| ||| ||| ||| |||| ||||||| Sbjct 27365 TGAGTCATTAGCTCAGTTGG-TAGAGCACCTGACTTTTAATCAGGGTGTCGAAGGTTCGA 27423 Query 154317 GTCCAACCTGAGTCGCCAGT-----CG-GTATGGCGGAATTGGTAGACGCGCCAGGTTTA 154370 | || | ||| || ||| || || |||||||||||| |||||| | || ||| Sbjct 27424 GCCCTTCATGACTCACCATCATATGCGCGTGTGGCGGAATTGGCAGACGCACTAGACTTA 27483 Query 154371 GGTTCTGGTGTCTTATGACGTGGAGGTTCAAGTCCTCTTACCGACACTCGCTCGAA---- 154426 || ||| | ||||| |||||||| ||||||||||| || || | | || Sbjct 27484 GGATCTAGCGTCTT-TGACGTGGGGGTTCAAGTCCCTCCACGCGCATCCTTTATAAGCGG 27542 Query 154427 ---TAGCTCAGAGGTAGAGCACCTCCTTTACACGGAGATTGTCGGGGGTTCGATCCCC 154481 | |||||| ||||||||| | |||| || || || |||| ||||||||| ||| Sbjct 27543 ACGTGGCTCAGCGGTAGAGCATCGCCTTGCCAAGGCGAGGGTCGCGGGTTCGATTCCC 27600 >seq629 Length=126711 Score = 82.4 bits (90), Expect = 9e-11 Identities = 66/80 (83%), Gaps = 0/80 (0%) Strand=Plus/Plus Query 154255 CATGACTCAGTAGCTCAGTTGGATAGAGCAACTGCCTTCTAAGCAGTCGGTCGTTGGTTC 154314 |||| ||||||||||||| ||||||||||||| ||||||||| |||||||| ||||| Sbjct 52365 CATGTCTCAGTAGCTCAGCTGGATAGAGCAACGCCCTTCTAAGGCGTCGGTCGGGGGTTC 52424 Query 154315 GAGTCCAACCTGAGTCGCCA 154334 || ||| |||| | || || Sbjct 52425 GAATCCCTCCTGGGACGTCA 52444 Score = 82.4 bits (90), Expect = 9e-11 Identities = 60/70 (86%), Gaps = 0/70 (0%) Strand=Plus/Minus Query 154257 TGACTCAGTAGCTCAGTTGGATAGAGCAACTGCCTTCTAAGCAGTCGGTCGTTGGTTCGA 154316 || ||||||||||||| |||||||||||| ||||||||||| |||||||| ||||||| Sbjct 60095 TGTCTCAGTAGCTCAGCAGGATAGAGCAACGGCCTTCTAAGCCGTCGGTCGGGGGTTCGA 60036 Query 154317 GTCCAACCTG 154326 ||| |||| Sbjct 60035 ATCCCTCCTG 60026 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 606004615571040