Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236745.1_202017-07- 28] 658 sequences; 37,414,534 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq640 190 3e-43 seq653 89.7 6e-13 seq144 86.0 8e-12 seq244 82.4 1e-10 >seq640 Length=99942 Score = 190 bits (210), Expect = 3e-43 Identities = 884/1385 (64%), Gaps = 31/1385 (2%) Strand=Plus/Plus Query 110707 GTAGATGTTTGTTGTGTATGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGA 110766 ||| ||||| |||||||||| || ||||| || ||| |||| ||| || | ||| || Sbjct 45175 GTAAATGTTGCTTGTGTATGGCTCGAAGCACTCGTTAAAGCCCATGATCTGCGAGGTCGA 45234 Query 110767 GGCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTCTCCTTGATGCGTTC 110826 |||||||||||| || || | | ||| ||| || | ||| | || ||| | Sbjct 45235 GGCTGTTGGCATCGGCGCAACGAGAAGCGAGTTGCGCACACCGTGCTGGGCGATCTTGCC 45294 Query 110827 CTTGAGAACATCCCAGTCGTAGTTGAGCTTGGTTTCAC-CTT--CCCACATGTCAAACTG 110883 |||||| | ||||||| || || | ||| | ||| |||||||||| |||| Sbjct 45295 CTTGAGTGCGGCCCAGTCCCAG---AGGTCGGTAGGAGTCTTGCCCCACATGTCGTACTG 45351 Query 110884 AAGCACCCCTTGGGACGCGGGAGAACCCTCAAAGGTTTCATAGGAACCTTGGGCTTC--A 110941 ||| | || || || | ||||| || | || || || | ||| | ||||| | Sbjct 45352 GAGCTCGCCCTGCGATACTGGAGAGCCTGGGTATGTCTCGTAAGGACC--GAGCTTCTCA 45409 Query 110942 GCCAATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTC 111001 || | || || ||||| || | || ||||| ||||| ||||| || | ||| Sbjct 45410 GCAAGCTCGCATGAAGCCTCAAGAGCAGCATGATAGATGGTCTCAAAAATCTGGATATTA 45469 Query 111002 ATCTCCTTGGCTTCATCTGAATCAAATGCGTAGCGGCACAAAATAAATACATCCGCGAGA 111061 | ||||||||| ||| || || |||| |||| | || |||| || ||| Sbjct 45470 AGCTCCTTGGCCTCAGGCGAGTCGAATGGCATGCGGAGAGCCAAGAAGGCATCAGCAAGA 45529 Query 111062 CCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCA-AC 111120 || | ||||| | |||||| |||| ||| || | || |||||| || ||| || Sbjct 45530 CCGTTGACACCAAGACCAATGGGTCGGTGGCGGAAGTTGCTCTTTCGTGCC-TCTGGTAC 45588 Query 111121 GGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTC 111180 || || | || | || ||| ||| || || || || | || |||| || Sbjct 45589 TGGGTAGTAGTTGATCTCGATGGTCTTGTTCAGGTTACGTGTGACCACTTTGGTGACCTC 45648 Query 111181 ATGAAGTTTTTCATAATCAAAAGTGCGAGTCTCTTCATTGACATACTTTGGAAGGGCGAT 111240 |||||||| | | |||||| |||| | ||| || | || || || | Sbjct 45649 GTGAAGTTTCTTGAAGTCAAAAACCTCGTTCTCGATGTCGACGTAGGTGGGCAGAGCAAG 45708 Query 111241 TGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACA 111300 || |||| |||||| ||||| |||||| | | | |||||| | || || || || Sbjct 45709 CGAAGCCAGATTGCAGACAGCGACCTCATCTGGAGCAGAGTACTCCATGATCTCAGTGCA 45768 Query 111301 TAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTGTTGCACGCATC 111360 || || || ||||| || || || | |||||| || || ||||| |||| || || Sbjct 45769 CAAATTAGAGCTCTTGATGGTGCCAAGATTCTTCTGATTGCTCTTGCGGTTGGCGGCGTC 45828 Query 111361 CTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATAGCCTTCCAAAC 111420 |||||| || ||| | || || || ||||| ||||| | | ||||||||| | ||| | Sbjct 45829 CTTGTACAGAATGAAAGGTGTGCCGGTCTCGGTCTGCGCCTCGAGAATAGCATACCATAT 45888 Query 111421 ATCGGCGGCTGGTACAATGGCGTTGGCCCGTCCCTCCGC-CTCGTACTTTGTGTAGAGGG 111479 | || | || | | ||||| | ||| | | ||| || ||| || Sbjct 