Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236745.1_202017-07- 28] 658 sequences; 37,414,534 total letters Query= NC_027402.1 Length=240413 Score E Sequences producing significant alignments: (Bits) Value seq185 105 1e-17 >seq185 Length=9056 Score = 105 bits (116), Expect = 1e-17 Identities = 166/235 (71%), Gaps = 2/235 (1%) Strand=Plus/Minus Query 198365 TTCCTCGGCGTGCCGTTCAACATCGCGTCTTACGCATTACTCGTGCACATGGTTGCCCAG 198424 ||||| || |||| || ||||| || || ||||| | || ||| |||||||| Sbjct 5596 TTCCTGGGGCTGCCATTTAACATTGCCAGCTATGCATTGTTGACACATATGATTGCCCAG 5537 Query 198425 CAG-GTTAACATGGTGCCGGGCGATTTCATTTGGACGGGCGGTGACACACATCTCTACTC 198483 ||| || | | || | ||| || ||||| ||| | || || || ||| ||||||| Sbjct 5536 CAGTGTGATCTTGAAGT-GGGAGAGTTCATCTGGTCCGGTGGGGATGTACACATCTACTC 5478 Query 198484 TAATCATCTGGAGCAGGCCAAGCTCCAGCTGACGCGTGAGCCGTTACCTTTACCGAAACT 198543 || ||| |||| || | || |||| || |||||| || | | || || ||||| Sbjct 5477 AAACCATGTGGAACAAGTGAAAACCCAGTTGGAGCGTGAACCATACGCATTGCCTAAACT 5418 Query 198544 GATCATCAAGCGTAAACCGGAATCTATCTTCGATTATAAATTCGAAGATTTTGAG 198598 | ||||||||||||| ||||| || || || ||||||| || |||||||||||| Sbjct 5417 GGTCATCAAGCGTAAGCCGGATTCCATTTTTGATTATACGTTTGAAGATTTTGAG 5363 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 769187273382640