Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236745.1_202017-07-
28] 658 sequences; 37,414,534 total letters
Query= NC_028091.1
Length=196300
Score E
Sequences producing significant alignments: (Bits) Value
seq640 190 3e-43
seq653 89.7 6e-13
seq144 86.0 8e-12
seq244 82.4 1e-10
>seq640
Length=99942
Score = 190 bits (210), Expect = 3e-43
Identities = 884/1385 (64%), Gaps = 31/1385 (2%)
Strand=Plus/Plus
Query 110707 GTAGATGTTTGTTGTGTATGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGA 110766
||| ||||| |||||||||| || ||||| || ||| |||| ||| || | ||| ||
Sbjct 45175 GTAAATGTTGCTTGTGTATGGCTCGAAGCACTCGTTAAAGCCCATGATCTGCGAGGTCGA 45234
Query 110767 GGCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTCTCCTTGATGCGTTC 110826
|||||||||||| || || | | ||| ||| || | ||| | || ||| |
Sbjct 45235 GGCTGTTGGCATCGGCGCAACGAGAAGCGAGTTGCGCACACCGTGCTGGGCGATCTTGCC 45294
Query 110827 CTTGAGAACATCCCAGTCGTAGTTGAGCTTGGTTTCAC-CTT--CCCACATGTCAAACTG 110883
|||||| | ||||||| || || | ||| | ||| |||||||||| ||||
Sbjct 45295 CTTGAGTGCGGCCCAGTCCCAG---AGGTCGGTAGGAGTCTTGCCCCACATGTCGTACTG 45351
Query 110884 AAGCACCCCTTGGGACGCGGGAGAACCCTCAAAGGTTTCATAGGAACCTTGGGCTTC--A 110941
||| | || || || | ||||| || | || || || | ||| | ||||| |
Sbjct 45352 GAGCTCGCCCTGCGATACTGGAGAGCCTGGGTATGTCTCGTAAGGACC--GAGCTTCTCA 45409
Query 110942 GCCAATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTC 111001
|| | || || ||||| || | || ||||| ||||| ||||| || | |||
Sbjct 45410 GCAAGCTCGCATGAAGCCTCAAGAGCAGCATGATAGATGGTCTCAAAAATCTGGATATTA 45469
Query 111002 ATCTCCTTGGCTTCATCTGAATCAAATGCGTAGCGGCACAAAATAAATACATCCGCGAGA 111061
| ||||||||| ||| || || |||| |||| | || |||| || |||
Sbjct 45470 AGCTCCTTGGCCTCAGGCGAGTCGAATGGCATGCGGAGAGCCAAGAAGGCATCAGCAAGA 45529
Query 111062 CCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCA-AC 111120
|| | ||||| | |||||| |||| ||| || | || |||||| || ||| ||
Sbjct 45530 CCGTTGACACCAAGACCAATGGGTCGGTGGCGGAAGTTGCTCTTTCGTGCC-TCTGGTAC 45588
Query 111121 GGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTC 111180
|| || | || | || ||| ||| || || || || | || |||| ||
Sbjct 45589 TGGGTAGTAGTTGATCTCGATGGTCTTGTTCAGGTTACGTGTGACCACTTTGGTGACCTC 45648
Query 111181 ATGAAGTTTTTCATAATCAAAAGTGCGAGTCTCTTCATTGACATACTTTGGAAGGGCGAT 111240
|||||||| | | |||||| |||| | ||| || | || || || |
Sbjct 45649 GTGAAGTTTCTTGAAGTCAAAAACCTCGTTCTCGATGTCGACGTAGGTGGGCAGAGCAAG 45708
Query 111241 TGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACA 111300
|| |||| |||||| ||||| |||||| | | | |||||| | || || || ||
Sbjct 45709 CGAAGCCAGATTGCAGACAGCGACCTCATCTGGAGCAGAGTACTCCATGATCTCAGTGCA 45768
Query 111301 TAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTGTTGCACGCATC 111360
|| || || ||||| || || || | |||||| || || ||||| |||| || ||
Sbjct 45769 CAAATTAGAGCTCTTGATGGTGCCAAGATTCTTCTGATTGCTCTTGCGGTTGGCGGCGTC 45828
Query 111361 CTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATAGCCTTCCAAAC 111420
|||||| || ||| | || || || ||||| ||||| | | ||||||||| | ||| |
Sbjct 45829 CTTGTACAGAATGAAAGGTGTGCCGGTCTCGGTCTGCGCCTCGAGAATAGCATACCATAT 45888
Query 111421 ATCGGCGGCTGGTACAATGGCGTTGGCCCGTCCCTCCGC-CTCGTACTTTGTGTAGAGGG 111479