45889 TTTCTGAGCACGAACCGTCTCAC-GGCCCTTGCCTTCTCTCTCATAACGCTCGTACAGCT 45947 Query 111480 CTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTT-GTCTGGACAGAAAAGA 111538 | | ||||| ||||| | || || ||||| || || || || || || | ||| Sbjct 45948 CCTTGAACTCGTCACCGTAAACATCCGACAGACCAGG-GCATTCGTTGGGGCACATCAGA 46006 Query 111539 GACCATTGACCACCTTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAA 111598 | ||| || | || || |||| ||| || || || |||||||| || | | Sbjct 46007 GTCCAAGTGCCGTTCTGTTCGACACGCTGCATAAAGAGATCGGGAATCCAGAGAGCGTAG 46066 Query 111599 AAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCC 111658 || | ||| | ||| | ||||| | || ||||| || | || | ||||| | Sbjct 46067 AACAAATCGCGCGCACGAACTTCTTCCTTTCCATGGTTCTTGCGAAGGTCCATGAACTGC 46126 Query 111659 ATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCCCTTTCGACGC------ 111712 |||| || || ||||| |||||||| |||| || | || || | ||||| Sbjct 46127 ATGACGTCTGCATGCCACGGCTCAAGGTAGATGGCAAAAGCACC---TGGACGCTTGTTG 46183 Query 111713 CCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCA 111772 ||| | || | || || || || ||| |||| | || || |||||||| | || ||| Sbjct 46184 CCACCCTGGTCAACGTAACGAGCAGTGTTGTTATAGACTCGTAGCATTGGTACAAGACCG 46243 Query 111773 TCTGATTGACCATTTGTCCCCCGAAT--ACGAGATTTATTGGCTCTCACATCATGGATGT 111830 | ||| || ||||| || | ||| | ||| | |||| || | | || | | Sbjct 46244 TTGGATGTGCCGTTTGTGCCGCCAATGTATGAGCCTG--TGGCCCTGATGTTGTGAACAT 46301 Query 111831 GCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGA 111890 | | |||||||| ||||| ||| ||||| ||||| | | || || | |||| Sbjct 46302 GAAGACCAATACCGCCAGCGTTCTTGGAGATCATGGCACATATCTTGAGGGTATCGTAGA 46361 Query 111891 TACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTG 111950 |||| | || ||| ||||| |||| | | |||||| | | ||||| || Sbjct 46362 TACCATCAATGCTGTCATCCTTCATGGCCACCAAGAAGCAGGATGCTAGCTGCGCCTGTG 46421 Query 111951 GTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTTGG-GACATCTTG 112009 | ||||||||| |||| || ||||| | || || |||| ||| | ||||| | | Sbjct 46422 GGGTACCAGCACTGAAAAGTGTTGGCGAAGCATGTGTGAAG-TACTTCAACGACATGTAG 46480 Query 112010 TCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATTGCGACCCGCATG 112069 | ||||||||| | | | |||||||||||||| || ||||||| || || |||||| Sbjct 46481 TTGTATGTCTCAATCGCTGCTTCAATGTCTTCCCCATGAATGCCGACAGCCACACGCATG 46540 Query 112070 AACAT 112074 | ||| Sbjct 46541 ATCAT 46545 >seq653 Length=68970 Score = 89.7 bits (98), Expect = 6e-13 Identities = 340/528 (64%), Gaps = 12/528 (2%) Strand=Plus/Plus Query 11293 TTCATTGAGAAGGTTTGCCAACTCCGCACCAGAGAATCCAGTTGTTTGCTTGGCAATACT 11352 |||||| || || ||| |||| || ||||| |||||||| || || |||| ||||| | Sbjct 20828 TTCATTCAGGAGATTTTCCAAATCTGCACCGGAGAATCCCGTAGTACGCTTCGCAATGAT 20887 Query 11353 CGCGAGACTGACATCTTCAGATAACTT-CTTGTCTCGGGCATGGACTCCCAAAATCTTCT 11411 | || | ||||||| | ||| | ||||| || | || ||| || || | | Sbjct 20888 GTCCAGCTTCACATCTTTGG-TAAGTGGCTTGTTGCGTGAGTGTACTTTCAGAACCGCTT 20946 Query 11412 TGCGACCTCGCACACTTGGAAGACCCACTTGGATCTTGCGATCAAAACGACCCGGGCGAA 11471 ||||||| ||| || || |||| || | || |||||||| || || || | Sbjct 20947 CACGACCTCTCACGTCAGGGCGATCCACCGTAATTTGACGGTCAAAACGTCCTGGACGCA 21006 Query 11472 GGAGGGCGTCATCAAGGATATCCACGCGATTAGTGGCCGCAATAACCACAATGCCAGTCT 11531 | | ||| || || || || | || || || || |||| | | ||| || | Sbjct 21007 GCAAGGCAGGGTCCAGAATGTCTGCACGGTTCGTAGCTGCAACGATGATAATACCT---T 21063 Query 11532 CATTGTCA---AAGCCATCCATCTCGGTGAGTAATTGATTAATTGTTTGTTCTCTCTCAT 11588 ||||| | || |||||||| || ||| || || || | ||||||||| | || | Sbjct 21064 CATTGGCTCCGAAACCATCCATTTCAACGAGCAACTGGTTGAGTGTTTGTTCACGTTCGT 21123 Query 11589 CATTTGCTGGCATACCACCAGCACTGCGTTGCTTGCCCACCGCATCAATCTCATCAATGA 11648 | | | | |||||||| || || || ||||||||||| ||||| || | Sbjct 21124 CGTGACCACCACCAAGACCAGCACCACGCTGACGTCCTACCGCATCAATTTCATCGATAA 21183 Query 11649 AGACAATACATGGTTGATTTTCGCGGGCGATTTCAAAGAGATCGCGAACCCTTTTGGCAC 11708 ||| |||||||| |||| || ||||||| | || || || | |||| Sbjct 21184 AGATGATACATGGGGCGTTTTTCTTCGCATTTTCAAACAAGTCACGTACACGAGATGCAC 21243 Query 11709 CCACACCAACAAACATCTCCACAAAGTTTGCGGCAGAGCACTG--GATGAATGGGACATT 11766 | ||||| |||||||| || || |||| | | || | || || |||||| ||| Sbjct 21244 CGACACCGACAAACATTTCAACGAAGTCAGAACCGGA--AATGCTGAAGAATGGTACACC 21301 Query 11767 TGATTCACCCGCGATGGCTCGGGCGAGGAGGGTCTTTCCCGTACCTGG 11814 | ||||| || | || || ||||| | ||| || || ||||| || Sbjct 21302 CGCCTCACCGGCAACAGCACGAGCGAGCAAGGTTTTACCTGTACCCGG 21349 >seq144 Length=510160 Score = 86.0 bits (94), Expect = 8e-12 Identities = 135/188 (72%), Gaps = 4/188 (2%) Strand=Plus/Plus Query 122677 CCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCTGGCATGAGACCCCGCTTC 122736 |||||||| ||||| || || || || ||||| || || | ||||||||| || ||| Sbjct 267086 CCCTCATCACGGGAGATGAGCTCGTTCGAGAATGTGAGCCCGGCCATGAGACCACGTTTC 267145 Query 122737 TTCAACCAATAAATAGC-GCAGAATGACCCGGAGAAGAAGATACCCTCCACACACGCAAA 122795 |||| ||| | ||||| ||| || || || ||||||||||||||||| || ||||| Sbjct 267146 TTCAGCCAGAAGATAGCAGCAAAA-GATCCAGAGAAGAAGATACCCTCAACGGCGGCAAA 267204 Query 122796 CGCAAAAAGGCGTTCGGCGAAGGAGCGAG-ACTTTGCATCAAACCATTTCATTGCCCATT 122854 |||| || || |||||| | |||| ||| || || |||| || ||||| | Sbjct 267205 TGCAATGAGACGGAGGGCGAATG-TCGAGTTCTTGTCAGAAATCCATCGCAACGCCCAGT 267263 Query 122855 TCGCCTTC 122862 |||||| Sbjct 267264 CAGCCTTC 267271 >seq244 Length=403494 Score = 82.4 bits (90), Expect = 1e-10 Identities = 147/208 (71%), Gaps = 10/208 (5%) Strand=Plus/Minus Query 182517 AGACCCTTGATGTGAGAACCATCATTATCGGCATCTGTCATAATCATAAGACGACCATAG 182576 ||||||||||||||||| ||||| | ||| ||| ||||| ||||| ||| | ||||| Sbjct 323328 AGACCCTTGATGTGAGAGCCATCGTGATCCTGATCGGTCATGATCATCAGATGGCCATAA 323269 Query 182577 CG-AAG--TTCAGAAACATCTTGGTAGTCTTTTCCTTGTTGAAGACCAAGGATCTTCTTG 182633 || ||| || || |||| |||||| || ||||| ||||| | | ||||||| Sbjct 323268 CGCAAGCCTTTAG---TATCTGTGTAGTCCTTCTTATGTTGCAGACCCAAAAACTTCTTG 323212 Query 182634 A-GATCATTGAA-CTCCTGGTTTGATGTAAGCTGTGCCACCGAAGCGTCCCGAACATTCT 182691 | | || |||| ||| ||| || || ||| | | ||||| || || ||||| Sbjct 323211 ATGTTC--TGAATCTCGGCGTTCTTTGAAATCTGGTCGATGGAAGCATCGCGCACATTGA 323154 Query 182692 TACATTTACCGCGAAGTGGGAACACACC 182719 | ||||| ||||||||||| ||||| Sbjct 323153 GAATCTTACCCCGAAGTGGGAAGACACC 323126 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628026834436800