| || | || | | ||||| | ||| | | ||| || ||| ||
Sbjct 45889 TTTCTGAGCACGAACCGTCTCAC-GGCCCTTGCCTTCTCTCTCATAACGCTCGTACAGCT 45947
Query 111480 CTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTT-GTCTGGACAGAAAAGA 111538
| | ||||| ||||| | || || ||||| || || || || || || | |||
Sbjct 45948 CCTTGAACTCGTCACCGTAAACATCCGACAGACCAGG-GCATTCGTTGGGGCACATCAGA 46006
Query 111539 GACCATTGACCACCTTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAA 111598
| ||| || | || || |||| ||| || || || |||||||| || | |
Sbjct 46007 GTCCAAGTGCCGTTCTGTTCGACACGCTGCATAAAGAGATCGGGAATCCAGAGAGCGTAG 46066
Query 111599 AAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCC 111658
|| | ||| | ||| | ||||| | || ||||| || | || | ||||| |
Sbjct 46067 AACAAATCGCGCGCACGAACTTCTTCCTTTCCATGGTTCTTGCGAAGGTCCATGAACTGC 46126
Query 111659 ATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCCCTTTCGACGC------ 111712
|||| || || ||||| |||||||| |||| || | || || | |||||
Sbjct 46127 ATGACGTCTGCATGCCACGGCTCAAGGTAGATGGCAAAAGCACC---TGGACGCTTGTTG 46183
Query 111713 CCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCA 111772
||| | || | || || || || ||| |||| | || || |||||||| | || |||
Sbjct 46184 CCACCCTGGTCAACGTAACGAGCAGTGTTGTTATAGACTCGTAGCATTGGTACAAGACCG 46243
Query 111773 TCTGATTGACCATTTGTCCCCCGAAT--ACGAGATTTATTGGCTCTCACATCATGGATGT 111830
| ||| || ||||| || | ||| | ||| | |||| || | | || | |
Sbjct 46244 TTGGATGTGCCGTTTGTGCCGCCAATGTATGAGCCTG--TGGCCCTGATGTTGTGAACAT 46301
Query 111831 GCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGA 111890
| | |||||||| ||||| ||| ||||| ||||| | | || || | ||||
Sbjct 46302 GAAGACCAATACCGCCAGCGTTCTTGGAGATCATGGCACATATCTTGAGGGTATCGTAGA 46361
Query 111891 TACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTG 111950
|||| | || ||| ||||| |||| | | |||||| | | ||||| ||
Sbjct 46362 TACCATCAATGCTGTCATCCTTCATGGCCACCAAGAAGCAGGATGCTAGCTGCGCCTGTG 46421
Query 111951 GTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTTGG-GACATCTTG 112009
| ||||||||| |||| || ||||| | || || |||| ||| | ||||| | |
Sbjct 46422 GGGTACCAGCACTGAAAAGTGTTGGCGAAGCATGTGTGAAG-TACTTCAACGACATGTAG 46480
Query 112010 TCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATTGCGACCCGCATG 112069
| ||||||||| | | | |||||||||||||| || ||||||| || || ||||||
Sbjct 46481 TTGTATGTCTCAATCGCTGCTTCAATGTCTTCCCCATGAATGCCGACAGCCACACGCATG 46540
Query 112070 AACAT 112074
| |||
Sbjct 46541 ATCAT 46545
>seq653
Length=68970
Score = 89.7 bits (98), Expect = 6e-13
Identities = 340/528 (64%), Gaps = 12/528 (2%)
Strand=Plus/Plus
Query 11293 TTCATTGAGAAGGTTTGCCAACTCCGCACCAGAGAATCCAGTTGTTTGCTTGGCAATACT 11352
|||||| || || ||| |||| || ||||| |||||||| || || |||| ||||| |
Sbjct 20828 TTCATTCAGGAGATTTTCCAAATCTGCACCGGAGAATCCCGTAGTACGCTTCGCAATGAT 20887
Query 11353 CGCGAGACTGACATCTTCAGATAACTT-CTTGTCTCGGGCATGGACTCCCAAAATCTTCT 11411
| || | ||||||| | ||| | ||||| || | || ||| || || | |
Sbjct 20888 GTCCAGCTTCACATCTTTGG-TAAGTGGCTTGTTGCGTGAGTGTACTTTCAGAACCGCTT 20946
Query 11412 TGCGACCTCGCACACTTGGAAGACCCACTTGGATCTTGCGATCAAAACGACCCGGGCGAA 11471
||||||| ||| || || |||| || | || |||||||| || || || |
Sbjct 20947 CACGACCTCTCACGTCAGGGCGATCCACCGTAATTTGACGGTCAAAACGTCCTGGACGCA 21006
Query 11472 GGAGGGCGTCATCAAGGATATCCACGCGATTAGTGGCCGCAATAACCACAATGCCAGTCT 11531
| | ||| || || || || | || || || || |||| | | ||| || |
Sbjct 21007 GCAAGGCAGGGTCCAGAATGTCTGCACGGTTCGTAGCTGCAACGATGATAATACCT---T 21063
Query 11532 CATTGTCA---AAGCCATCCATCTCGGTGAGTAATTGATTAATTGTTTGTTCTCTCTCAT 11588
||||| | || |||||||| || ||| || || || | ||||||||| | || |
Sbjct 21064 CATTGGCTCCGAAACCATCCATTTCAACGAGCAACTGGTTGAGTGTTTGTTCACGTTCGT 21123
Query 11589 CATTTGCTGGCATACCACCAGCACTGCGTTGCTTGCCCACCGCATCAATCTCATCAATGA 11648
| | | | |||||||| || || || ||||||||||| ||||| || |
Sbjct 21124 CGTGACCACCACCAAGACCAGCACCACGCTGACGTCCTACCGCATCAATTTCATCGATAA 21183
Query 11649 AGACAATACATGGTTGATTTTCGCGGGCGATTTCAAAGAGATCGCGAACCCTTTTGGCAC 11708
||| |||||||| |||| || ||||||| | || || || | ||||
Sbjct 21184 AGATGATACATGGGGCGTTTTTCTTCGCATTTTCAAACAAGTCACGTACACGAGATGCAC 21243
Query 11709 CCACACCAACAAACATCTCCACAAAGTTTGCGGCAGAGCACTG--GATGAATGGGACATT 11766
| ||||| |||||||| || || |||| | | || | || || |||||| |||
Sbjct 21244 CGACACCGACAAACATTTCAACGAAGTCAGAACCGGA--AATGCTGAAGAATGGTACACC 21301
Query 11767 TGATTCACCCGCGATGGCTCGGGCGAGGAGGGTCTTTCCCGTACCTGG 11814
| ||||| || | || || ||||| | ||| || || ||||| ||
Sbjct 21302 CGCCTCACCGGCAACAGCACGAGCGAGCAAGGTTTTACCTGTACCCGG 21349
>seq144
Length=510160
Score = 86.0 bits (94), Expect = 8e-12
Identities = 135/188 (72%), Gaps = 4/188 (2%)
Strand=Plus/Plus
Query 122677 CCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCTGGCATGAGACCCCGCTTC 122736
|||||||| ||||| || || || || ||||| || || | ||||||||| || |||
Sbjct 267086 CCCTCATCACGGGAGATGAGCTCGTTCGAGAATGTGAGCCCGGCCATGAGACCACGTTTC 267145
Query 122737 TTCAACCAATAAATAGC-GCAGAATGACCCGGAGAAGAAGATACCCTCCACACACGCAAA 122795
|||| ||| | ||||| ||| || || || ||||||||||||||||| || |||||
Sbjct 267146 TTCAGCCAGAAGATAGCAGCAAAA-GATCCAGAGAAGAAGATACCCTCAACGGCGGCAAA 267204
Query 122796 CGCAAAAAGGCGTTCGGCGAAGGAGCGAG-ACTTTGCATCAAACCATTTCATTGCCCATT 122854
|||| || || |||||| | |||| ||| || || |||| || ||||| |
Sbjct 267205 TGCAATGAGACGGAGGGCGAATG-TCGAGTTCTTGTCAGAAATCCATCGCAACGCCCAGT 267263
Query 122855 TCGCCTTC 122862
||||||
Sbjct 267264 CAGCCTTC 267271
>seq244
Length=403494
Score = 82.4 bits (90), Expect = 1e-10
Identities = 147/208 (71%), Gaps = 10/208 (5%)
Strand=Plus/Minus
Query 182517 AGACCCTTGATGTGAGAACCATCATTATCGGCATCTGTCATAATCATAAGACGACCATAG 182576
||||||||||||||||| ||||| | ||| ||| ||||| ||||| ||| | |||||
Sbjct 323328 AGACCCTTGATGTGAGAGCCATCGTGATCCTGATCGGTCATGATCATCAGATGGCCATAA 323269
Query 182577 CG-AAG--TTCAGAAACATCTTGGTAGTCTTTTCCTTGTTGAAGACCAAGGATCTTCTTG 182633
|| ||| || || |||| |||||| || ||||| ||||| | | |||||||
Sbjct 323268 CGCAAGCCTTTAG---TATCTGTGTAGTCCTTCTTATGTTGCAGACCCAAAAACTTCTTG 323212
Query 182634 A-GATCATTGAA-CTCCTGGTTTGATGTAAGCTGTGCCACCGAAGCGTCCCGAACATTCT 182691
| | || |||| ||| ||| || || ||| | | ||||| || || |||||
Sbjct 323211 ATGTTC--TGAATCTCGGCGTTCTTTGAAATCTGGTCGATGGAAGCATCGCGCACATTGA 323154
Query 182692 TACATTTACCGCGAAGTGGGAACACACC 182719
| ||||| ||||||||||| |||||
Sbjct 323153 GAATCTTACCCCGAAGTGGGAAGACACC 323126
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 628026834436800
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